Unexpected endemism in the Daphnia longispina complex (Crustacea: Cladocera) in Southern Siberia

Identification and Phylogeny of Cryptic Species of the Daphnia Longispina Complex (Anomopoda, Daphniidae) Using ITS2 Secondary Structure

(2019) E. I. Zuykova   RUSSIAN JOURNAL OF GENETICS

Contrasting endemism in pond-dwelling cyclic parthenogens: the Daphnia curvirostris species group (Crustacea: Cladocera)

(2019) Alexey A. Kotov et al.   Scientific Reports

Cryptic species as a window into the paradigm shift of the species concept

(2018) Cene Fišer et al.   MOLECULAR ECOLOGY

Mitogenome phylogeographic analysis of a planktonic crustacean

(2018) Peter D. Fields et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogeography of Daphnia magna Straus (Crustacea: Cladocera) in Northern Eurasia: Evidence for a deep longitudinal split between mitochondrial lineages

(2018) Eugeniya I. Bekker et al.   PLoS One

Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7

(2018) Andrew Rambaut et al.   SYSTEMATIC BIOLOGY

Invasion of a Holarctic planktonic cladoceran Daphnia galeata Sars (Crustacea: Cladocera) in the Lower Lakes of South Australia

(2018) DMITRY P. KARABANOV et al.   ZOOTAXA

Daphnia diversity on the Tibetan Plateau measured by DNA taxonomy

(2018) Lei Xu et al.   Ecology and Evolution

Daphnia galeata and D. dentifera are geographically and ecologically separated whereas their hybrids occur in intermediate habitats: survey of 44 Chinese lakes

(2018) Xiaolin Ma et al.   MOLECULAR ECOLOGY

Contrasting phylogeographic patterns and demographic history in closely related species of Daphnia longispina group (Crustacea: Cladocera) with focus on North-Eastern Eurasia

(2018) Elena I. Zuykova et al.   PLoS One

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

The fossil record of the Cladocera (Crustacea: Branchiopoda): Evidence and hypotheses

(2016) Kay Van Damme et al.   EARTH-SCIENCE REVIEWS

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogeography of the Chydorus sphaericus Group (Cladocera: Chydoridae) in the Northern Palearctic

(2016) Alexey A. Kotov et al.   PLoS One

Genetic polymorphism, haplotype distribution, and phylogeny of Daphnia (Cladocera: Anomopoda) species from the water bodies of russia as inferred from the 16S mtDNA gene sequencing

(2016) E. I. Zuykova et al.   RUSSIAN JOURNAL OF GENETICS

DNA Barcoding Reveals High Cryptic Diversity in the North Eurasian Moina Species (Crustacea: Cladocera)

(2016) Eugeniya I. Bekker et al.   PLoS One

A critical review of the current taxonomy of the genus Daphnia O. F. Müller, 1785 (Anomopoda, Cladocera)

(2015) ALEXEY A. KOTOV   ZOOTAXA

Diversity of the Daphnia longispina species complex in Chinese lakes: a DNA taxonomy approach

(2014) Xiaolin Ma et al.   JOURNAL OF PLANKTON RESEARCH

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Local and regional founder effects in lake zooplankton persist after thousands of years despite high dispersal potential

(2014) M. Ventura et al.   MOLECULAR ECOLOGY

Ecological Structure of Recent and Last Glacial Mammalian Faunas in Northern Eurasia: The Case of Altai-Sayan Refugium

(2014) Věra Pavelková Řičánková et al.   PLoS One

Relict species: a relict concept?

(2014) Philippe Grandcolas et al.   TRENDS IN ECOLOGY & EVOLUTION

Ultrafast Approximation for Phylogenetic Bootstrap

(2013) B. Q. Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Extra-Mediterranean refugia: The rule and not the exception?

(2012) Thomas Schmitt et al.   Frontiers in Zoology

Identification of the Daphnia species (Crustacea: Cladocera) in the lakes of the Ob and Yenisei River basins: morphological and molecular phylogenetic approaches

(2012) Elena I. Zuykova et al.   HYDROBIOLOGIA

At the edge and on the top: molecular identification and ecology of Daphnia dentifera and D. longispina in high-altitude Asian lakes

(2012) Markus Möst et al.   HYDROBIOLOGIA

A description of pelagic zooplankton in the large lakes of the Todzha Depression (Bolshoi Yenisey River basin, Tuva)

(2012) E. I. Zuikova et al.   Inland Water Biology

Mitochondrial sequence variation suggests extensive cryptic diversity within the Western PalearcticDaphnia longispinacomplex

(2012) Adam Petrusek et al.   LIMNOLOGY AND OCEANOGRAPHY

The role of selection in driving landscape genomic structure of the waterfleaDaphnia magna

(2012) Luisa Orsini et al.   MOLECULAR ECOLOGY

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Modes and mechanisms of a Daphnia invasion

(2012) P. Spaak et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Congruent patterns of lineage diversity in two species complexes of planktonic crustaceans,Daphnia longispina(Cladocera) andEucyclops serrulatus(Copepoda), in East European mountain lakes

(2012) EVA HAMROVÁ et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

The long-term consequences of hybridization between the two Daphnia species, D. galeata and D. dentifera, in mature habitats

(2011) Seiji Ishida et al.   BMC EVOLUTIONARY BIOLOGY

The Afromontane Cladocera (Crustacea: Branchiopoda) of the Rwenzori (Uganda–D. R. Congo): taxonomy, ecology and biogeography

(2011) Kay Van Damme et al.   HYDROBIOLOGIA

Species Diversity and Phylogeographical Affinities of the Branchiopoda (Crustacea) of Churchill, Manitoba, Canada

(2011) Nicholas W. Jeffery et al.   PLoS One

MetaPIGA v2.0: maximum likelihood large phylogeny estimation using the metapopulation genetic algorithm and other stochastic heuristics

(2010) Raphaël Helaers et al.   BMC BIOINFORMATICS

Rapid ecological isolation and intermediate genetic divergence in lacustrine cyclic parthenogens

(2010) Katie S Costanzo et al.   BMC EVOLUTIONARY BIOLOGY

Identifying hybridizing taxa within the Daphnia longispina species complex: a comparison of genetic methods and phenotypic approaches

(2010) Štepánka Dlouhá et al.   HYDROBIOLOGIA

Biogeography and evolution of the Holarctic zooplankton genus Leptodora (Crustacea: Branchiopoda: Haplopoda)

(2010) Lei Xu et al.   JOURNAL OF BIOGEOGRAPHY

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Coexisting Cyclic Parthenogens Comprise a Holocene Species Flock in Eubosmina

(2010) Markéta Faustová et al.   PLoS One

The Late Pleistocene–Holocene climate history in the western Todzha basin (Eastern Tuva)

(2010) S.G. Arzhannikov et al.   Russian Geology and Geophysics

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Contribution of cyclic parthenogenesis and colonization history to population structure inDaphnia

(2009) ANNE THIELSCH et al.   MOLECULAR ECOLOGY

Revision of the genusBosminaBaird, 1845 (Cladocera: Bosminidae), based on evidence from male morphological characters and molecular phylogenies

(2009) ALEXEY A. KOTOV et al.   ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Cryptic species within the Chydorus sphaericus species complex (Crustacea: Cladocera) revealed by molecular markers and sexual stage morphology

(2008) Maria Belyaeva et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The scale of divergence: A phylogenetic appraisal of intercontinental allopatric speciation in a passively dispersed freshwater zooplankton genus

(2008) Sarah J. Adamowicz et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Spatial, environmental and anthropogenic effects on the taxon composition of hybridizing Daphnia

(2008) B. Keller et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A taxonomic reappraisal of the EuropeanDaphnia longispinacomplex (Crustacea, Cladocera, Anomopoda)

(2008) Adam Petrusek et al.   ZOOLOGICA SCRIPTA