High‐throughput dilution‐based growth method enables time‐resolved exo‐metabolomics of Pseudomonas putida and Pseudomonas aeruginosa

Reconfiguration of metabolic fluxes in Pseudomonas putida as a response to sub-lethal oxidative stress

(2021) Pablo I. Nikel et al.   ISME Journal

Pseudomonas aeruginosa reverse diauxie is a multidimensional, optimized, resource utilization strategy

(2021) S. Lee McGill et al.   Scientific Reports

Low CyaA expression and anti‐cooperative binding of cAMP to CRP frames the scope of the cognate regulon of Pseudomonas putida

(2021) Alejandro Arce‐Rodríguez et al.   ENVIRONMENTAL MICROBIOLOGY

Contextual Flexibility in Pseudomonas aeruginosa Central Carbon Metabolism during Growth in Single Carbon Sources

(2020) Stephen K. Dolan et al.   mBio

Industrial biotechnology of Pseudomonas putida: advances and prospects

(2020) Anna Weimer et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Membrane phospholipid composition of Pseudomonas aeruginosa grown in a cystic fibrosis mucus-mimicking medium

(2020) Estelle Deschamps et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

Pseudomonas aeruginosa adaptation and evolution in patients with cystic fibrosis

(2020) Elio Rossi et al.   NATURE REVIEWS MICROBIOLOGY

Evolutionary highways to persistent bacterial infection

(2019) Jennifer A. Bartell et al.   Nature Communications

Pseudomonas putida KT2440 metabolism undergoes sequential modifications during exponential growth in a complete medium as compounds are gradually consumed

(2019) Lázaro Molina et al.   ENVIRONMENTAL MICROBIOLOGY

Influence of the Crc global regulator on substrate uptake rates and the distribution of metabolic fluxes in Pseudomonas putida KT2440 growing in a complete medium

(2019) Lázaro Molina et al.   ENVIRONMENTAL MICROBIOLOGY

Reverse diauxie phenotype in Pseudomonas aeruginosa biofilm revealed by exometabolomics and label-free proteomics

(2019) Yeni P. Yung et al.   npj Biofilms and Microbiomes

Adapting to the Airways: Metabolic Requirements of Pseudomonas aeruginosa during the Infection of Cystic Fibrosis Patients

(2019) La Rosa et al.   Metabolites

The environmental occurrence of Pseudomonas aeruginosa

(2019) Stephanie Crone et al.   APMIS

Convergent Metabolic Specialization through Distinct Evolutionary Paths in Pseudomonas aeruginosa

(2018) Ruggero La Rosa et al.   mBio

Influence of the Crc regulator on the hierarchical use of carbon sources from a complete medium in P seudomonas

(2016) Ruggero La Rosa et al.   ENVIRONMENTAL MICROBIOLOGY

Complex Interplay between FleQ, Cyclic Diguanylate and Multiple σ Factors Coordinately Regulates Flagellar Motility and Biofilm Development in Pseudomonas putida

(2016) Alicia Jiménez-Fernández et al.   PLoS One

Using Genome-scale Models to Predict Biological Capabilities

(2015) Edward J. O’Brien et al.   CELL

Pseudomonas putidaKT2440 Strain Metabolizes Glucose through a Cycle Formed by Enzymes of the Entner-Doudoroff, Embden-Meyerhof-Parnas, and Pentose Phosphate Pathways

(2015) Pablo I. Nikel et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Essential genome ofPseudomonas aeruginosain cystic fibrosis sputum

(2015) Keith H. Turner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Parallel use of shake flask and microtiter plate online measuring devices (RAMOS and BioLector) reduces the number of experiments in laboratory-scale stirred tank bioreactors

(2015) S. J. Wewetzer et al.   Journal of Biological Engineering

High cell density cultivation ofPseudomonas putidaKT2440 using glucose without the need for oxygen enriched air supply

(2014) Reeta Davis et al.   BIOTECHNOLOGY AND BIOENGINEERING

Towards an Informative Mutant Phenotype for Every Bacterial Gene

(2014) A. Deutschbauer et al.   JOURNAL OF BACTERIOLOGY

Biotechnological domestication of pseudomonads using synthetic biology

(2014) Pablo I. Nikel et al.   NATURE REVIEWS MICROBIOLOGY

Coordination of microbial metabolism

(2014) Victor Chubukov et al.   NATURE REVIEWS MICROBIOLOGY

The c-di-GMP phosphodiesterase BifA regulates biofilm development inPseudomonas putida

(2014) Alicia Jiménez-Fernández et al.   Environmental Microbiology Reports

Direct Assessment of Metabolite Utilization by Pseudomonas aeruginosa during Growth on Artificial Sputum Medium

(2013) Volker Behrends et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

New methods for the isolation and characterization of biofilm-persistent mutants inPseudomonas putida

(2013) Aroa López-Sánchez et al.   Environmental Microbiology Reports

Extensive exometabolome analysis reveals extended overflow metabolism in various microorganisms

(2012) Nicole Paczia et al.   Microbial Cell Factories

High-resolution time series of Pseudomonas aeruginosa gene expression and rhamnolipid secretion through growth curve synchronization

(2011) Dave van Ditmarsch et al.   BMC MICROBIOLOGY

Time-Resolved Metabolic Footprinting for Nonlinear Modeling of Bacterial Substrate Utilization

(2009) V. Behrends et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metabolic footprinting in microbiology: methods and applications in functional genomics and biotechnology

(2008) Valeria Mapelli et al.   TRENDS IN BIOTECHNOLOGY