Verrucomicrobial methanotrophs grow on diverse C3 compounds and use a homolog of particulate methane monooxygenase to oxidize acetone
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Verrucomicrobial methanotrophs grow on diverse C3 compounds and use a homolog of particulate methane monooxygenase to oxidize acetone
Authors
Keywords
-
Journal
ISME Journal
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-06-22
DOI
10.1038/s41396-021-01037-2
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Growth on Formic Acid Is Dependent on Intracellular pH Homeostasis for the Thermoacidophilic Methanotroph Methylacidiphilum sp. RTK17.1
- (2021) Carlo R. Carere et al. Frontiers in Microbiology
- Methanol production by Methylacidiphilum fumariolicum SolV under different growth conditions
- (2020) Carmen Hogendoorn et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Genome Scale Metabolic Model of the versatile methanotroph Methylocella silvestris
- (2020) Sergio Bordel et al. Microbial Cell Factories
- More Than a Methanotroph: A Broader Substrate Spectrum for Methylacidiphilum fumariolicum SolV
- (2020) Nunzia Picone et al. Frontiers in Microbiology
- Biological conversion of propane to 2-propanol using group I and II methanotrophs as biocatalysts
- (2019) Thu Thi Nguyen et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- The GMC superfamily of oxidoreductases revisited: analysis and evolution of fungal GMC oxidoreductases
- (2019) Leander Sützl et al. Biotechnology for Biofuels
- Particulate methane monooxygenase contains only mononuclear copper centers
- (2019) Matthew O. Ross et al. SCIENCE
- Global Biogeographic Distribution Patterns of Thermoacidophilic Verrucomicrobia Methanotrophs Suggest Allopatric Evolution
- (2019) Helge-André Erikstad et al. Frontiers in Microbiology
- Native top-down mass spectrometry provides insights into the copper centers of membrane-bound methane monooxygenase
- (2019) Soo Y. Ro et al. Nature Communications
- Complete genome sequence analysis of the thermoacidophilic verrucomicrobial methanotroph “Candidatus Methylacidiphilum kamchatkense” strain Kam1 and comparison with its closest relatives
- (2019) Thomas Kruse et al. BMC GENOMICS
- Hydrogen Oxidation Influences Glycogen Accumulation in a Verrucomicrobial Methanotroph
- (2019) Carlo R. Carere et al. Frontiers in Microbiology
- Escalating CO2 degassing at the Pisciarelli fumarolic system, and implications for the ongoing Campi Flegrei unrest
- (2019) G. Tamburello et al. JOURNAL OF VOLCANOLOGY AND GEOTHERMAL RESEARCH
- Novel facultative Methylocella strains are active methane consumers at terrestrial natural gas seeps
- (2019) Muhammad Farhan Ul Haque et al. Microbiome
- Novel copper-containing membrane monooxygenases (CuMMOs) encoded by alkane-utilizing Betaproteobacteria
- (2019) Fauziah F. Rochman et al. ISME Journal
- Methane-yielding microbial communities processing lactate-rich substrates: a piece of the anaerobic digestion puzzle
- (2018) Anna Detman et al. Biotechnology for Biofuels
- Methanotrophy across a natural permafrost thaw environment
- (2018) Caitlin M Singleton et al. ISME Journal
- GLYI and D-LDH play key role in methylglyoxal detoxification and abiotic stress tolerance
- (2018) Muskan Jain et al. Scientific Reports
- Characterization of a long overlooked copper protein from methane- and ammonia-oxidizing bacteria
- (2018) Oriana S. Fisher et al. Nature Communications
- Evolutionary History of Copper Membrane Monooxygenases
- (2018) Roshan Khadka et al. Frontiers in Microbiology
- Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies
- (2017) INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Mixotrophy drives niche expansion of verrucomicrobial methanotrophs
- (2017) Carlo R Carere et al. ISME Journal
- Selective bio-oxidation of propane to acetone using methane-oxidizing Methylomonas sp. DH-1
- (2017) Dong Hoon Hur et al. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY
- Recognition of prokaryotic and eukaryotic promoters using convolutional deep learning neural networks
- (2017) Ramzan Kh. Umarov et al. PLoS One
- Methylacidiphilum fumariolicum SolV, a thermoacidophilic ‘Knallgas’ methanotroph with both an oxygen-sensitive and -insensitive hydrogenase
- (2016) Sepehr Mohammadi et al. ISME Journal
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Thermophilic archaea activate butane via alkyl-coenzyme M formation
- (2016) Rafael Laso-Pérez et al. NATURE
- NCBI prokaryotic genome annotation pipeline
- (2016) Tatiana Tatusova et al. NUCLEIC ACIDS RESEARCH
- Methane oxidation coupled to nitrate reduction under hypoxia by the GammaproteobacteriumMethylomonas denitrificans, sp. nov. type strain FJG1
- (2015) K. Dimitri Kits et al. ENVIRONMENTAL MICROBIOLOGY
- Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
- (2015) Alma E. Parada et al. ENVIRONMENTAL MICROBIOLOGY
- Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains
- (2015) William B Whitman et al. Standards in Genomic Sciences
- Diversity and Habitat Preferences of Cultivated and Uncultivated Aerobic Methanotrophic Bacteria Evaluated Based on pmoA as Molecular Marker
- (2015) Claudia Knief Frontiers in Microbiology
- Diverse electron sources support denitrification under hypoxia in the obligate methanotroph Methylomicrobium album strain BG8
- (2015) K. Dimitri Kits et al. Frontiers in Microbiology
- Expanding the Verrucomicrobial Methanotrophic World: Description of Three Novel Species of Methylacidimicrobium gen. nov.
- (2014) Muriel C. F. van Teeseling et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- The genomic landscape of the verrucomicrobial methanotroph Methylacidiphilum fumariolicum SolV
- (2014) Seyed Anvar et al. BMC GENOMICS
- Distribution and diversity ofVerrucomicrobiamethanotrophs in geothermal and acidic environments
- (2014) Christine E. Sharp et al. ENVIRONMENTAL MICROBIOLOGY
- Mutagenesis of the hydrocarbon monooxygenase indicates a metal centre in subunit-C, and not subunit-B, is essential for copper-containing membrane monooxygenase activity
- (2014) E. F. Liew et al. MICROBIOLOGY-SGM
- Trace-gas metabolic versatility of the facultative methanotroph Methylocella silvestris
- (2014) Andrew T. Crombie et al. NATURE
- Rare earth metals are essential for methanotrophic life in volcanic mudpots
- (2013) Arjan Pol et al. ENVIRONMENTAL MICROBIOLOGY
- Responses of the terrestrial ammonia-oxidizing archaeonCa. Nitrososphaera viennensis and the ammonia-oxidizing bacteriumNitrosospira multiformisto nitrification inhibitors
- (2013) Tianlin Shen et al. FEMS MICROBIOLOGY LETTERS
- Natural seepage of shale gas and the origin of “eternal flames” in the Northern Appalachian Basin, USA
- (2013) Giuseppe Etiope et al. MARINE AND PETROLEUM GEOLOGY
- Ultrafast clustering algorithms for metagenomic sequence analysis
- (2012) W. Li et al. BRIEFINGS IN BIOINFORMATICS
- Differential expression of particulate methane monooxygenase genes in the verrucomicrobial methanotroph ‘Methylacidiphilum kamchatkense’ Kam1
- (2012) Helge-André Erikstad et al. EXTREMOPHILES
- Methylocystis bryophila sp. nov., a facultatively methanotrophic bacterium from acidic Sphagnum peat, and emended description of the genus Methylocystis (ex Whittenbury et al. 1970) Bowman et al. 1993
- (2012) S. E. Belova et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Anaerobic degradation of propane and butane by sulfate-reducing bacteria enriched from marine hydrocarbon cold seeps
- (2012) Ulrike Jaekel et al. ISME Journal
- Comparison of One- and Two-dimensional Liquid Chromatography Approaches in the Label-free Quantitative Analysis of Methylocella silvestris
- (2012) Nisha A. Patel et al. JOURNAL OF PROTEOME RESEARCH
- Twin-arginine-dependent translocation of folded proteins
- (2012) J. Frobel et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- FLASH: fast length adjustment of short reads to improve genome assemblies
- (2011) T. Magoc et al. BIOINFORMATICS
- Hydrocarbon monooxygenase in Mycobacterium: recombinant expression of a member of the ammonia monooxygenase superfamily
- (2011) Nicholas V Coleman et al. ISME Journal
- Autotrophic Methanotrophy in Verrucomicrobia: Methylacidiphilum fumariolicumSolV Uses the Calvin-Benson-Bassham Cycle for Carbon Dioxide Fixation
- (2011) A. F. Khadem et al. JOURNAL OF BACTERIOLOGY
- ARNold: A web tool for the prediction of Rho-independent transcription terminators
- (2011) Magali Naville et al. RNA Biology
- The membrane-associated monooxygenase in the butane-oxidizing Gram-positive bacteriumNocardioidessp. strain CF8 is a novel member of the AMO/PMO family
- (2011) Luis A. Sayavedra-Soto et al. Environmental Microbiology Reports
- Bioremediation via Methanotrophy: Overview of Recent Findings and Suggestions for Future Research
- (2011) Jeremy D. Semrau Frontiers in Microbiology
- Nitrification and degradation of halogenated hydrocarbons—a tenuous balance for ammonia-oxidizing bacteria
- (2010) Luis A. Sayavedra-Soto et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Complete Genome Sequence of the Aerobic Facultative Methanotroph Methylocella silvestris BL2
- (2010) Y. Chen et al. JOURNAL OF BACTERIOLOGY
- Long-term variations of the Campi Flegrei, Italy, volcanic system as revealed by the monitoring of hydrothermal activity
- (2010) G. Chiodini et al. JOURNAL OF GEOPHYSICAL RESEARCH
- Oxidation of methane by a biological dicopper centre
- (2010) Ramakrishnan Balasubramanian et al. NATURE
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- A novel family of functional operons encoding methane/ammonia monooxygenase-related proteins in gammaproteobacterial methanotrophs
- (2010) Patricia L. Tavormina et al. Environmental Microbiology Reports
- Acetate utilization as a survival strategy of peat-inhabiting Methylocystis spp.
- (2010) Svetlana E. Belova et al. Environmental Microbiology Reports
- Degradation of alkanes by bacteria
- (2009) Fernando Rojo ENVIRONMENTAL MICROBIOLOGY
- Ammonia cometabolism and product inhibition vary considerably among species of methanotrophic bacteria
- (2009) Györgyi Nyerges et al. FEMS MICROBIOLOGY LETTERS
- Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria
- (2009) Willm Martens-Habbena et al. NATURE
- Earth's Degassing: A Missing Ethane and Propane Source
- (2009) G. Etiope et al. SCIENCE
- Environmental, genomic and taxonomic perspectives on methanotrophicVerrucomicrobia
- (2009) Huub J. M. Op den Camp et al. Environmental Microbiology Reports
- Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia
- (2008) Shaobin Hou et al. Biology Direct
- Two isozymes of particulate methane monooxygenase with different methane oxidation kinetics are found in Methylocystis sp. strain SC2
- (2008) M. Baani et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Methane oxidation at 55 C and pH 2 by a thermoacidophilic bacterium belonging to the Verrucomicrobia phylum
- (2008) T. Islam et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started