Label-free quantitative proteomic analysis of the oral bacteria Fusobacterium nucleatum and Porphyromonas gingivalis to identify protein features relevant in biofilm formation

Proteomic analysis of Fusobacterium nucleatum growth in biofilm versus planktonic state

(2020) Arancha Llama‐Palacios et al.   Molecular Oral Microbiology

Distinct Metabolic Features of Pathogenic Escherichia coli and Shigella spp. Determined by Label‐Free Quantitative Proteomics

(2020) Veronika Kuchařová Pettersen et al.   PROTEOMICS

Towards defining the outer membrane proteome of Porphyromonas gingivalis

(2020) Paul D. Veith et al.   Molecular Oral Microbiology

Pathogenesis of Important Virulence Factors of Porphyromonas gingivalis via Toll-Like Receptors

(2019) Lu Jia et al.   Frontiers in Cellular and Infection Microbiology

Gene expression of Porphyromonas gingivalis ATCC 33277 when growing in an in vitro multispecies biofilm

(2019) Patricia Romero-Lastra et al.   PLoS One

Comparative gene expression analysis of Porphyromonas gingivalis ATCC 33277 in planktonic and biofilms states

(2017) P. Romero-Lastra et al.   PLoS One

Porphyromonas gingivalis suppresses invasion of Fusobacterium nucleatum into gingival epithelial cells

(2017) Young-Jung Jung et al.   Journal of Oral Microbiology

A meta-proteomics approach to study the interspecies interactions affecting microbial biofilm development in a model community

(2017) Jakob Herschend et al.   Scientific Reports

Target identification in Fusobacterium nucleatum by subtractive genomics approach and enrichment analysis of host-pathogen protein-protein interactions

(2016) Amit Kumar et al.   BMC MICROBIOLOGY

The Perseus computational platform for comprehensive analysis of (prote)omics data

(2016) Stefka Tyanova et al.   NATURE METHODS

The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition

(2016) Eric W. Deutsch et al.   NUCLEIC ACIDS RESEARCH

Quantitative Molecular Detection of 19 Major Pathogens in the Interdental Biofilm of Periodontally Healthy Young Adults

(2016) Florence Carrouel et al.   Frontiers in Microbiology

LuxS signaling in Porphyromonas gingivalis-host interactions

(2015) Nina Scheres et al.   ANAEROBE

Porphyromonas gingivalisvirulence factors involved in subversion of leukocytes and microbial dysbiosis

(2015) Camille Zenobia et al.   Virulence

Proteomic and Transcriptional Analysis of Interaction between Oral Microbiota Porphyromonas gingivalis and Streptococcus oralis

(2014) Kazuhiko Maeda et al.   JOURNAL OF PROTEOME RESEARCH

Periodontitis

(2014) Christoph Schaudinn et al.   JOURNAL OF THE AMERICAN DENTAL ASSOCIATION

Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ

(2014) Jürgen Cox et al.   MOLECULAR & CELLULAR PROTEOMICS

Proteomics ofFusobacterium nucleatumwithin a model developing oral microbial community

(2014) Erik L. Hendrickson et al.   MicrobiologyOpen

Fusobacterium nucleatum Promotes Colorectal Carcinogenesis by Modulating E-Cadherin/β-Catenin Signaling via its FadA Adhesin

(2013) Mara Roxana Rubinstein et al.   Cell Host & Microbe

A Two-Component System Regulates Hemin Acquisition in Porphyromonas gingivalis

(2013) Jodie C. Scott et al.   PLoS One

The FomA Porin from Fusobacterium nucleatum Is a Toll-Like Receptor 2 Agonist with Immune Adjuvant Activity

(2012) Deana N. Toussi et al.   Clinical and Vaccine Immunology

Differential Proteomic Analysis of a Polymicrobial Biofilm

(2012) Zamirah Zainal-Abidin et al.   JOURNAL OF PROTEOME RESEARCH

Protease inhibitors as possible pitfalls in proteomic analyses of complex biological samples

(2011) James Clifton et al.   Journal of Proteomics

Fusobacterium nucleatum adhesin FadA binds vascular endothelial cadherin and alters endothelial integrity

(2011) Yann Fardini et al.   MOLECULAR MICROBIOLOGY

Fusobacterium nucleatum GroEL induces risk factors of atherosclerosis in human microvascular endothelial cells and ApoE−/− mice

(2011) H-R. Lee et al.   Molecular Oral Microbiology

Bacterial interactions in dental biofilm

(2011) Ruijie Huang et al.   Virulence

Fusobacterium nucleatum Outer Membrane Proteins Fap2 and RadD Induce Cell Death in Human Lymphocytes

(2010) C. W. Kaplan et al.   INFECTION AND IMMUNITY

QuickGO: a web-based tool for Gene Ontology searching

(2009) D. Binns et al.   BIOINFORMATICS

Proteomics of Porphyromonas gingivalis within a model oral microbial community

(2009) Masae Kuboniwa et al.   BMC MICROBIOLOGY

Mutualistic Biofilm Communities Develop with Porphyromonas gingivalis and Initial, Early, and Late Colonizers of Enamel

(2009) S. Periasamy et al.   JOURNAL OF BACTERIOLOGY

Mouse model of experimental periodontitis induced byPorphyromonas gingivalis/Fusobacterium nucleatuminfection: bone loss and host response

(2009) David Polak et al.   JOURNAL OF CLINICAL PERIODONTOLOGY

Universal sample preparation method for proteome analysis

(2009) Jacek R Wiśniewski et al.   NATURE METHODS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Determination of the Genome Sequence of Porphyromonas gingivalis Strain ATCC 33277 and Genomic Comparison with Strain W83 Revealed Extensive Genome Rearrangements in P. gingivalis

(2008) M. Naito et al.   DNA RESEARCH

The Vitamin Riboflavin and Its Derivative Lumichrome Activate the LasR Bacterial Quorum-Sensing Receptor

(2008) Sathish Rajamani et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Shewanella secretes flavins that mediate extracellular electron transfer

(2008) E. Marsili et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Application of16O/18O reverse proteolytic labeling to determine the effect of biofilm culture on the cell envelope proteome ofPorphyromonas gingivalis W50

(2008) Ching-Seng Ang et al.   PROTEOMICS