Fungal denitrification revisited – Recent advancements and future opportunities

Contribution of pathogenic fungi to N2O emissions increases temporally in intensively managed strawberry cropping soil

(2021) Ying Huang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Enhanced nitrate removal from surface water in a denitrifying woodchip bioreactor with a heterotrophic nitrifying and aerobic denitrifying fungus

(2020) Zongbao Yao et al.   BIORESOURCE TECHNOLOGY

Chemodenitrification by Fe(II) and nitrite: pH effect, mineralization and kinetic modeling

(2020) Dandan Chen et al.   CHEMICAL GEOLOGY

NO and N 2 O transformations of diverse fungi in hypoxia: evidence for anaerobic respiration only in Fusarium strains

(2020) Christoph Keuschnig et al.   ENVIRONMENTAL MICROBIOLOGY

Regulators of nitric oxide signaling triggered by host perception in a plant pathogen

(2020) Yi Ding et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Abiotic Transient Nitrite Occurrences from Nitrate Reduction through Goethite-Mediated Fe(III)/Fe(II) Cycle with Labile Organic Materials and Ammonia

(2020) Hyeoksun Choi et al.   Water

What can we learn from N 2 O isotope data? – Analytics, processes and modelling

(2020) Longfei Yu et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Evaluation of N2O sources after fertilizers application in vegetable soil by dual isotopocule plots approach

(2020) Wei Lin et al.   ENVIRONMENTAL RESEARCH

Geochemical and isotopic study of abiotic nitrite reduction coupled to biologically produced Fe(II) oxidation in marine environments

(2020) R. Benaiges-Fernandez et al.   CHEMOSPHERE

Nitrite induced transcription of p450nor during denitrification by Fusarium oxysporum correlates with the production of N2O with a high 15N site preference

(2020) Lena Rohe et al.   SOIL BIOLOGY & BIOCHEMISTRY

Characterization of Fungal nirK-Containing Communities and N2O Emission From Fungal Denitrification in Arable Soils

(2019) Huifang Xu et al.   Frontiers in Microbiology

Continuing Impacts of Selective Inhibition on Bacterial and Fungal Communities in an Agricultural Soil

(2019) Yanshuo Pan et al.   MICROBIAL ECOLOGY

Ecological implications of recently discovered and poorly studied sources of energy for the growth of true fungi especially in extreme environments

(2019) Frank H. Gleason et al.   Fungal Ecology

Metagenomic analysis reveals distinct patterns of denitrification gene abundance across soil moisture, nitrate gradients

(2019) Sarah A. Nadeau et al.   ENVIRONMENTAL MICROBIOLOGY

An evaluation of primers for detecting denitrifiers via their functional genes

(2019) Yanjun Ma et al.   ENVIRONMENTAL MICROBIOLOGY

Denitrifying Bacteria Active in Woodchip Bioreactors at Low-Temperature Conditions

(2019) Jeonghwan Jang et al.   Frontiers in Microbiology

Nitric oxide in plant–fungal interactions

(2019) Ainhoa Martínez-Medina et al.   JOURNAL OF EXPERIMENTAL BOTANY

N2O formation by nitrite-induced (chemo)denitrification in coastal marine sediment

(2019) Julia M. Otte et al.   Scientific Reports

Anammox co-fungi accompanying denitrifying bacteria are the thieves of the nitrogen cycle in paddy-wheat crop rotated soils

(2019) Touqeer Abbas et al.   ENVIRONMENT INTERNATIONAL

Using metagenomics to reveal landscape scale patterns of denitrifiers in a montane forest ecosystem

(2019) C. Armanda Roco et al.   SOIL BIOLOGY & BIOCHEMISTRY

Aerobic denitrification performance and nitrate removal pathway analysis of a novel fungus Fusarium solani RADF-77

(2019) Hai-Yan Cheng et al.   BIORESOURCE TECHNOLOGY

Quantifying N2O reduction to N2 during denitrification in soils via isotopic mapping approach: Model evaluation and uncertainty analysis

(2019) Di Wu et al.   ENVIRONMENTAL RESEARCH

First real-time isotopic characterisation of N2O from chemodenitrification

(2019) Jing Wei et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Role of Chemodenitrification for N2O Emissions from Nitrate Reduction in Rice Paddy Soils

(2019) Milan Wang et al.   ACS Earth and Space Chemistry

NAD+/NADH homeostasis affects metabolic adaptation to hypoxia and secondary metabolite production in filamentous fungi

(2018) Motoyuki Shimizu   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

dPCR: A Technology Review

(2018) Phenix-Lan Quan et al.   SENSORS

Biological nitrogen removal and metabolic characteristics of a novel aerobic denitrifying fungus Hanseniaspora uvarum strain KPL108

(2018) Haihan Zhang et al.   BIORESOURCE TECHNOLOGY

Phylogenomics Reveal the Dynamic Evolution of Fungal Nitric Oxide Reductases and Their Relationship to Secondary Metabolism

(2018) Steven A Higgins et al.   Genome Biology and Evolution

Presence of Cu-Type (NirK) and cd1-Type (NirS) Nitrite Reductase Genes in the Denitrifying Bacterium Bradyrhizobium nitroreducens sp. nov.

(2018) Jeonghwan Jang et al.   MICROBES AND ENVIRONMENTS

Design and Feasibility Analysis of a Self-Sustaining Biofiltration System for Removal of Low Concentration N2O Emitted from Wastewater Treatment Plants

(2017) Hyun Yoon et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Discovery of Fungal Denitrification Inhibitors by Targeting Copper Nitrite Reductase from Fusarium oxysporum

(2017) Masaki Matsuoka et al.   Journal of Chemical Information and Modeling

Fungal and bacterial contributions to codenitrification emissions of N2O and N2 following urea deposition to soil

(2017) David Rex et al.   NUTRIENT CYCLING IN AGROECOSYSTEMS

Use of oxygen isotopes to differentiate between nitrous oxide produced by fungi or bacteria during denitrification

(2017) Lena Rohe et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

High temperatures inhibited the growth of soil bacteria and archaea but not that of fungi and altered nitrous oxide production mechanisms from different nitrogen sources in an acidic soil

(2017) Xiaoya Xu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Evidence for fungal and chemodenitrification based N2O flux from nitrogen impacted coastal sediments

(2017) Scott D. Wankel et al.   Nature Communications

Influence of soil moisture on codenitrification fluxes from a urea-affected pasture soil

(2017) Timothy J. Clough et al.   Scientific Reports

NovelP450norGene Detection Assay Used To Characterize the Prevalence and Diversity of Soil Fungal Denitrifiers

(2016) Amy Novinscak et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Detection and Diversity of Fungal Nitric Oxide Reductase Genes (p450nor) in Agricultural Soils

(2016) Steven A. Higgins et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Nitric oxide in fungi: is there NO light at the end of the tunnel?

(2016) David Cánovas et al.   CURRENT GENETICS

Ecology and physiology of anaerobic ammonium oxidizing bacteria

(2016) Mamoru Oshiki et al.   ENVIRONMENTAL MICROBIOLOGY

Detection of N 2 O-producing fungi in environment using nitrite reductase gene ( nirK )-targeting primers

(2016) Huaihai Chen et al.   Fungal Biology

Denitrification and Nitrate-Dependent Fe(II) Oxidation in Various Pseudogulbenkiania Strains

(2016) Satoshi Ishii et al.   MICROBES AND ENVIRONMENTS

Probing the biological sources of soil N 2 O emissions by quantum cascade laser-based 15 N isotopocule analysis

(2016) Huaihai Chen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Chemical formation of hybrid di-nitrogen calls fungal codenitrification into question

(2016) Rebecca L. Phillips et al.   Scientific Reports

The importance of abiotic reactions for nitrous oxide production

(2015) Xia Zhu-Barker et al.   BIOGEOCHEMISTRY

Phylogenetic, taxonomic and functional diversity of fungal denitrifiers and associated N2O production efficacy

(2015) Nape Mothapo et al.   SOIL BIOLOGY & BIOCHEMISTRY

Development of PCR primers targeting fungal nirK to study fungal denitrification in the environment

(2015) Wei Wei et al.   SOIL BIOLOGY & BIOCHEMISTRY

N2O production, a widespread trait in fungi

(2015) Koki Maeda et al.   Scientific Reports

Confirmation of co-denitrification in grazed grassland

(2015) Diana R. Selbie et al.   Scientific Reports

Dissimilatory nitrate reduction by Aspergillus terreus isolated from the seasonal oxygen minimum zone in the Arabian Sea

(2014) Peter Stief et al.   BMC MICROBIOLOGY

Model complexes of key intermediates in fungal cytochrome P450 nitric oxide reductase (P450nor)

(2014) Ashley B McQuarters et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Identification of key nitrous oxide production pathways in aerobic partial nitrifying granules

(2014) Satoshi Ishii et al.   ENVIRONMENTAL MICROBIOLOGY

Isotopic Fractionation by a Fungal P450 Nitric Oxide Reductase during the Production of N2O

(2014) Hui Yang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Site-specific 15N isotopic signatures of abiotically produced N2O

(2014) Jannis Heil et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Soil Moisture and pH Control Relative Contributions of Fungi and Bacteria to N2O Production

(2014) Huaihai Chen et al.   MICROBIAL ECOLOGY

Evidence for biological denitrification inhibition (BDI) by plant secondary metabolites

(2014) Clément Bardon et al.   NEW PHYTOLOGIST

Dual isotope and isotopomer signatures of nitrous oxide from fungal denitrification - a pure culture study

(2014) Lena Rohe et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

The significant contribution of fungi to soil N2O production across diverse ecosystems

(2013) Huaihai Chen et al.   APPLIED SOIL ECOLOGY

Fungi mediate nitrous oxide production but not ammonia oxidation in aridland soils of the southwestern US

(2013) Yevgeniy Marusenko et al.   SOIL BIOLOGY & BIOCHEMISTRY

Nitrous oxide producing activity of diverse fungi from distinct agroecosystems

(2013) Nape V. Mothapo et al.   SOIL BIOLOGY & BIOCHEMISTRY

N2O emission from cropland field soil through fungal denitrification after surface applications of organic fertilizer

(2013) Wei Wei et al.   SOIL BIOLOGY & BIOCHEMISTRY

Co-Occurring Anammox, Denitrification, and Codenitrification in Agricultural Soils

(2012) Andrew Long et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Increased fungal dominance in N2O emission hotspots along a natural pH gradient in organic forest soil

(2012) T. Rütting et al.   BIOLOGY AND FERTILITY OF SOILS

Fungal denitrification and nitric oxide reductase cytochrome P450nor

(2012) H. Shoun et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Novel laser spectroscopic technique for continuous analysis of N2O isotopomers - application and intercomparison with isotope ratio mass spectrometry

(2012) Jan Reent Köster et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Fungal and bacterial denitrification are differently affected by long-term pH amendment and cultivation of arable soil

(2012) Miriam B. Herold et al.   SOIL BIOLOGY & BIOCHEMISTRY

Formation of hybrid N2O and hybrid N2 due to codenitrification: First review of a barely considered process of microbially mediated N-nitrosation

(2011) Oliver Spott et al.   SOIL BIOLOGY & BIOCHEMISTRY

Reduced iron induced nitric oxide and nitrous oxide emission

(2011) Marlies J. Kampschreur et al.   WATER RESEARCH

Isolation of Oligotrophic Denitrifiers Carrying Previously Uncharacterized Functional Gene Sequences

(2010) Satoshi Ishii et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Possible Involvement of Copper-Containing Nitrite Reductase (NirK) and Flavohemoglobin in Denitrification by the FungusCylindrocarpon tonkinense

(2010) Sang-Wan KIM et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Denitrifying bioreactors—An approach for reducing nitrate loads to receiving waters

(2010) Louis A. Schipper et al.   ECOLOGICAL ENGINEERING

Phylogenetic and Functional Diversity of Denitrifying Bacteria Isolated from Various Rice Paddy and Rice-Soybean Rotation Fields

(2010) Kanako Tago et al.   MICROBES AND ENVIRONMENTS

Structural Basis of Biological N2O Generation by Bacterial Nitric Oxide Reductase

(2010) T. Hino et al.   SCIENCE

Eukaryotic nirK Genes Encoding Copper-Containing Nitrite Reductase: Originating from the Protomitochondrion?

(2009) S.-W. Kim et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effect of acetate on soil respiration, N2O emissions and gross N transformations related to fungi and bacteria in a grassland soil

(2009) R.J. Laughlin et al.   APPLIED SOIL ECOLOGY

The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments

(2009) S. A. Bustin et al.   CLINICAL CHEMISTRY

Nitrous Oxide (N2O): The Dominant Ozone-Depleting Substance Emitted in the 21st Century

(2009) A. R. Ravishankara et al.   SCIENCE

Contrasting Short-Term Antibiotic Effects on Respiration and Bacterial Growth Compromises the Validity of the Selective Respiratory Inhibition Technique to Distinguish Fungi and Bacteria

(2008) Johannes Rousk et al.   MICROBIAL ECOLOGY

Isotopologue fractionation during N2O production by fungal denitrification

(2008) Robin L. Sutka et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

A review of stable isotope techniques for N2O source partitioning in soils: recent progress, remaining challenges and future considerations

(2008) E. M. Baggs   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Anaerobic denitrification in fungi from the coastal marine sediments off Goa, India

(2008) Sumathi J. Cathrine et al.