Nitrosopumilus zosterae sp. nov., an autotrophic ammonia-oxidizing archaeon of phylum Thaumarchaeota isolated from coastal eelgrass sediments of Japan

Molecular Evolutionary Genetics Analysis (MEGA) for macOS

(2020) Glen Stecher et al.   MOLECULAR BIOLOGY AND EVOLUTION

Alternative strategies of nutrient acquisition and energy conservation map to the biogeography of marine ammonia-oxidizing archaea

(2020) Wei Qin et al.   ISME Journal

Nitrosopumilus adriaticus sp. nov. and Nitrosopumilus piranensis sp. nov., two ammonia-oxidizing archaea from the Adriatic Sea and members of the class Nitrososphaeria

(2019) Barbara Bayer et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy

(2019) Jan P. Meier-Kolthoff et al.   Nature Communications

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Nitrosopumilus maritimus gen. nov., sp. nov., Nitrosopumilus cobalaminigenes sp. nov., Nitrosopumilus oxyclinae sp. nov., and Nitrosopumilus ureiphilus sp. nov., four marine ammonia-oxidizing archaea of the phylum Thaumarchaeota

(2017) Wei Qin et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Relative impacts of light, temperature, and reactive oxygen on thaumarchaeal ammonia oxidation in the North Pacific Ocean

(2017) Rachel E. A. Horak et al.   LIMNOLOGY AND OCEANOGRAPHY

Influence of oxygen availability on the activities of ammonia-oxidizing archaea

(2017) Wei Qin et al.   Environmental Microbiology Reports

Hydrogen peroxide detoxification is a key mechanism for growth of ammonia-oxidizing archaea

(2016) Jong-Geol Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Physiological and genomic characterization of two novel marine thaumarchaeal strains indicates niche differentiation

(2015) Barbara Bayer et al.   ISME Journal

Factors influencing nitrification rates and the abundance and transcriptional activity of ammonia-oxidizing microorganisms in the dark northeast Pacific Ocean

(2015) Jason M. Smith et al.   LIMNOLOGY AND OCEANOGRAPHY

Nitrosomonas stercoris sp. nov., a Chemoautotrophic Ammonia-Oxidizing Bacterium Tolerant of High Ammonium Isolated from Composted Cattle Manure

(2015) Tatsunori Nakagawa et al.   MICROBES AND ENVIRONMENTS

amoAGene Abundances and Nitrification Potential Rates Suggest that Benthic Ammonia-Oxidizing Bacteria and Not Archaea Dominate N Cycling in the Colne Estuary, United Kingdom

(2014) Jialin Li et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterisation of terrestrial acidophilic archaeal ammonia oxidisers and their inhibition and stimulation by organic compounds

(2014) Laura E. Lehtovirta-Morley et al.   FEMS MICROBIOLOGY ECOLOGY

Nitrososphaera viennensis gen. nov., sp. nov., an aerobic and mesophilic, ammonia-oxidizing archaeon from soil and a member of the archaeal phylum Thaumarchaeota

(2014) M. Stieglmeier et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Aerobic nitrous oxide production through N-nitrosating hybrid formation in ammonia-oxidizing archaea

(2014) Michaela Stieglmeier et al.   ISME Journal

Ammonia-oxidizing archaea use the most energy-efficient aerobic pathway for CO2 fixation

(2014) M. Konneke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Marine ammonia-oxidizing archaeal isolates display obligate mixotrophy and wide ecotypic variation

(2014) W. Qin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Community Dynamics and Activity of Ammonia-Oxidizing Prokaryotes in Intertidal Sediments of the Yangtze Estuary

(2013) Yanling Zheng et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Transcriptional Response of the Archaeal Ammonia Oxidizer Nitrosopumilus maritimus to Low and Environmentally Relevant Ammonia Concentrations

(2013) Tatsunori Nakagawa et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Abundance and distribution of archaeal acetyl-CoA/propionyl-CoA carboxylase genes indicative for putatively chemoautotrophic Archaea in the tropical Atlantic's interior

(2013) Kristin Bergauer et al.   FEMS MICROBIOLOGY ECOLOGY

Enrichment and Genome Sequence of the Group I.1a Ammonia-Oxidizing Archaeon “Ca. Nitrosotenuis uzonensis” Representing a Clade Globally Distributed in Thermal Habitats

(2013) Elena V. Lebedeva et al.   PLoS One

Physiology and Diversity of Ammonia-Oxidizing Archaea

(2012) David A. Stahl et al.   Annual Review of Microbiology

Ecophysiology of an Ammonia-Oxidizing Archaeon Adapted to Low-Salinity Habitats

(2012) Annika C. Mosier et al.   MICROBIAL ECOLOGY

Enrichment and Characterization of an Autotrophic Ammonia-Oxidizing Archaeon of Mesophilic Crenarchaeal Group I.1a from an Agricultural Soil

(2011) Man-Young Jung et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifying acid soil

(2011) L. E. Lehtovirta-Morley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil

(2011) M. Tourna et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Isotopic Signature of N2O Produced by Marine Ammonia-Oxidizing Archaea

(2011) A. E. Santoro et al.   SCIENCE

Spatial Variability in Nitrification Rates and Ammonia-Oxidizing Microbial Communities in the Agriculturally Impacted Elkhorn Slough Estuary, California

(2010) Scott D. Wankel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Estuarine nitrifiers: New players, patterns and processes

(2010) Anne E. Bernhard et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Histidine is a source of the antioxidant, α-ketoglutarate, in Pseudomonas fluorescens challenged by oxidative stress

(2010) Joseph Lemire et al.   FEMS MICROBIOLOGY LETTERS

Enrichment of a Novel Marine Ammonia-Oxidizing Archaeon Obtained from Sand of an Eelgrass Zone

(2010) Naoki Matsutani et al.   MICROBES AND ENVIRONMENTS

Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea

(2010) C. B. Walker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Abundance of Ammonia-Oxidizing Archaea and Bacteria along an Estuarine Salinity Gradient in Relation to Potential Nitrification Rates

(2009) A. E. Bernhard et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Temporal variability in the abundance of ammonia- oxidizing bacteria vs. archaea in sandy sediments of the Douro River estuary, Portugal

(2009) CM Magalhães et al.   AQUATIC MICROBIAL ECOLOGY

Notes on the characterization of prokaryote strains for taxonomic purposes

(2009) B. J. Tindall et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Seasonal Changes in Abundance of Ammonia-Oxidizing Archaea and Ammonia-Oxidizing Bacteria and Their Nitrification in Sand of an Eelgrass Zone

(2009) Yoshifumi Ando et al.   MICROBES AND ENVIRONMENTS

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

(2009) Willm Martens-Habbena et al.   NATURE

The radiocarbon signature of microorganisms in the mesopelagic ocean

(2009) R. L. Hansman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Relative abundance and diversity of ammonia-oxidizing archaea and bacteria in the San Francisco Bay estuary

(2008) Annika C. Mosier et al.   ENVIRONMENTAL MICROBIOLOGY

Shifts in the relative abundance of ammonia-oxidizing bacteria and archaea across physicochemical gradients in a subterranean estuary

(2008) Alyson E. Santoro et al.   ENVIRONMENTAL MICROBIOLOGY

Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic

(2008) Hélène Agogué et al.   NATURE