Maternal fecal microbiome predicts gestational age, birth weight and neonatal growth in rural Zimbabwe.

Bacterial glycogen provides short-term benefits in changing environments

(2020) Karthik Sekar et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Synthesis of ppGpp impacts type IX secretion and biofilm matrix formation in Porphyromonas gingivalis

(2020) Hey-Min Kim et al.   npj Biofilms and Microbiomes

Link between gut microbiota and health outcomes in inulin -treated obese patients: Lessons from the Food4Gut multicenter randomized placebo-controlled trial

(2020) Sophie Hiel et al.   CLINICAL NUTRITION

Co-occurrence of Campylobacter Species in Children From Eastern Ethiopia, and Their Association With Environmental Enteric Dysfunction, Diarrhea, and Host Microbiome

(2020) Yitagele Terefe et al.   Frontiers in Public Health

Visualizing the effects of predictor variables in black box supervised learning models

(2020) Daniel W. Apley et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

Duodenal Microbiota in Stunted Undernourished Children with Enteropathy

(2020) Robert Y. Chen et al.   NEW ENGLAND JOURNAL OF MEDICINE

Systematic analysis of gut microbiota in pregnant women and its correlations with individual heterogeneity

(2020) Hongling Yang et al.   npj Biofilms and Microbiomes

Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle

(2019) Edoardo Pasolli et al.   CELL

The Short-Chain Fatty Acid Propionate Protects from Hypertensive Cardiovascular Damage

(2019) Hendrik Bartolomaeus et al.   CIRCULATION

The human gut Firmicute Roseburia intestinalis is a primary degrader of dietary β-mannans

(2019) Sabina Leanti La Rosa et al.   Nature Communications

Bacteroides-Derived Sphingolipids Are Critical for Maintaining Intestinal Homeostasis and Symbiosis

(2019) Eric M. Brown et al.   Cell Host & Microbe

Novel Role of T Cells and IL-6 (Interleukin-6) in Angiotensin II–Induced Microvascular Dysfunction

(2019) Elena Y. Senchenkova et al.   HYPERTENSION

Impact of Water Quality, Sanitation, Handwashing, and Nutritional Interventions on Enteric Infections in Rural Zimbabwe: The Sanitation Hygiene Infant Nutrition Efficacy (SHINE) Trial

(2019) Elizabeth T Rogawski McQuade et al.   JOURNAL OF INFECTIOUS DISEASES

National, regional, and worldwide estimates of low birthweight in 2015, with trends from 2000: a systematic analysis

(2019) Hannah Blencowe et al.   Lancet Global Health

Daily Sampling Reveals Personalized Diet-Microbiome Associations in Humans

(2019) Abigail J. Johnson et al.   Cell Host & Microbe

Causal Interpretations of Black-Box Models

(2019) Qingyuan Zhao et al.   JOURNAL OF BUSINESS & ECONOMIC STATISTICS

Early-Onset Preeclampsia Is Associated With Gut Microbial Alterations in Antepartum and Postpartum Women

(2019) Li-Juan Lv et al.   Frontiers in Cellular and Infection Microbiology

Interspecies Competition Impacts Targeted Manipulation of Human Gut Bacteria by Fiber-Derived Glycans

(2019) Michael L. Patnode et al.   CELL

Isolates from Colonic Spirochetosis in Humans Show High Genomic Divergence and Potential Pathogenic Features but Are Not Detected Using Standard Primers for the Human Microbiota

(2019) Kaisa Thorell et al.   JOURNAL OF BACTERIOLOGY

Prevotella copri is associated with carboplatin-induced gut toxicity

(2019) Chaoheng Yu et al.   Cell Death & Disease

Comparative Genomics of Rumen Butyrivibrio spp. Uncovers a Continuum of Polysaccharide-Degrading Capabilities

(2019) Nikola Palevich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations

(2019) Adrian Tett et al.   Cell Host & Microbe

Microbial Metabolic Capacity for Intestinal Folate Production and Modulation of Host Folate Receptors

(2019) Melinda A. Engevik et al.   Frontiers in Microbiology

OUP accepted manuscript

(2018)   AMERICAN JOURNAL OF CLINICAL NUTRITION

Strain-Level Analysis of Mother-to-Child Bacterial Transmission during the First Few Months of Life

(2018) Moran Yassour et al.   Cell Host & Microbe

Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome

(2018) Pamela Ferretti et al.   Cell Host & Microbe

Intestinal Barrier Dysfunction and Microbial Translocation in Human Immunodeficiency Virus–Infected Pregnant Women Are Associated With Preterm Birth

(2018) Rupak Shivakoti et al.   CLINICAL INFECTIOUS DISEASES

Distinct composition of gut microbiota during pregnancy in overweight and normal-weight women

(2018) Maria Carmen Collado et al.   AMERICAN JOURNAL OF CLINICAL NUTRITION

Metagenomic insights into resistant starch degradation by human gut microbiota

(2018) Marius Vital et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome

(2018) Daniela S. Aliaga Goltsman et al.   GENOME RESEARCH

Opposing effects of S-equol supplementation on metabolic and behavioral parameters in mice fed a high fat diet

(2018) Erin N. Bax et al.   NUTRITION RESEARCH

Global, regional, and national estimates of levels of preterm birth in 2014: a systematic review and modelling analysis

(2018) Saifon Chawanpaiboon et al.   Lancet Global Health

Independent and combined effects of improved water, sanitation, and hygiene, and improved complementary feeding, on child stunting and anaemia in rural Zimbabwe: a cluster-randomised trial

(2018) Jean H Humphrey et al.   Lancet Global Health

An exploration of Prevotella-rich microbiomes in HIV and men who have sex with men

(2018) Abigail J. S. Armstrong et al.   Microbiome

Impacts of Diet and Exercise on Maternal Gut Microbiota Are Transferred to Offspring

(2018) Shyam Prakaash Bhagavata Srinivasan et al.   Frontiers in Endocrinology

Metabolic adaptation in the human gut microbiota during pregnancy and the first year of life

(2018) María José Gosalbes et al.   EBioMedicine

Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome

(2017) Tanja V. Maier et al.   mBio

Epigenetic Matters: The Link between Early Nutrition, Microbiome, and Long-term Health Development

(2017) Flavia Indrio et al.   Frontiers in Pediatrics

High-Fiber Diet and Acetate Supplementation Change the Gut Microbiota and Prevent the Development of Hypertension and Heart Failure in Hypertensive MiceClinical Perspective

(2016) Francine Z. Marques et al.   CIRCULATION

Distal, not proximal, colonic acetate infusions promote fat oxidation and improve metabolic markers in overweight/obese men

(2016) C. M. van der Beek et al.   CLINICAL SCIENCE

Connections Between the Gut Microbiome and Metabolic Hormones in Early Pregnancy in Overweight and Obese Women

(2016) Luisa F. Gomez-Arango et al.   DIABETES

Increased Systolic and Diastolic Blood Pressure Is Associated With Altered Gut Microbiota Composition and Butyrate Production in Early PregnancyNovelty and Significance

(2016) Luisa F. Gomez-Arango et al.   HYPERTENSION

Use of quantitative molecular diagnostic methods to identify causes of diarrhoea in children: a reanalysis of the GEMS case-control study

(2016) Jie Liu et al.   LANCET

Microbial short chain fatty acid metabolites lower blood pressure via endothelial G protein-coupled receptor 41

(2016) Niranjana Natarajan et al.   PHYSIOLOGICAL GENOMICS

Gut bacteria that prevent growth impairments transmitted by microbiota from malnourished children

(2016) L. V. Blanton et al.   SCIENCE

Maternal microbiome – A pathway to preterm birth

(2016) Angela E. Vinturache et al.   Seminars in Fetal & Neonatal Medicine

Gut Microbiome of Coexisting BaAka Pygmies and Bantu Reflects Gradients of Traditional Subsistence Patterns

(2016) Andres Gomez et al.   Cell Reports

Disruption ofde novopurine biosynthesis inPseudomonas fluorescensPf0-1 leads to reduced biofilm formation and a reduction in cell size of surface-attached but not planktonic cells

(2016) Shiro Yoshioka et al.   PeerJ

Lifestyle and geographic insights into the distinct gut microbiota in elderly women from two different geographic locations

(2016) Ji-Hee Shin et al.   Journal of Physiological Anthropology

Personalized Nutrition by Prediction of Glycemic Responses

(2015) David Zeevi et al.   CELL

Assessing the Intestinal Microbiota in the SHINE Trial

(2015) Ethan K. Gough et al.   CLINICAL INFECTIOUS DISEASES

The Sanitation Hygiene Infant Nutrition Efficacy (SHINE) Trial: Rationale, Design, and Methods

(2015)   CLINICAL INFECTIOUS DISEASES

Inflammatory Markers Related to Microbial Translocation Among HIV-Infected Pregnant Women: A Risk Factor of Preterm Delivery

(2015) Marta López et al.   JOURNAL OF INFECTIOUS DISEASES

MetaPhlAn2 for enhanced metagenomic taxonomic profiling

(2015) Duy Tin Truong et al.   NATURE METHODS

Temporal and spatial variation of the human microbiota during pregnancy

(2015) Daniel B. DiGiulio et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gut Microbial Succession Follows Acute Secretory Diarrhea in Humans

(2015) Lawrence A. David et al.   mBio

Subsistence strategies in traditional societies distinguish gut microbiomes

(2015) Alexandra J. Obregon-Tito et al.   Nature Communications

Risk of Adverse Pregnancy Outcomes among Women Practicing Poor Sanitation in Rural India: A Population-Based Prospective Cohort Study

(2015) Bijaya K. Padhi et al.   PLOS MEDICINE

Discussion: Effects of Folate and Vitamin B12 Deficiencies During Pregnancy on Fetal, Infant, and Child Development

(2015) Salvador Villalpando   FOOD AND NUTRITION BULLETIN

Effects of targeted delivery of propionate to the human colon on appetite regulation, body weight maintenance and adiposity in overweight adults

(2014) Edward S Chambers et al.   GUT

Maternal anxiety during pregnancy and adverse birth outcomes: A systematic review and meta-analysis of prospective cohort studies

(2014) Xiu-Xiu Ding et al.   JOURNAL OF AFFECTIVE DISORDERS

Persistent gut microbiota immaturity in malnourished Bangladeshi children

(2014) Sathish Subramanian et al.   NATURE

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

(2014) H Bjørn Nielsen et al.   NATURE BIOTECHNOLOGY

Intestinal Microbiota is Different in Women with Preterm Birth: Results from Terminal Restriction Fragment Length Polymorphism Analysis

(2014) Arihiro Shiozaki et al.   PLoS One

Immunomodulatory Properties of Streptococcus and Veillonella Isolates from the Human Small Intestine Microbiota

(2014) Bartholomeus van den Bogert et al.   PLoS One

Maternal short-chain fatty acids are associated with metabolic parameters in mothers and newborns

(2014) Medha Priyadarshini et al.   Translational Research

Gut microbiome of the Hadza hunter-gatherers

(2014) Stephanie L. Schnorr et al.   Nature Communications

High-fat maternal diet during pregnancy persistently alters the offspring microbiome in a primate model

(2014) Jun Ma et al.   Nature Communications

Identification and Expression of Genes Involved in the Conversion of Daidzein and Genistein by the Equol-Forming Bacterium Slackia isoflavoniconvertens

(2013) Christine Schröder et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Stability of the Maternal Gut Microbiota During Late Pregnancy and Early Lactation

(2013) Ted Jost et al.   CURRENT MICROBIOLOGY

Dietary Fat Content and Fiber Type Modulate Hind Gut Microbial Community and Metabolic Markers in the Pig

(2013) Hui Yan et al.   PLoS One

Gut Microbiomes of Malawian Twin Pairs Discordant for Kwashiorkor

(2013) M. I. Smith et al.   SCIENCE

Host Remodeling of the Gut Microbiome and Metabolic Changes during Pregnancy

(2012) Omry Koren et al.   CELL

Anxiety, depression and stress in pregnancy

(2012) Christine Dunkel Schetter et al.   CURRENT OPINION IN PSYCHIATRY

The Pyrimidine Nucleotide Biosynthetic Pathway Modulates Production of Biofilm Determinants in Escherichia coli

(2012) Marco Garavaglia et al.   PLoS One

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome

(2012) Sahar Abubucker et al.   PLoS Computational Biology

Neuromodulation by soy diets or equol: Anti-depressive & anti-obesity-like influences, age- & hormone-dependent effects

(2011) Crystal Blake et al.   BMC NEUROSCIENCE

Interleukin 6 Underlies Angiotensin II–Induced Hypertension and Chronic Renal Damage

(2011) Weiru Zhang et al.   HYPERTENSION

Daidzein and Genistein Are Converted to Equol and 5-Hydroxy-Equol by Human Intestinal Slackia isoflavoniconvertens in Gnotobiotic Rats

(2011) Anastasia Matthies et al.   JOURNAL OF NUTRITION

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Gut microbiota composition is associated with body weight, weight gain and biochemical parameters in pregnant women

(2010) A. Santacruz et al.   BRITISH JOURNAL OF NUTRITION

Impact of dietary counselling and probiotic intervention on maternal anthropometric measurements during and after pregnancy: A randomized placebo-controlled trial

(2010) Johanna Ilmonen et al.   CLINICAL NUTRITION

The pros and cons of phytoestrogens

(2010) Heather B. Patisaul et al.   FRONTIERS IN NEUROENDOCRINOLOGY

Obesity in Pregnancy: Implications for the Mother and Lifelong Health of the Child. A Consensus Statement

(2010) Lucilla Poston et al.   PEDIATRIC RESEARCH

Membrane sphingolipids as essential molecular signals for Bacteroides survival in the intestine

(2010) D. An et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

(2010) C. De Filippo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA