Wildlife biology, big data, and reproducible research

Good enough practices in scientific computing

(2017) Greg Wilson et al.   PLoS Computational Biology

Our path to better science in less time using open data science tools

(2017) Julia S. Stewart Lowndes et al.   Nature Ecology & Evolution

Towards a more reproducible ecology

(2016) Michael Krabbe Borregaard et al.   ECOGRAPHY

Scaling-up camera traps: monitoring the planet's biodiversity with networks of remote sensors

(2016) Robin Steenweg et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Manipulations of black bear and coyote affect caribou calf survival

(2016) Keith P. Lewis et al.   JOURNAL OF WILDLIFE MANAGEMENT

Elevating The Status of Code in Ecology

(2016) K.A.S. Mislan et al.   TRENDS IN ECOLOGY & EVOLUTION

Integrated step selection analysis: bridging the gap between resource selection and animal movement

(2016) Tal Avgar et al.   Methods in Ecology and Evolution

Unveiling trade-offs in resource selection of migratory caribou using a mechanistic movement model of availability

(2015) Guillaume Bastille-Rousseau et al.   ECOGRAPHY

Ecological data sharing

(2015) William K. Michener   Ecological Informatics

The golden age of bio-logging: how animal-borne sensors are advancing the frontiers of ecology

(2015) Christopher C. Wilmers et al.   ECOLOGY

Statistics: P values are just the tip of the iceberg

(2015) Jeffrey T. Leek et al.   NATURE

Opinion: Reproducible research can still be wrong: Adopting a prevention approach: Fig. 1.

(2015) Jeffrey T. Leek et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Terrestrial animal tracking as an eye on life and planet

(2015) R. Kays et al.   SCIENCE

Archiving Primary Data: Solutions for Long-Term Studies

(2015) James A. Mills et al.   TRENDS IN ECOLOGY & EVOLUTION

The Tao of open science for ecology

(2015) Stephanie E. Hampton et al.   Ecosphere

A data management system for long-term natural resource monitoring and management projects with multiple cooperators

(2015) Victoria M. Hunt et al.   WILDLIFE SOCIETY BULLETIN

Practical guidance for integrating data management into long-term ecological monitoring projects

(2015) Robert D. Sutter et al.   WILDLIFE SOCIETY BULLETIN

A hidden Markov model for reconstructing animal paths from solar geolocation loggers using templates for light intensity

(2015) Eldar Rakhimberdiev et al.   Movement Ecology

Completing the data life cycle: using information management in macrosystems ecology research

(2014) Janine Rüegg et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Best Practices for Scientific Computing

(2014) Greg Wilson et al.   PLOS BIOLOGY

Spatially explicit models for inference about density in unmarked or partially marked populations

(2013) Richard B. Chandler et al.   Annals of Applied Statistics

A conceptual model for data management in the field of ecology

(2013) Javad Chamanara et al.   Ecological Informatics

Practical guidance on characterizing availability in resource selection functions under a use–availability design

(2013) Joseph M. Northrup et al.   ECOLOGY

How to Manage Data to Enhance Their Potential for Synthesis, Preservation, Sharing, and Reuse—A Great Lakes Case Study

(2013) Tracy L. Kolb et al.   FISHERIES

Big data and the future of ecology

(2013) Stephanie E Hampton et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

This I believe in genetics: discovery can be a nuisance, replication is science, implementation matters

(2013) John P. A. Ioannidis   Frontiers in Genetics

Cyberinfrastructure for Observatory and Monitoring Networks: A Case Study from the TEAM Network

(2012) Chaitan Baru et al.   BIOSCIENCE

Advanced Technologies and Data Management Practices in Environmental Science: Lessons from Academia

(2012) Rebecca R. Hernandez et al.   BIOSCIENCE

Practical advice for implementing long-term ecosystem monitoring

(2012) Christopher J. Sergeant et al.   JOURNAL OF APPLIED ECOLOGY

Ecoinformatics: supporting ecology as a data-intensive science

(2012) William K. Michener et al.   TRENDS IN ECOLOGY & EVOLUTION

GeoLight- processing and analysing light-based geolocator data inR

(2012) Simeon Lisovski et al.   Methods in Ecology and Evolution

Screening Global Positioning System Location Data for Errors Using Animal Movement Characteristics

(2011) KARI BJØRNERAAS et al.   JOURNAL OF WILDLIFE MANAGEMENT

Challenges and Opportunities of Open Data in Ecology

(2011) O. J. Reichman et al.   SCIENCE

Reproducible Research in Computational Science

(2011) R. D. Peng   SCIENCE

Data Archiving

(2010) Michael C. Whitlock et al.   AMERICAN NATURALIST

Wildlife tracking data management: a new vision

(2010) F. Urbano et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Reproducible research and Biostatistics

(2009) Roger D. Peng   BIOSTATISTICS

Considering ecological dynamics in resource selection functions

(2009) Philip D. McLoughlin et al.   JOURNAL OF ANIMAL ECOLOGY

Generalized estimating equations and generalized linear mixed-effects models for modelling resource selection

(2009) Nicola Koper et al.   JOURNAL OF APPLIED ECOLOGY

Distance software: design and analysis of distance sampling surveys for estimating population size

(2009) Len Thomas et al.   JOURNAL OF APPLIED ECOLOGY

Coyote Habitat Selection and Management Implications for the Gaspésie Caribou

(2009) Dominic Boisjoly et al.   JOURNAL OF WILDLIFE MANAGEMENT

A protocol for data exploration to avoid common statistical problems

(2009) Alain F. Zuur et al.   Methods in Ecology and Evolution

Guest Editors' Introduction: Reproducible Research

(2008) Sergey Fomel et al.   COMPUTING IN SCIENCE & ENGINEERING