Diversity and Habitat Preferences of Cultivated and Uncultivated Aerobic Methanotrophic Bacteria Evaluated Based on pmoA as Molecular Marker

Manure-associated stimulation of soil-borne methanogenic activity in agricultural soils

(2015) Adrian Ho et al.   BIOLOGY AND FERTILITY OF SOILS

Methane oxidation coupled to nitrate reduction under hypoxia by the GammaproteobacteriumMethylomonas denitrificans, sp. nov. type strain FJG1

(2015) K. Dimitri Kits et al.   ENVIRONMENTAL MICROBIOLOGY

Methane as a Resource: Can the Methanotrophs Add Value?

(2015) P. J. Strong et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Methylomagnum ishizawai gen. nov., sp. nov., a mesophilic type I methanotroph isolated from rice rhizosphere

(2015) Ashraf Khalifa et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methylocapsa palsarum sp. nov., a methanotroph isolated from a subArctic discontinuous permafrost ecosystem

(2015) Svetlana N. Dedysh et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Expanding the Verrucomicrobial Methanotrophic World: Description of Three Novel Species of Methylacidimicrobium gen. nov.

(2014) Muriel C. F. van Teeseling et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Distribution and diversity ofVerrucomicrobiamethanotrophs in geothermal and acidic environments

(2014) Christine E. Sharp et al.   ENVIRONMENTAL MICROBIOLOGY

Changes in methane oxidation activity and methanotrophic community composition in saline alkaline soils

(2014) Nancy Serrano-Silva et al.   EXTREMOPHILES

A guide to statistical analysis in microbial ecology: a community-focused, living review of multivariate data analyses

(2014) Pier Luigi Buttigieg et al.   FEMS MICROBIOLOGY ECOLOGY

Atmospheric methane oxidizers are present and active in Canadian high Arctic soils

(2014) Christine Martineau et al.   FEMS MICROBIOLOGY ECOLOGY

Methylomonas lenta sp. nov., a methanotroph isolated from manure and a denitrification tank

(2014) S. Hoefman et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methyloprofundus sedimenti gen. nov., sp. nov., an obligate methanotroph from ocean sediment belonging to the 'deep sea-1' clade of marine methanotrophs

(2014) P. L. Tavormina et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methyloparacoccus murrellii gen. nov., sp. nov., a methanotroph isolated from pond water

(2014) S. Hoefman et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methylocaldum marinum sp. nov., a thermotolerant, methane-oxidizing bacterium isolated from marine sediments, and emended description of the genus Methylocaldum

(2014) M. Takeuchi et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Diversity and methane oxidation of active epibiotic methanotrophs on live Shinkaia crosnieri

(2014) Tomo-o Watsuji et al.   ISME Journal

Weak phylogenetic signal in physiological traits of methane-oxidizing bacteria

(2014) S. Krause et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Uncultivated Methylocystis Species in Paddy Soil Include Facultative Methanotrophs that Utilize Acetate

(2014) Lingqin Leng et al.   MICROBIAL ECOLOGY

Aerobic Methanotroph Diversity in Sanjiang Wetland, Northeast China

(2014) Juanli Yun et al.   MICROBIAL ECOLOGY

Abundance and diversity of methanotrophic Gammaproteobacteria in northern wetlands

(2014) O. V. Danilova et al.   MICROBIOLOGY

Trace-gas metabolic versatility of the facultative methanotroph Methylocella silvestris

(2014) Andrew T. Crombie et al.   NATURE

The rise and fall of methanotrophy following a deepwater oil-well blowout

(2014) M. Crespo-Medina et al.   Nature Geoscience

Characterization and phylogeny of a novel methanotroph, Methyloglobulus morosus gen. nov., spec. nov

(2014) J.S. Deutzmann et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Aerobic methanotrophic communities at the Red Sea brine-seawater interface

(2014) Rehab Z. Abdallah et al.   Frontiers in Microbiology

Activity and abundance of methane-oxidizing bacteria in secondary forest and manioc plantations of Amazonian Dark Earth and their adjacent soils

(2014) Amanda B. Lima et al.   Frontiers in Microbiology

Classification of pmoA amplicon pyrosequences using BLAST and the lowest common ancestor method in MEGAN

(2014) Marc G. Dumont et al.   Frontiers in Microbiology

Ecology of aerobic methanotrophs in controlling methane fluxes from wetlands

(2013) Taniya Roy Chowdhury et al.   APPLIED SOIL ECOLOGY

Metabolic flexibility of enigmatic SAR324 revealed through metagenomics and metatranscriptomics

(2013) Cody S. Sheik et al.   ENVIRONMENTAL MICROBIOLOGY

Novel hydrocarbon monooxygenase genes in the metatranscriptome of a natural deep-sea hydrocarbon plume

(2013) Meng Li et al.   ENVIRONMENTAL MICROBIOLOGY

Methylomarinovum caldicuralii gen. nov., sp. nov., a moderately thermophilic methanotroph isolated from a shallow submarine hydrothermal system, and proposal of the family Methylothermaceae fam. nov.

(2013) H. Hirayama et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The (d)evolution of methanotrophy in the Beijerinckiaceae—a comparative genomics analysis

(2013) Ivica Tamas et al.   ISME Journal

LPSN—list of prokaryotic names with standing in nomenclature

(2013) Aidan C. Parte   NUCLEIC ACIDS RESEARCH

Microbial Communities of Deep-Sea Methane Seeps at Hikurangi Continental Margin (New Zealand)

(2013) S. Emil Ruff et al.   PLoS One

Aerobic methanotroph diversity in Riganqiao peatlands on the Qinghai-Tibetan Plateau

(2013) Yongcui Deng et al.   Environmental Microbiology Reports

Prerequisites for amplicon pyrosequencing of microbial methanol utilizers in the environment

(2013) Steffen Kolb et al.   Frontiers in Microbiology

Environmental Transcription ofmmoXby Methane-Oxidizing Proteobacteria in a Subarctic Palsa Peatland

(2012) Susanne Liebner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacterial symbionts ofBathymodiolusmussels andEscarpiatubeworms from Chapopote, an asphalt seep in the southern Gulf of Mexico

(2012) L. Raggi et al.   ENVIRONMENTAL MICROBIOLOGY

Differential expression of particulate methane monooxygenase genes in the verrucomicrobial methanotroph ‘Methylacidiphilum kamchatkense’ Kam1

(2012) Helge-André Erikstad et al.   EXTREMOPHILES

Methane-cycling communities in a permafrost-affected soil on Herschel Island, Western Canadian Arctic: active layer profiling ofmcrAandpmoAgenes

(2012) Béatrice A. Barbier et al.   FEMS MICROBIOLOGY ECOLOGY

Methylomonas paludis sp. nov., the first acid-tolerant member of the genus Methylomonas, from an acidic wetland

(2012) O. V. Danilova et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methylomarinum vadi gen. nov., sp. nov., a methanotroph isolated from two distinct marine environments

(2012) H. Hirayama et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methylocystis bryophila sp. nov., a facultatively methanotrophic bacterium from acidic Sphagnum peat, and emended description of the genus Methylocystis (ex Whittenbury et al. 1970) Bowman et al. 1993

(2012) S. E. Belova et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methanotrophic bacteria in oilsands tailings ponds of northern Alberta

(2012) Alireza Saidi-Mehrabad et al.   ISME Journal

Genome Sequence of the Methanotrophic Poly- -Hydroxybutyrate Producer Methylocystis parvus OBBP

(2012) C. del Cerro et al.   JOURNAL OF BACTERIOLOGY

Draft Genome Sequence of the Methane-Oxidizing Bacterium Methylococcus capsulatus (Texas)

(2012) Charlotte R. Kleiveland et al.   JOURNAL OF BACTERIOLOGY

Draft Genome Sequence of the Volcano-Inhabiting Thermoacidophilic Methanotroph Methylacidiphilum fumariolicum Strain SolV

(2012) A. F. Khadem et al.   JOURNAL OF BACTERIOLOGY

Isolation of Two Novel Marine Ethylene-Assimilating Bacteria, Haliea Species ETY-M and ETY-NAG, Containing Particulate Methane Monooxygenase-like Genes

(2012) Toshihiro Suzuki et al.   MICROBES AND ENVIRONMENTS

Composition of Methane-Oxidizing Bacterial Communities as a Function of Nutrient Loading in the Florida Everglades

(2012) Ashvini Chauhan et al.   MICROBIAL ECOLOGY

Conceptualizing functional traits and ecological characteristics of methane-oxidizing bacteria as life strategies

(2012) Adrian Ho et al.   Environmental Microbiology Reports

Abundance and distribution of diverse membrane-bound monooxygenase (Cu-MMO) genes within the Costa Rica oxygen minimum zone

(2012) Patricia L. Tavormina et al.   Environmental Microbiology Reports

Detection of autotrophic verrucomicrobial methanotrophs in a geothermal environment using stable isotope probing

(2012) Christine E. Sharp et al.   Frontiers in Microbiology

Microbial diversity in Frenulata (Siboglinidae, Polychaeta) species from mud volcanoes in the Gulf of Cadiz (NE Atlantic)

(2011) Clara F. Rodrigues et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

pmoAPrimers for Detection of Anaerobic Methanotrophs

(2011) Francisca A. Luesken et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Assessing and Improving Methods Used in Operational Taxonomic Unit-Based Approaches for 16S rRNA Gene Sequence Analysis

(2011) Patrick D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Activity and Diversity of Methanotrophic Bacteria at Methane Seeps in Eastern Lake Constance Sediments

(2011) Jörg S. Deutzmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Potential ofpmoAAmplicon Pyrosequencing for Methanotroph Diversity Studies

(2011) Claudia Lüke et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Detection, Isolation, and Characterization of Acidophilic Methanotrophs from Sphagnum Mosses

(2011) Nardy Kip et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Methanotrophic community structure and activity under warming and grazing of alpine meadow on the Tibetan Plateau

(2011) Yong Zheng et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Assimilation of acetate by the putative atmospheric methane oxidizers belonging to the USCα clade

(2011) Jennifer Pratscher et al.   ENVIRONMENTAL MICROBIOLOGY

DNA-, rRNA- and mRNA-based stable isotope probing of aerobic methanotrophs in lake sediment

(2011) Marc G. Dumont et al.   ENVIRONMENTAL MICROBIOLOGY

Diversity and function in microbial mats from the Lucky Strike hydrothermal vent field

(2011) Valentin Crépeau et al.   FEMS MICROBIOLOGY ECOLOGY

Identification of microbial communities involved in the methane cycle of a freshwater meromictic lake

(2011) Corinne Biderre-Petit et al.   FEMS MICROBIOLOGY ECOLOGY

Organic acids and ethanol inhibit the oxidation of methane by mire methanotrophs

(2011) Adam S. Wieczorek et al.   FEMS MICROBIOLOGY ECOLOGY

Structure and function of methanotrophic communities in a landfill-cover soil

(2011) Ruth Henneberger et al.   FEMS MICROBIOLOGY ECOLOGY

Facultative methanotrophy: false leads, true results, and suggestions for future research

(2011) Jeremy D. Semrau et al.   FEMS MICROBIOLOGY LETTERS

Methylomonas koyamae sp. nov., a type I methane-oxidizing bacterium from floodwater of a rice paddy field

(2011) T. Ogiso et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Response of methanotrophic communities to afforestation and reforestation in New Zealand

(2011) Loïc Nazaries et al.   ISME Journal

Linking activity, composition and seasonal dynamics of atmospheric methane oxidizers in a meadow soil

(2011) Pravin Malla Shrestha et al.   ISME Journal

Expression patterns of mRNAs for methanotrophy and thiotrophy in symbionts of the hydrothermal vent mussel Bathymodiolus puteoserpentis

(2011) Annelie Wendeberg et al.   ISME Journal

Hydrocarbon monooxygenase in Mycobacterium: recombinant expression of a member of the ammonia monooxygenase superfamily

(2011) Nicholas V Coleman et al.   ISME Journal

Genome Sequence of the Arctic Methanotroph Methylobacter tundripaludum SV96

(2011) Mette M. Svenning et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of the Haloalkaliphilic Methanotrophic Bacterium Methylomicrobium alcaliphilum 20Z

(2011) S. Vuilleumier et al.   JOURNAL OF BACTERIOLOGY

Analysis of methanotroph community composition using a pmoA-based microbial diagnostic microarray

(2011) Nancy Stralis-Pavese et al.   Nature Protocols

Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

Methanotrophic bacteria associated to rice roots: the cultivar effect assessed by T-RFLP and microarray analysis

(2011) Claudia Lüke et al.   Environmental Microbiology Reports

The membrane-associated monooxygenase in the butane-oxidizing Gram-positive bacteriumNocardioidessp. strain CF8 is a novel member of the AMO/PMO family

(2011) Luis A. Sayavedra-Soto et al.   Environmental Microbiology Reports

Structural and functional response of methane-consuming microbial communities to different flooding regimes in riparian soils

(2011) Paul L.E. Bodelier et al.   Ecology and Evolution

Identification of Novel Methane-, Ethane-, and Propane-Oxidizing Bacteria at Marine Hydrocarbon Seeps by Stable Isotope Probing

(2010) M. C. Redmond et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Different Atmospheric Methane-Oxidizing Communities in European Beech and Norway Spruce Soils

(2010) D. M. Degelmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Methanotrophs: Multifunctional bacteria with promising applications in environmental bioengineering

(2010) Hao Jiang et al.   BIOCHEMICAL ENGINEERING JOURNAL

Hydrology is reflected in the functioning and community composition of methanotrophs in the littoral wetland of a boreal lake

(2010) Henri M.P. Siljanen et al.   FEMS MICROBIOLOGY ECOLOGY

Methylogaea oryzae gen. nov., sp. nov., a mesophilic methanotroph isolated from a rice paddy field

(2010) E. Geymonat et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methylovulum miyakonense gen. nov., sp. nov., a type I methanotroph isolated from forest soil

(2010) H. Iguchi et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methylocapsa aurea sp. nov., a facultative methanotroph possessing a particulate methane monooxygenase, and emended description of the genus Methylocapsa

(2010) P. F. Dunfield et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methylothermus subterraneus sp. nov., a moderately thermophilic methanotroph isolated from a terrestrial subsurface hot aquifer

(2010) H. Hirayama et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Methyloferula stellata gen. nov., sp. nov., an acidophilic, obligately methanotrophic bacterium that possesses only a soluble methane monooxygenase

(2010) A. V. Vorobev et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Distributions of putative aerobic methanotrophs in diverse pelagic marine environments

(2010) Patricia L Tavormina et al.   ISME Journal

Environmental distribution and abundance of the facultative methanotroph Methylocella

(2010) Md Tanvir Rahman et al.   ISME Journal

Genome Sequence of the Obligate Methanotroph Methylosinus trichosporium Strain OB3b

(2010) L. Y. Stein et al.   JOURNAL OF BACTERIOLOGY

Complete Genome Sequence of the Aerobic Facultative Methanotroph Methylocella silvestris BL2

(2010) Y. Chen et al.   JOURNAL OF BACTERIOLOGY

Molecular analysis of high-affinity methane-oxidizing enrichment cultures isolated from a forest biocenosis and agrocenoses

(2010) I. K. Kravchenko et al.   MICROBIOLOGY

Nitrite-driven anaerobic methane oxidation by oxygenic bacteria

(2010) Katharina F. Ettwig et al.   NATURE

Constitutive expression of pMMO by Methylocystis strain SB2 when grown on multi-carbon substrates: implications for biodegradation of chlorinated ethenes

(2010) Sukhwan Yoon et al.   Environmental Microbiology Reports

Characterization of a novel facultative Methylocystis species capable of growth on methane, acetate and ethanol

(2010) Jeongdae Im et al.   Environmental Microbiology Reports

A novel family of functional operons encoding methane/ammonia monooxygenase-related proteins in gammaproteobacterial methanotrophs

(2010) Patricia L. Tavormina et al.   Environmental Microbiology Reports

Acetate utilization as a survival strategy of peat-inhabiting Methylocystis spp.

(2010) Svetlana E. Belova et al.   Environmental Microbiology Reports

Methanotrophic Communities in Brazilian Ferralsols from Naturally Forested, Afforested, and Agricultural Sites

(2009) N. Dorr et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biogeography of wetland rice methanotrophs

(2009) Claudia Lüke et al.   ENVIRONMENTAL MICROBIOLOGY

In situmeasurement of methane fluxes and analysis of transcribed particulate methane monooxygenase in desert soils

(2009) Roey Angel et al.   ENVIRONMENTAL MICROBIOLOGY

Biphasic kinetics of  a methanotrophic community is a combination of growth and increased activity per cell

(2009) Anne K. Steenbergh et al.   FEMS MICROBIOLOGY ECOLOGY

A reanalysis of phospholipid fatty acids as ecological biomarkers for methanotrophic bacteria

(2009) Paul L E Bodelier et al.   ISME Journal

Spatial and temporal diversity of methanotrophs in a landfill cover soil are differentially related to soil abiotic factors

(2009) Deepak Kumaresan et al.   Environmental Microbiology Reports

Environmental, genomic and taxonomic perspectives on methanotrophicVerrucomicrobia

(2009) Huub J. M. Op den Camp et al.   Environmental Microbiology Reports

The global methane cycle: recent advances in understanding the microbial processes involved

(2009) Ralf Conrad   Environmental Microbiology Reports

The quest for atmospheric methane oxidizers in forest soils

(2009) Steffen Kolb   Environmental Microbiology Reports

Methanotrophic symbioses in marine invertebrates

(2009) Jillian M. Petersen et al.   Environmental Microbiology Reports

Grazing affects methanotroph activity and diversity in an alpine meadow soil

(2009) Guy C. J. Abell et al.   Environmental Microbiology Reports

Planktonic and Sediment-Associated Aerobic Methanotrophs in Two Seep Systems along the North American Margin

(2008) P. L. Tavormina et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia

(2008) Shaobin Hou et al.   Biology Direct

Diversity of the active methanotrophic community in acidic peatlands as assessed by mRNA and SIP-PLFA analyses

(2008) Yin Chen et al.   ENVIRONMENTAL MICROBIOLOGY

Classification of halo(alkali)philic and halo(alkali)tolerant methanotrophs provisionally assigned to the genera Methylomicrobium and Methylobacter and emended description of the genus Methylomicrobium

(2008) M. G. Kalyuzhnaya et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Applying stable isotope probing of phospholipid fatty acids and rRNA in a Chinese rice field to study activity and composition of the methanotrophic bacterial communities in situ

(2008) Qiongfen Qiu et al.   ISME Journal

New insigths on the metabolic diversity among the epibiotic microbial communitiy of the hydrothermal shrimp Rimicaris exoculata

(2008) Magali Zbinden et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Assessment of microbial methane oxidation above a petroleum-contaminated aquifer using a combination of in situ techniques

(2008) Karina Urmann et al.   JOURNAL OF GEOPHYSICAL RESEARCH

First isolation of a type II methanotroph from a soda lake

(2008) B. Ts. Eshinimaev et al.   MICROBIOLOGY

Two isozymes of particulate methane monooxygenase with different methane oxidation kinetics are found in Methylocystis sp. strain SC2

(2008) M. Baani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Methane oxidation at 55 C and pH 2 by a thermoacidophilic bacterium belonging to the Verrucomicrobia phylum

(2008) T. Islam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA