Soil enzymes as indicators of soil function: A step toward greater realism in microbial ecological modeling

Water availability modifies productivity response to biodiversity and nitrogen in long‐term grassland experiments

(2021) Clare E. Kazanski et al.   ECOLOGICAL APPLICATIONS

Uncertainty quantification of the soil moisture response functions for microbial dormancy and resuscitation

(2021) Gangsheng Wang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Modeling the processes of soil moisture in regulating microbial and carbon-nitrogen cycling

(2020) Gangsheng Wang et al.   JOURNAL OF HYDROLOGY

Gene-informed decomposition model predicts lower soil carbon loss due to persistent microbial adaptation to warming

(2020) Xue Guo et al.   Nature Communications

A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming

(2020) Daliang Ning et al.   Nature Communications

Linking microbial functional gene abundance and soil extracellular enzyme activity: Implications for soil carbon dynamics

(2020) Ji Chen et al.   GLOBAL CHANGE BIOLOGY

Stimulation of soil respiration by elevated CO2 is enhanced under nitrogen limitation in a decade-long grassland study

(2020) Qun Gao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A theory of effective microbial substrate affinity parameters in variably saturated soils and an example application to aerobic soil heterotrophic respiration

(2019) Jinyun Tang et al.   Journal of Geophysical Research-Biogeosciences

Scientists’ warning to humanity: microorganisms and climate change

(2019) Ricardo Cavicchioli et al.   NATURE REVIEWS MICROBIOLOGY

Functional Gene Array-Based Ultrasensitive and Quantitative Detection of Microbial Populations in Complex Communities

(2019) Zhou Shi et al.   mSystems

Soil enzyme activities and abundance of microbial functional genes involved in nitrogen transformations in an organic farming system

(2018) Yang Ouyang et al.   BIOLOGY AND FERTILITY OF SOILS

A meta-analysis of soil extracellular enzyme activities in response to global change

(2018) Wen Xiao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Multiple models and experiments underscore large uncertainty in soil carbon dynamics

(2018) Benjamin N. Sulman et al.   BIOGEOCHEMISTRY

Underestimates of Grassland Gross Primary Production in MODIS Standard Products

(2018) Xiaoyan Zhu et al.   Remote Sensing

Soil moisture drives microbial controls on carbon decomposition in two subtropical forests

(2018) Gangsheng Wang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Functional Enzyme-Based Approach for Linking Microbial Community Functions with Biogeochemical Process Kinetics

(2017) Minjing Li et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Soil carbon cycling proxies: Understanding their critical role in predicting climate change feedbacks

(2017) Vanessa L. Bailey et al.   GLOBAL CHANGE BIOLOGY

SoilWeb: A Multifaceted Interface to Soil Survey Information

(2017) Anthony O’Geen et al.   SOIL SCIENCE SOCIETY OF AMERICA JOURNAL

Regulation-Structured Dynamic Metabolic Model Provides a Potential Mechanism for Delayed Enzyme Response in Denitrification Process

(2017) Hyun-Seob Song et al.   Frontiers in Microbiology

A parsimonious modular approach to building a mechanistic belowground carbon and nitrogen model

(2017) Rose Z. Abramoff et al.   Journal of Geophysical Research-Biogeosciences

Stoichiometric plasticity of microbial communities is similar between litter and soil in a tropical rainforest

(2017) Nicolas Fanin et al.   Scientific Reports

Modeling coupled enzymatic and solute transport controls on decomposition in drying soils

(2016) S. Manzoni et al.   SOIL BIOLOGY & BIOCHEMISTRY

Modeling coupled pesticide degradation and organic matter turnover: From gene abundance to process rates

(2016) Holger Pagel et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil extracellular enzyme activities, soil carbon and nitrogen storage under nitrogen fertilization: A meta-analysis

(2016) Siyang Jian et al.   SOIL BIOLOGY & BIOCHEMISTRY

Managing uncertainty in soil carbon feedbacks to climate change

(2016) Mark A. Bradford et al.   Nature Climate Change

Tundra soil carbon is vulnerable to rapid microbial decomposition under climate warming

(2016) Kai Xue et al.   Nature Climate Change

Improved estimation of nitrogen uptake in grasslands using the nitrogen dilution curve

(2015) Julian Reyes et al.   Agronomy for Sustainable Development

The application of ecological stoichiometry to plant–microbial–soil organic matter transformations

(2015) Sophie Zechmeister-Boltenstern et al.   ECOLOGICAL MONOGRAPHS

Explicitly representing soil microbial processes in Earth system models

(2015) William R. Wieder et al.   GLOBAL BIOGEOCHEMICAL CYCLES

A Conformational Switch Triggers Nitrogenase Protection from Oxygen Damage by Shethna Protein II (FeSII)

(2015) Julia Schlesier et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Extracellular enzyme kinetics scale with resource availability

(2014) Robert L. Sinsabaugh et al.   BIOGEOCHEMISTRY

Divergence in plant and microbial allocation strategies explains continental patterns in microbial allocation and biogeochemical fluxes

(2014) Colin Averill   ECOLOGY LETTERS

Microbial dormancy improves development and experimental validation of ecosystem model

(2014) Gangsheng Wang et al.   ISME Journal

Relationships between protein-encoding gene abundance and corresponding process are commonly assumed yet rarely observed

(2014) Jennifer D Rocca et al.   ISME Journal

GeoChip 4: a functional gene-array-based high-throughput environmental technology for microbial community analysis

(2014) Qichao Tu et al.   Molecular Ecology Resources

Gene-centric approach to integrating environmental genomics and biogeochemical models

(2014) Daniel C. Reed et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Adjustment of microbial nitrogen use efficiency to carbon:nitrogen imbalances regulates soil nitrogen cycling

(2014) Maria Mooshammer et al.   Nature Communications

Stoichiometric imbalances between terrestrial decomposer communities and their resources: mechanisms and implications of microbial adaptations to their resources

(2014) Maria Mooshammer et al.   Frontiers in Microbiology

Enzyme allocation problems in kinetic metabolic networks: Optimal solutions are elementary flux modes

(2013) Stefan Müller et al.   JOURNAL OF THEORETICAL BIOLOGY

Patterns of new versus recycled primary production in the terrestrial biosphere

(2013) C. C. Cleveland et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial modulators of soil carbon storage: integrating genomic and metabolic knowledge for global prediction

(2013) Pankaj Trivedi et al.   TRENDS IN MICROBIOLOGY

Microbes and global carbon

(2013) Joshua Schimel   Nature Climate Change

Development of microbial-enzyme-mediated decomposition model parameters through steady-state and dynamic analyses

(2012) Gangsheng Wang et al.   ECOLOGICAL APPLICATIONS

Abundance of microbial genes associated with nitrogen cycling as indices of biogeochemical process rates across a vegetation gradient in Alaska

(2012) Dorthe Groth Petersen et al.   ENVIRONMENTAL MICROBIOLOGY

A global analysis of soil microbial biomass carbon, nitrogen and phosphorus in terrestrial ecosystems

(2012) Xiaofeng Xu et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Comparison of regionalization approaches based on regression and similarity for predictions in ungauged catchments under multiple hydro-climatic conditions

(2012) Zhenxin Bao et al.   JOURNAL OF HYDROLOGY

Nitrogen uptake by grassland communities: contribution of N2 fixation, facilitation, complementarity, and species dominance

(2012) Holger Bessler et al.   PLANT AND SOIL

Decade-long soil nitrogen constraint on the CO2 fertilization of plant biomass

(2012) Peter B. Reich et al.   Nature Climate Change

Microbial control over carbon cycling in soil

(2012) Joshua P. Schimel et al.   Frontiers in Microbiology

A framework for representing microbial decomposition in coupled climate models

(2011) Katherine E. O. Todd-Brown et al.   BIOGEOCHEMISTRY

A review on parameterization and uncertainty in modeling greenhouse gas emissions from soil

(2011) Gangsheng Wang et al.   GEODERMA

Elevated CO2 stimulates grassland soil respiration by increasing carbon inputs rather than by enhancing soil moisture

(2011) E. Carol Adair et al.   GLOBAL CHANGE BIOLOGY

The Dual Arrhenius and Michaelis-Menten kinetics model for decomposition of soil organic matter at hourly to seasonal time scales

(2011) Eric A. Davidson et al.   GLOBAL CHANGE BIOLOGY

Microbial mediation of carbon-cycle feedbacks to climate warming

(2011) Jizhong Zhou et al.   Nature Climate Change

Soil-carbon response to warming dependent on microbial physiology

(2010) Steven D. Allison et al.   Nature Geoscience

Interactive Effects of Time, CO2, N, and Diversity on Total Belowground Carbon Allocation and Ecosystem Carbon Storage in a Grassland Community

(2009) E. Carol Adair et al.   ECOSYSTEMS

Nitrogen additions and microbial biomass: a meta-analysis of ecosystem studies

(2008) Kathleen K. Treseder   ECOLOGY LETTERS

Microbial contributions to climate change through carbon cycle feedbacks

(2008) Richard D Bardgett et al.   ISME Journal

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE