Patterns of Cryptic Diversity and Phylogeography in Four Freshwater Copepod Crustaceans in European Lakes

Unexpected mitochondrial lineage diversity within the genus Alonella Sars, 1862 (Crustacea: Cladocera) across the Northern Hemisphere

(2021) Anna N. Neretina et al.   PeerJ

Lasting through the ice age: The role of the proglacial refugia in the maintenance of genetic diversity, population growth, and high dispersal rate in a widespread freshwater crustacean

(2020) Lidia Sworobowicz et al.   FRESHWATER BIOLOGY

Phylogeographic parallelism: Concordant patterns in closely related species illuminate underlying mechanisms in the historically glaciated Tasmanian landscape

(2020) Kaely May Kreger et al.   JOURNAL OF BIOGEOGRAPHY

Phylogeography of Acartia tonsa Dana, 1849 (Calanoida: Copepoda) and phylogenetic reconstruction of the genus Acartia Dana, 1846

(2020) Nicole J. Figueroa et al.   Marine Biodiversity

Cryptic diversity and mtDNA phylogeography of the invasive demon shrimp, Dikerogammarus haemobaphes (Eichwald, 1841), in Europe

(2020) Anna Maria Jażdżewska et al.   NeoBiota

Cycles of trans‐Arctic dispersal and vicariance, and diversification of the amphi‐boreal marine fauna

(2020) Hanna Laakkonen et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

A molecular phylogeny of the freshwater‐fish genus Rasbora (Teleostei: Cyprinidae) in Sri Lanka reveals a remarkable diversification—And a cryptic species

(2020) Hiranya Sudasinghe et al.   JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH

Towards a phylogeny of Cyclops (Copepoda): (in)congruences among morphology, molecules and zoogeography

(2019) Maria Hołyńska et al.   ZOOLOGICA SCRIPTA

Changes in trophic state and aquatic communities in high Arctic ponds in response to increasing goose populations

(2019) Thomas C. Jensen et al.   FRESHWATER BIOLOGY

Revealing higher than expected diversity of Harpacticoida (Crustacea:Copepoda) in the North Sea using MALDI-TOF MS and molecular barcoding

(2019) S. Rossel et al.   Scientific Reports

Unexpected endemism in the Daphnia longispina complex (Crustacea: Cladocera) in Southern Siberia

(2019) Elena I. Zuykova et al.   PLoS One

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogeography of Daphnia magna Straus (Crustacea: Cladocera) in Northern Eurasia: Evidence for a deep longitudinal split between mitochondrial lineages

(2018) Eugeniya I. Bekker et al.   PLoS One

Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7

(2018) Andrew Rambaut et al.   SYSTEMATIC BIOLOGY

Genomic signatures of mitonuclear coevolution across populations of Tigriopus californicus

(2018) Felipe S. Barreto et al.   Nature Ecology & Evolution

Migratory birds along the Mediterranean/Black Sea Flyway as carriers of zoonotic pathogens

(2018) Hristo Najdenski et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Unraveling the intricate biodiversity of the benthic harpacticoid genus Nannopus (Copepoda, Harpacticoida, Nannopodidae) in Korean waters

(2018) Vinod Vakati et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Large geographic distance versus small DNA barcode divergence: Insights from a comparison of European to South Siberian Lepidoptera

(2018) Peter Huemer et al.   PLoS One

Genetic analysis on Pseudodiaptomus inopinus (Copepoda, Calanoida) species complex in Japan: revival of the species name of P. japonicus Kikuchi, 1928

(2018) Sakiko Orui Sakaguchi et al.   Plankton & Benthos Research

Multiple-stressor effects on stream invertebrates: DNA barcoding reveals contrasting responses of cryptic mayfly species

(2016) Jan N. Macher et al.   ECOLOGICAL INDICATORS

Algorithmic improvements to species delimitation and phylogeny estimation under the multispecies coalescent

(2016) Graham Jones   JOURNAL OF MATHEMATICAL BIOLOGY

Phylogeography and connectivity of thePseudocalanus(Copepoda: Calanoida) species complex in the eastern North Pacific and the Pacific Arctic Region

(2016) Jennifer Marie Questel et al.   JOURNAL OF PLANKTON RESEARCH

Cryptic diversity in the Western Balkan endemic copepod: Four species in one?

(2016) Ana Previšić et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

In the light of evolution X: Comparative phylogeography

(2016) John C. Avise et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative phylogeography of the ocean planet

(2016) Brian W. Bowen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative phylogeography clarifies the complexity and problems of continental distribution that drove A. R. Wallace to favor islands

(2016) Brett R. Riddle   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chelex 100 as a Medium for Simple Extraction of DNA for PCR-Based Typing from Forensic Material

(2016) P. Sean Walsh et al.   BIOTECHNIQUES

Mitochondrial DNA Analyses Indicate High Diversity, Expansive Population Growth and High Genetic Connectivity of Vent Copepods (Dirivultidae) across Different Oceans

(2016) Sabine Gollner et al.   PLoS One

Evolutionary mechanisms of habitat invasions, using the copepodEurytemora affinisas a model system

(2015) Carol Eunmi Lee   Evolutionary Applications

Revisiting the phylogeography ofAsellus aquaticusin Europe: insights into cryptic diversity and spatiotemporal diversification

(2015) Lidia Sworobowicz et al.   FRESHWATER BIOLOGY

Genetic and morphological heterogeneity withinEucyclops serrulatus(Fischer, 1851) (Crustacea: Copepoda: Cyclopidae)

(2015) Natalia Sukhikh et al.   JOURNAL OF NATURAL HISTORY

A new subterraneanMaraenobiotus(Crustacea: Copepoda) from Slovenia challenges the concept of polymorphic and widely distributed harpacticoids

(2015) Anton Brancelj et al.   JOURNAL OF NATURAL HISTORY

popart: full-feature software for haplotype network construction

(2015) Jessica W. Leigh et al.   Methods in Ecology and Evolution

Discovering hidden biodiversity: the use of complementary monitoring of fish diet based on DNA barcoding in freshwater ecosystems

(2015) Hyunbin Jo et al.   Ecology and Evolution

Evidence of cryptic and pseudocryptic speciation in the Paracalanus parvus species complex (Crustacea, Copepoda, Calanoida)

(2014) Astrid Cornils et al.   Frontiers in Zoology

How do freshwater organisms cross the “dry ocean”? A review on passive dispersal and colonization processes with a special focus on temporary ponds

(2014) Giulia Incagnone et al.   HYDROBIOLOGIA

Barcoding Beetles: A Regional Survey of 1872 Species Reveals High Identification Success and Unusually Deep Interspecific Divergences

(2014) Mikko Pentinsaari et al.   PLoS One

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

Cytonuclear Genomic Interactions and Hybrid Breakdown

(2013) Ronald S. Burton et al.   Annual Review of Ecology Evolution and Systematics

Molecular evidence for further overlooked species within the Gammarus fossarum complex (Crustacea: Amphipoda)

(2013) Martina Weiss et al.   HYDROBIOLOGIA

DNA barcoding of freshwater Rotifera in Mexico: Evidence of cryptic speciation in common rotifers

(2013) A. E. García-Morales et al.   Molecular Ecology Resources

Hidden Biodiversity in an Ecologically Important Freshwater Amphipod: Differences in Genetic Structure between Two Cryptic Species

(2013) Anja Marie Westram et al.   PLoS One

Delimiting Species Using Single-Locus Data and the Generalized Mixed Yule Coalescent Approach: A Revised Method and Evaluation on Simulated Data Sets

(2013) Tomochika Fujisawa et al.   SYSTEMATIC BIOLOGY

Comparative phylogeography reveals deep lineages and regional evolutionary hotspots in the Mojave and Sonoran Deserts

(2012) Dustin A. Wood et al.   DIVERSITY AND DISTRIBUTIONS

Explosive radiation of the genus Schizopera on a small subterranean island in Western Australia (Copepoda:Harpacticoida): unravelling the cases of cryptic speciation, size differentiation and multiple invasions

(2012) Tomislav Karanovic et al.   INVERTEBRATE SYSTEMATICS

Cryptic diversity of the ‘cosmopolitan’ harpacticoid copepodNannopus palustris: genetic and morphological evidence

(2012) Lesya Garlitska et al.   MOLECULAR ECOLOGY

Parallel phylogeographic structure in ecologically similar sympatric sister taxa

(2012) MICHAEL N DAWSON   MOLECULAR ECOLOGY

Overlooked cryptic endemism in copepods: Systematics and natural history of the calanoid subgenus Occidodiaptomus Borutzky 1991 (Copepoda, Calanoida, Diaptomidae)

(2012) Federico Marrone et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Mitochondrial DNA Regionalism and Historical Demography in the Extant Populations of Chirocephalus kerkyrensis (Branchiopoda: Anostraca)

(2012) Valerio Ketmaier et al.   PLoS One

Congruent patterns of lineage diversity in two species complexes of planktonic crustaceans,Daphnia longispina(Cladocera) andEucyclops serrulatus(Copepoda), in East European mountain lakes

(2012) EVA HAMROVÁ et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Observing copepods through a genomic lens

(2011) James E Bron et al.   Frontiers in Zoology

Species boundaries in Zausodes-complex species (Copepoda�:�Harpacticoida�:�Harpacticidae) from the north-eastern Gulf of Mexico

(2011) Erin E. Easton et al.   INVERTEBRATE SYSTEMATICS

Genetic heterogeneity among Eurytemora affinis populations in Western Europe

(2011) Gesche Winkler et al.   MARINE BIOLOGY

DNA barcoding reveals hidden diversity in the Neotropical freshwater fishPiabina argentea(Characiformes: Characidae) from the Upper Paraná Basin of Brazil

(2011) Luiz H. G. Pereira et al.   Mitochondrial DNA

ABGD, Automatic Barcode Gap Discovery for primary species delimitation

(2011) N. PUILLANDRE et al.   MOLECULAR ECOLOGY

Reconciling Deep Calibration and Demographic History: Bayesian Inference of Post Glacial Colonization Patterns in Carcinus aestuarii (Nardo, 1847) and C. maenas (Linnaeus, 1758)

(2011) Ilaria A. M. Marino et al.   PLoS One

Interpopulation patterns of divergence and selection across the transcriptome of the copepod Tigriopus californicus

(2010) FELIPE S. BARRETO et al.   MOLECULAR ECOLOGY

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Investigations of fine-scale phylogeography in Tigriopus californicus reveal historical patterns of population divergence

(2009) Christopher S Willett et al.   BMC EVOLUTIONARY BIOLOGY

A conflict of morphological and genetic patterns in the Australian anostracan Branchinella longirostris

(2009) Magdalena Zofkova et al.   HYDROBIOLOGIA

Inferring the past to predict the future: climate modelling predictions and phylogeography for the freshwater gastropodRadix balthica(Pulmonata, Basommatophora)

(2009) M. CORDELLIER et al.   MOLECULAR ECOLOGY

Deep genetic divergences among morphologically similar and parapatric Skistodiaptomus (Copepoda: Calanoida: Diaptomidae) challenge the hypothesis of Pleistocene speciation

(2008) RYAN A. THUM et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

Evidence of population genetic effects of long-term exposure to contaminated sediments—A multi-endpoint study with copepods

(2007) Johanna Gardeström et al.   AQUATIC TOXICOLOGY

Molecular phylogeography of the nose-horned viper (Vipera ammodytes, Linnaeus (1758)): Evidence for high genetic diversity and multiple refugia in the Balkan peninsula

(2007) S. Ursenbacher et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION