Association of bacterial community types, functional microbial processes and lung disease in cystic fibrosis airways
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Association of bacterial community types, functional microbial processes and lung disease in cystic fibrosis airways
Authors
Keywords
-
Journal
ISME Journal
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-10-24
DOI
10.1038/s41396-021-01129-z
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- PICRUSt2 for prediction of metagenome functions
- (2020) Gavin M. Douglas et al. NATURE BIOTECHNOLOGY
- Lung function and microbiota diversity in cystic fibrosis
- (2020) Leah Cuthbertson et al. Microbiome
- Parallel Analysis of Cystic Fibrosis Sputum and Saliva Reveals Overlapping Communities and an Opportunity for Sample Decontamination
- (2020) Junnan Lu et al. mSystems
- Microbial Metabolites in Cystic Fibrosis: a Target for Future Therapy?
- (2019) Stefanie Widder et al. AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY
- Direct Lung Sampling Indicates That Established Pathogens Dominate Early Infections in Children with Cystic Fibrosis
- (2019) Peter Jorth et al. Cell Reports
- Nanopore metagenomics enables rapid clinical diagnosis of bacterial lower respiratory infection
- (2019) Themoula Charalampous et al. NATURE BIOTECHNOLOGY
- Mucin glycans attenuate the virulence of Pseudomonas aeruginosa in infection
- (2019) Kelsey M. Wheeler et al. Nature Microbiology
- Dietary Fiber Confers Protection against Flu by Shaping Ly6c − Patrolling Monocyte Hematopoiesis and CD8 + T Cell Metabolism
- (2018) Aurélien Trompette et al. IMMUNITY
- Cross-feeding modulates antibiotic tolerance in bacterial communities
- (2018) Elizabeth M. Adamowicz et al. ISME Journal
- Fluctuations in airway bacterial communities associated with clinical states and disease stages in cystic fibrosis
- (2018) Lisa A. Carmody et al. PLoS One
- Niche partitioning of a pathogenic microbiome driven by chemical gradients
- (2018) Robert A. Quinn et al. Science Advances
- Airway microbiota across age and disease spectrum in cystic fibrosis
- (2017) Edith T. Zemanick et al. EUROPEAN RESPIRATORY JOURNAL
- The MetaCyc database of metabolic pathways and enzymes
- (2017) Ron Caspi et al. NUCLEIC ACIDS RESEARCH
- Individual Patterns of Complexity in Cystic Fibrosis Lung Microbiota, Including Predator Bacteria, over a 1-Year Period
- (2017) Juan de Dios Caballero et al. mBio
- Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis
- (2017) Jaeyun Sung et al. Nature Communications
- Longitudinal sampling of the lung microbiota in individuals with cystic fibrosis
- (2017) Fiona J. Whelan et al. PLoS One
- Evidence and Role for Bacterial Mucin Degradation in Cystic Fibrosis Airway Disease
- (2016) Jeffrey M. Flynn et al. PLoS Pathogens
- Metabolic Model-Based Integration of Microbiome Taxonomic and Metabolomic Profiles Elucidates Mechanistic Links between Ecological and Metabolic Variation
- (2016) Cecilia Noecker et al. mSystems
- Ecological networking of cystic fibrosis lung infections
- (2016) Robert A Quinn et al. npj Biofilms and Microbiomes
- The Role of Short-Chain Fatty Acids, Produced by Anaerobic Bacteria, in the Cystic Fibrosis Airway
- (2015) Bojana Mirković et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- Regional Isolation Drives Bacterial Diversification within Cystic Fibrosis Lungs
- (2015) Peter Jorth et al. Cell Host & Microbe
- Culture-Based and Culture-Independent Bacteriologic Analysis of Cystic Fibrosis Respiratory Specimens
- (2015) Mona A. Mahboubi et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Pediatric Cystic Fibrosis Sputum Can Be Chemically Dynamic, Anoxic, and Extremely Reduced Due to Hydrogen Sulfide Formation
- (2015) Elise S. Cowley et al. mBio
- The daily dynamics of cystic fibrosis airway microbiota during clinical stability and at exacerbation
- (2015) Lisa A Carmody et al. Microbiome
- Mucin glycan foraging in the human gut microbiome
- (2015) Louise E. Tailford et al. Frontiers in Genetics
- Dynamics and associations of microbial community types across the human body
- (2014) Tao Ding et al. NATURE
- Biogeochemical Forces Shape the Composition and Physiology of Polymicrobial Communities in the Cystic Fibrosis Lung
- (2014) R. A. Quinn et al. mBio
- Unique microbial communities persist in individual cystic fibrosis patients throughout a clinical exacerbation
- (2013) Katherine E Price et al. Microbiome
- Prevalence of Streptococci and Increased Polymicrobial Diversity Associated with Cystic Fibrosis Patient Stability
- (2012) L. M. Filkins et al. JOURNAL OF BACTERIOLOGY
- Impact of Enhanced Staphylococcus DNA Extraction on Microbial Community Measures in Cystic Fibrosis Sputum
- (2012) Jiangchao Zhao et al. PLoS One
- Dirichlet Multinomial Mixtures: Generative Models for Microbial Metagenomics
- (2012) Ian Holmes et al. PLoS One
- The Adult Cystic Fibrosis Airway Microbiota Is Stable over Time and Infection Type, and Highly Resilient to Antibiotic Treatment of Exacerbations
- (2012) Anthony A. Fodor et al. PLoS One
- Direct sampling of cystic fibrosis lungs indicates that DNA-based analyses of upper-airway specimens can misrepresent lung microbiota
- (2012) A. F. Goddard et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Decade-long bacterial community dynamics in cystic fibrosis airways
- (2012) J. Zhao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Long-term cultivation-independent microbial diversity analysis demonstrates that bacterial communities infecting the adult cystic fibrosis lung show stability and resilience
- (2012) Franziska Anne Stressmann et al. THORAX
- Inferring Correlation Networks from Genomic Survey Data
- (2012) Jonathan Friedman et al. PLoS Computational Biology
- Bacterial cis-2-unsaturated fatty acids found in the cystic fibrosis airway modulate virulence and persistence of Pseudomonas aeruginosa
- (2011) Kate B Twomey et al. ISME Journal
- Effect of Sample Storage Conditions on Culture-Independent Bacterial Community Measures in Cystic Fibrosis Sputum Specimens
- (2011) J. Zhao et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies
- (2011) Patrick D. Schloss et al. PLoS One
- Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis
- (2010) Adam M Guss et al. ISME Journal
- Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities
- (2010) Christopher J van der Gast et al. ISME Journal
- Airway Microbiota and Pathogen Abundance in Age-Stratified Cystic Fibrosis Patients
- (2010) Michael J. Cox et al. PLoS One
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Characterizing aggressiveness and predicting future progression of CF lung disease
- (2009) Michael W. Konstan et al. Journal of Cystic Fibrosis
- The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
- (2008) J. R. Cole et al. NUCLEIC ACIDS RESEARCH
- A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients
- (2008) C. D. Sibley et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now