microRNAs differentially modulated in response to heat and drought stress in durum wheat cultivars with contrasting water use efficiency

microRNA-dependent gene regulatory networks in maize leaf senescence

(2016) Xiangyuan Wu et al.   BMC PLANT BIOLOGY

Water-deficit stress-responsive microRNAs and their targets in four durum wheat genotypes

(2016) Haipei Liu et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Differential expression of microRNAs and potential targets under drought stress in barley

(2016) Jannatul Ferdous et al.   PLANT CELL AND ENVIRONMENT

Gamma-aminobutyric acid depletion affects stomata closure and drought tolerance of Arabidopsis thaliana

(2016) Dereje Worku Mekonnen et al.   PLANT SCIENCE

Identification of four functionally important microRNA families with contrasting differential expression profiles between drought-tolerant and susceptible rice leaf at vegetative stage

(2015) Boon Huat Cheah et al.   BMC GENOMICS

miRVine: a microRNA expression atlas of grapevine based on small RNA sequencing

(2015) Jayakumar Belli Kullan et al.   BMC GENOMICS

Identification and comparative analysis of differentially expressed miRNAs in leaves of two wheat (Triticum aestivum L.) genotypes during dehydration stress

(2015) Xingli Ma et al.   BMC PLANT BIOLOGY

OsGRAS23, a rice GRAS transcription factor gene, is involved in drought stress response through regulating expression of stress-responsive genes

(2015) Kai Xu et al.   BMC PLANT BIOLOGY

Root precursors of microRNAs in wild emmer and modern wheats show major differences in response to drought stress

(2015) Bala Ani Akpinar et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Stress responsive miRNAs and isomiRs in cereals

(2015) Hikmet Budak et al.   PLANT SCIENCE

Post-transcriptional and post-translational regulations of drought and heat response in plants: a spider’s web of mechanisms

(2015) Davide Guerra et al.   Frontiers in Plant Science

Genome-Wide Identification of MicroRNAs in Leaves and the Developing Head of Four Durum Genotypes during Water Deficit Stress

(2015) Haipei Liu et al.   PLoS One

Involvement of miR164- and miR167-mediated target gene expressions in responses to water deficit in cassava

(2014) P. Phookaew et al.   BIOLOGIA PLANTARUM

Differential expression of microRNAs and other small RNAs in barley between water and drought conditions

(2014) Michael Hackenberg et al.   PLANT BIOTECHNOLOGY JOURNAL

Role of aquaporins in determining transpiration and photosynthesis in water-stressed plants: crop water-use efficiency, growth and yield

(2014) MENACHEM MOSHELION et al.   PLANT CELL AND ENVIRONMENT

Genome-Wide Analysis of MicroRNAs and Their Target Genes Related to Leaf Senescence of Rice

(2014) Xiangbin Xu et al.   PLoS One

Molecular mapping of stomatal-conductance-related traits in durum wheat (Triticum turgidumssp.durum)

(2013) G. Panio et al.   ANNALS OF APPLIED BIOLOGY

Genetic Engineering and Breeding of Drought-Resistant Crops

(2013) Honghong Hu et al.   Annual Review of Plant Biology

Different stress responsive strategies to drought and heat in two durum wheat cultivars with contrasting water use efficiency

(2013) Alessio Aprile et al.   BMC GENOMICS

Emerging roles of microRNAs in the mediation of drought stress response in plants

(2013) Yanfei Ding et al.   JOURNAL OF EXPERIMENTAL BOTANY

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

Regulation of FLOWERING LOCUS T by a MicroRNA in Brachypodium distachyon

(2013) L. Wu et al.   PLANT CELL

Biogenesis, Turnover, and Mode of Action of Plant MicroRNAs

(2013) K. Rogers et al.   PLANT CELL

Overexpression of plasma membrane H+-ATPase in guard cells promotes light-induced stomatal opening and enhances plant growth

(2013) Y. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ShortStack: Comprehensive annotation and quantification of small RNA genes

(2013) M. J. Axtell   RNA

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Identification of novel and conserved Populus tomentosa microRNA as components of a response to water stress

(2012) Yuanyuan Ren et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Addressing the Role of microRNAs in Reprogramming Leaf Growth during Drought Stress in Brachypodium distachyon

(2012) Edoardo Bertolini et al.   Molecular Plant

OsTIR1 and OsAFB2 Downregulation via OsmiR393 Overexpression Leads to More Tillers, Early Flowering and Less Tolerance to Salt and Drought in Rice

(2012) Kuaifei Xia et al.   PLoS One

TamiR159 Directed Wheat TaGAMYB Cleavage and Its Involvement in Anther Development and Heat Response

(2012) Yu Wang et al.   PLoS One

The Rice R2R3-MYB Transcription Factor OsMYB55 Is Involved in the Tolerance to High Temperature and Modulates Amino Acid Metabolism

(2012) Ashraf El-kereamy et al.   PLoS One

Functions of microRNAs in plant stress responses

(2012) Ramanjulu Sunkar et al.   TRENDS IN PLANT SCIENCE

Analysis of calcium signaling pathways in plants

(2011) Oliver Batistič et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Identification and comparative analysis of drought-associated microRNAs in two cowpea genotypes

(2011) Blanca E Barrera-Figueroa et al.   BMC PLANT BIOLOGY

FLOWERING LOCUS T Regulates Stomatal Opening

(2011) Toshinori Kinoshita et al.   CURRENT BIOLOGY

Constitutive differences in water use efficiency between two durum wheat cultivars

(2011) Fulvia Rizza et al.   FIELD CROPS RESEARCH

Evolution and Functional Diversification ofMIRNAGenes

(2011) Josh T. Cuperus et al.   PLANT CELL

The Phaseolus vulgaris miR159a precursor encodes a second differentially expressed microRNA

(2011) Cecilia Contreras-Cubas et al.   PLANT MOLECULAR BIOLOGY

The Language of Calcium Signaling

(2010) Antony N. Dodd et al.   Annual Review of Plant Biology

Over-expression of microRNA169 confers enhanced drought tolerance to tomato

(2010) Xiaohui Zhang et al.   BIOTECHNOLOGY LETTERS

Unique functionality of 22-nt miRNAs in triggering RDR6-dependent siRNA biogenesis from target transcripts in Arabidopsis

(2010) Josh T Cuperus et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

miRNA expression patterns of Triticum dicoccoides in response to shock drought stress

(2010) Melda Kantar et al.   PLANTA

22-nucleotide RNAs trigger secondary siRNA biogenesis in plants

(2010) H.-M. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple distinct small RNAs originate from the same microRNA precursors

(2010) Weixiong Zhang et al.   GENOME BIOLOGY

Small RNAs and Their Roles in Plant Development

(2009) Xuemei Chen   Annual Review of Cell and Developmental Biology

Members of miR-169 family are induced by high salinity and transiently inhibit the NF-YA transcription factor

(2009) Botao Zhao et al.   BMC MOLECULAR BIOLOGY

A loop-to-base processing mechanism underlies the biogenesis of plant microRNAs miR319 and miR159

(2009) Nicolás G Bologna et al.   EMBO JOURNAL

Sliced microRNA targets and precise loop-first processing of MIR319 hairpins revealed by analysis of the Physcomitrella patens degradome

(2009) C. Addo-Quaye et al.   RNA

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

The Arabidopsis NFYA5 Transcription Factor Is Regulated Transcriptionally and Posttranscriptionally to Promote Drought Resistance

(2008) W.-X. Li et al.   PLANT CELL

Criteria for Annotation of Plant MicroRNAs

(2008) B. C. Meyers et al.   PLANT CELL

The Nuclear Factor Y subunits NF-YB2 and NF-YB3 play additive roles in the promotion of flowering by inductive long-day photoperiods in Arabidopsis

(2008) Roderick W. Kumimoto et al.   PLANTA

Drought tolerance improvement in crop plants: An integrated view from breeding to genomics

(2007) Luigi Cattivelli et al.   FIELD CROPS RESEARCH