Genomic Prediction across Structured Hybrid Populations and Environments in Maize

Bulk pollen pollination in maize for efficient construction of introgression populations with high genome coverage

(2019) Pingxi Wang et al.   PLANT BREEDING

Hybrid Breeding of Rice via Genomic Selection

(2019) Yanru Cui et al.   PLANT BIOTECHNOLOGY JOURNAL

Genetic relatedness and the ratio of subpopulation‐common alleles are related in genomic prediction across structured subpopulations in maize

(2019) Dongdong Li et al.   PLANT BREEDING

Correction: Enhancing genomic selection by fitting large-effect SNPs as fixed effects and a genotype-by-environment effect using a maize BC1F3:4population

(2019) Dongdong Li et al.   PLoS One

Improving accuracies of genomic predictions for drought tolerance in maize by joint modeling of additive and dominance effects in multi-environment trials

(2018) Kaio Olímpio Das Graças Dias et al.   HEREDITY

Heterosis-related genes under different planting densities in maize

(2018) Juan Ma et al.   JOURNAL OF EXPERIMENTAL BOTANY

Dissecting the Genetic Basis Underlying Combining Ability of Plant Height Related Traits in Maize

(2018) Zhiqiang Zhou et al.   Frontiers in Plant Science

Development of a maize 55 K SNP array with improved genome coverage for molecular breeding

(2017) Cheng Xu et al.   MOLECULAR BREEDING

Initiating maize pre-breeding programs using genomic selection to harness polygenic variation from landrace populations

(2016) Gregor Gorjanc et al.   BMC GENOMICS

Extending the Marker × Environment Interaction Model for Genomic-Enabled Prediction and Genome-Wide Association Analysis in Durum Wheat

(2016) José Crossa et al.   CROP SCIENCE

Molecular mapping of quantitative trait loci for grain moisture at harvest in maize

(2016) Wei Song et al.   PLANT BREEDING

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Genomic analysis of hybrid rice varieties reveals numerous superior alleles that contribute to heterosis

(2015) Xuehui Huang et al.   Nature Communications

Increased Prediction Accuracy in Wheat Breeding Trials Using a Marker × Environment Interaction Genomic Selection Model

(2015) Marco Lopez-Cruz et al.   G3-Genes Genomes Genetics

Genome-Wide Regression and Prediction with the BGLR Statistical Package

(2014) P. Perez et al.   GENETICS

SNP-Seek database of SNPs derived from 3000 rice genomes

(2014) Nickolai Alexandrov et al.   NUCLEIC ACIDS RESEARCH

Predicting hybrid performance in rice using genomic best linear unbiased prediction

(2014) S. Xu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Relatedness and Genotype × Environment Interaction Affect Prediction Accuracies in Genomic Selection: A Study in Cassava

(2013) Delphine Ly et al.   CROP SCIENCE

Mapping Quantitative Trait Loci by Controlling Polygenic Background Effects

(2013) S. Xu   GENETICS

Genomic Predictability of Interconnected Biparental Maize Populations

(2013) C. Riedelsheimer et al.   GENETICS

Genomic prediction in CIMMYT maize and wheat breeding programs

(2013) J Crossa et al.   HEREDITY

Accuracy of Genomewide Selection for Different Traits with Constant Population Size, Heritability, and Number of Markers

(2013) Emily Combs et al.   Plant Genome

synbreed: a framework for the analysis of genomic prediction data using R

(2012) Valentin Wimmer et al.   BIOINFORMATICS

Genomewide Selection versus Marker-assisted Recurrent Selection to Improve Grain Yield and Stover-quality Traits for Cellulosic Ethanol in Maize

(2012) Jon M. Massman et al.   CROP SCIENCE

Genomewide predictions from maize single-cross data

(2012) Jon M. Massman et al.   THEORETICAL AND APPLIED GENETICS

Global food demand and the sustainable intensification of agriculture

(2011) D. Tilman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic selection for durable stem rust resistance in wheat

(2010) Jessica E. Rutkoski et al.   EUPHYTICA

Mapping QTL Associated with Photoperiod Sensitivity and Assessing the Importance of QTL×Environment Interaction for Flowering Time in Maize

(2010) Cuiling Wang et al.   PLoS One

A Unified Approach to Genotype Imputation and Haplotype-Phase Inference for Large Data Sets of Trios and Unrelated Individuals

(2009) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS