Genome skimming reveals novel plastid markers for the molecular identification of illegally logged African timber species

CPGAVAS2, an integrated plastome sequence annotator and analyzer

(2019) Linchun Shi et al.   NUCLEIC ACIDS RESEARCH

Characterization of the complete chloroplast genome sequence of Dalbergia species and its phylogenetic implications

(2019) Yun Song et al.   Scientific Reports

Developing forensic tools for an African timber: Regional origin is revealed by genetic characteristics, but not by isotopic signature

(2018) Mart Vlam et al.   BIOLOGICAL CONSERVATION

Complete Chloroplast Genome Sequences of Four Meliaceae Species and Comparative Analyses

(2018) Malte Mader et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Chloroplast genomic resources for phylogeny and DNA barcoding: a case study on Fritillaria

(2018) Yu Bi et al.   Scientific Reports

DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets

(2017) Julio Rozas et al.   MOLECULAR BIOLOGY AND EVOLUTION

A molecular-dated phylogeny and biogeography of the monotypic legume genus Haplormosia , a missing African branch of the otherwise American-Australian Brongniartieae clade

(2017) Domingos Cardoso et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Advances in DNA metabarcoding for food and wildlife forensic species identification

(2016) Martijn Staats et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

From barcodes to genomes: extending the concept of DNA barcoding

(2016) Eric Coissac et al.   MOLECULAR ECOLOGY

Strategies for complete plastid genome sequencing

(2016) Alex D. Twyford et al.   Molecular Ecology Resources

Telling plant species apart with DNA: from barcodes to genomes

(2016) Peter M. Hollingsworth et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

How precise can wood identification be? Wood anatomy’s role in support of the legal timber trade, especially cites

(2016)   IAWA JOURNAL

The Use of DNA Barcoding in Identification and Conservation of Rosewood (Dalbergia spp.)

(2015) Ida Hartvig et al.   PLoS One

OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets

(2013) Marc Lohse et al.   NUCLEIC ACIDS RESEARCH

How Effective Are DNA Barcodes in the Identification of African Rainforest Trees?

(2013) Ingrid Parmentier et al.   PLoS One

Revisiting the phylogeny of papilionoid legumes: New insights from comprehensively sampled early-branching lineages

(2012) Domingos Cardoso et al.   AMERICAN JOURNAL OF BOTANY

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Capturing the Biofuel Wellhead and Powerhouse: The Chloroplast and Mitochondrial Genomes of the Leguminous Feedstock Tree Pongamia pinnata

(2012) Stephen H. Kazakoff et al.   PLoS One

The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

(2011) Susann Wicke et al.   PLANT MOLECULAR BIOLOGY

Refining the DNA barcode for land plants

(2011) P. M. Hollingsworth   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated into the core barcode for seed plants

(2011) et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: thetrnL approach

(2009) ALICE VALENTINI et al.   Molecular Ecology Resources

A DNA barcode for land plants

(2009) et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA