Diversification, spread, and admixture of octoploid strawberry in the Western Hemisphere

Genes derived from ancient polyploidy have higher genetic diversity and are associated with domestication in Brassica rapa

(2021) Xinshuai Qi et al.   NEW PHYTOLOGIST

Unraveling the Complex Hybrid Ancestry and Domestication History of Cultivated Strawberry

(2021) Michael A Hardigan et al.   MOLECULAR BIOLOGY AND EVOLUTION

Corrigendum to: “Social network analysis of the genealogy of strawberry: retracing the wild roots of heirloom and modern cultivars”

(2021) Dominique D A Pincot et al.   G3-Genes Genomes Genetics

Genome Synteny Has Been Conserved Among the Octoploid Progenitors of Cultivated Strawberry Over Millions of Years of Evolution

(2020) Michael A. Hardigan et al.   Frontiers in Plant Science

Long distance dispersal of the beach strawberry, Fragaria chiloensis, from North America to Chile and Hawaii

(2020) James F Hancock et al.   ANNALS OF BOTANY

Origin and evolution of the octoploid strawberry genome

(2019) Patrick P. Edger et al.   NATURE GENETICS

Genome duplication effects on functional traits and fitness are genetic context and species dependent: studies of synthetic polyploid Fragaria

(2019) Na Wei et al.   AMERICAN JOURNAL OF BOTANY

Impact of whole-genome duplication events on diversification rates in angiosperms

(2018) Jacob B. Landis et al.   AMERICAN JOURNAL OF BOTANY

Plastid genomes reveal recurrent formation of allopolyploid Fragaria

(2018) Markus S. Dillenberger et al.   AMERICAN JOURNAL OF BOTANY

Inferring Continuous and Discrete Population Genetic Structure Across Space

(2018) Gideon S. Bradburd et al.   GENETICS

The Effect of Gene Flow on Coalescent-based Species-Tree Inference

(2018) Colby Long et al.   SYSTEMATIC BIOLOGY

Inferring Continuous and Discrete Population Genetic Structure Across Space

(2018) Gideon S. Bradburd et al.   GENETICS

Chromosome-scale scaffolding of the black raspberry (Rubus occidentalis L.) genome based on chromatin interaction data

(2018) Rubina Jibran et al.   Horticulture Research

Functional trait divergence and trait plasticity confer polyploid advantage in heterogeneous environments

(2018) Na Wei et al.   NEW PHYTOLOGIST

The evolutionary significance of polyploidy

(2017) Yves Van de Peer et al.   NATURE REVIEWS GENETICS

Progress, challenges and the future of crop genomes

(2015) Todd P Michael et al.   CURRENT OPINION IN PLANT BIOLOGY

The butterfly plant arms-race escalated by gene and genome duplications

(2015) Patrick P. Edger et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quartet Inference from SNP Data Under the Coalescent Model

(2014) Julia Chifman et al.   BIOINFORMATICS

fastSTRUCTURE: Variational Inference of Population Structure in Large SNP Data Sets

(2014) Anil Raj et al.   GENETICS

Speciation and Introgression between Mimulus nasutus and Mimulus guttatus

(2014) Yaniv Brandvain et al.   PLoS Genetics

Recent progress and challenges in population genetics of polyploid organisms: an overview of current state-of-the-art molecular and statistical tools

(2013) France Dufresne et al.   MOLECULAR ECOLOGY

A high-performance computing toolset for relatedness and principal component analysis of SNP data

(2012) X. Zheng et al.   BIOINFORMATICS

Ancient whole genome duplications, novelty and diversification: the WGD Radiation Lag-Time Model

(2012) M Eric Schranz et al.   CURRENT OPINION IN PLANT BIOLOGY

Ancient Admixture in Human History

(2012) N. Patterson et al.   GENETICS

Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data

(2012) Joseph K. Pickrell et al.   PLoS Genetics

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS