Environment and host-related factors modulate gut and carapace bacterial diversity of the invasive red swamp crayfish (Procambarus clarkii)

Gut microbiota of red swamp crayfish Procambarus clarkii in integrated crayfish-rice cultivation model

(2020) Yan Shui et al.   AMB Express

The gut microbiota of invasive bullfrog tadpoles responds more rapidly to temperature than a non‐invasive congener

(2020) Samantha S. Fontaine et al.   MOLECULAR ECOLOGY

Metabarcoding reveals distinct microbiotypes in the giant clam Tridacna maxima

(2020) Isis Guibert et al.   Microbiome

Keystone taxa of water microbiome respond to environmental quality and predict water contamination

(2020) Binhao Wang et al.   ENVIRONMENTAL RESEARCH

The effects of environment and ontogeny on the skin microbiome of two Stegastes damselfishes (Pomacentridae) from the eastern Caribbean Sea

(2020) Raquel Xavier et al.   MARINE BIOLOGY

Microbiome Shifts Associated With the Introduction of Wild Atlantic Horseshoe Crabs (Limulus polyphemus) Into a Touch-Tank Exhibit

(2020) Ariel D. Friel et al.   Frontiers in Microbiology

Rice-shrimp culture: a better intestinal microbiota, immune enzymatic activities, and muscle relish of crayfish (Procambarus clarkii) in Sichuan Province

(2020) Qiao Liu et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Developmental, Dietary, and Geographical Impacts on Gut Microbiota of Red Swamp Crayfish (Procambarus clarkii)

(2020) Zhenting Zhang et al.   Microorganisms

The invasive red swamp crayfish (Procambarus clarkii) increases infection of the amphibian chytrid fungus (Batrachochytrium dendrobatidis)

(2019) Francisco J. Oficialdegui et al.   BIOLOGICAL INVASIONS

Symbiotic microbiota may reflect host adaptation by resident to invasive ant species

(2019) Daifeng Cheng et al.   PLoS Pathogens

Effects of long-term starvation on health indices, gut microbiota and innate immune response of fresh water crayfish, marron (Cherax cainii, Austin 2002)

(2019) Md Javed Foysal et al.   AQUACULTURE

Effects of cadmium on intestinal histology and microbiota in freshwater crayfish (Procambarus clarkii)

(2019) Yu Zhang et al.   CHEMOSPHERE

The effect of nitrite and sulfide on the antioxidant capacity and microbial composition of the intestines of red swamp crayfish, Procambarus clarkii

(2019) Kun Guo et al.   FISH & SHELLFISH IMMUNOLOGY

Environmental selection shapes the formation of near-surface groundwater microbiomes

(2019) Lijuan Yan et al.   WATER RESEARCH

Effects of disease, antibiotic treatment and recovery trajectory on the microbiome of farmed seabass (Dicentrarchus labrax)

(2019) Daniela Rosado et al.   Scientific Reports

Intestinal bacterial signatures of white feces syndrome in shrimp

(2018) Dongwei Hou et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Multiple colonist pools shape fiddler crab-associated bacterial communities

(2018) Catalina Cuellar-Gempeler et al.   ISME Journal

Trichosporon jirovecii infection of red swamp crayfish (Procambarus clarkii )

(2018) Ebtsam Sayed Hassan Abdallah et al.   JOURNAL OF FISH DISEASES

Fish diversification at the pace of geomorphological changes: evolutionary history of western Iberian Leuciscinae (Teleostei: Leuciscidae) inferred from multilocus sequence data

(2018) C. Sousa-Santos et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Microbiomes and chemical components of feed water and membrane-attached biofilm in reverse osmosis system to treat membrane bioreactor effluents

(2018) Tomohiro Inaba et al.   Scientific Reports

Combined impacts of climate and socio-economic scenarios on irrigation water availability for a dry Mediterranean reservoir

(2017) João Pedro Nunes et al.   SCIENCE OF THE TOTAL ENVIRONMENT

The red swamp crayfish Procambarus clarkii in Europe: Impacts on aquatic ecosystems and human well-being

(2016) Catherine Souty-Grosset et al.   LIMNOLOGICA

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Multi-scale ecological filters shape the crayfish microbiome

(2016) James Skelton et al.   SYMBIOSIS

Microbial diversity drives multifunctionality in terrestrial ecosystems

(2016) Manuel Delgado-Baquerizo et al.   Nature Communications

Combined effects of UV irradiation, ozonation, and the probiotic Bacillus spp. on growth, survival, and general fitness in European lobster (Homarus gammarus)

(2015) Karen L. Middlemiss et al.   AQUACULTURE

Effect of vegetable based diets on growth, intestinal morphology, activity of intestinal enzymes and haematological stress indicators in meagre (Argyrosomus regius)

(2015) Laura Ribeiro et al.   AQUACULTURE

Microbial diversity—exploration of natural ecosystems and microbiomes

(2015) Sean M Gibbons et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

A single ectomycorrhizal fungal species can enable aPinusinvasion

(2015) Jeremy Hayward et al.   ECOLOGY

Pathogens as Biological Weapons of Invasive Species

(2015) Andreas Vilcinskas   PLoS Pathogens

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Fiddler crabs (Uca thayeri, Brachyura: Ocypodidae) affect bacterial assemblages in mangrove forest sediments

(2013) C. Cuellar-Gempeler et al.   COMMUNITY ECOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Prevalence of the Crayfish Plague Pathogen Aphanomyces astaci in Populations of the Signal Crayfish Pacifastacus leniusculus in France: Evaluating the Threat to Native Crayfish

(2013) Lenka Filipová et al.   PLoS One

Animals in a bacterial world, a new imperative for the life sciences

(2013) Margaret McFall-Ngai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Measuring Community Similarity with Phylogenetic Networks

(2012) Donovan H. Parks et al.   MOLECULAR BIOLOGY AND EVOLUTION

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Impact of the Resident Microbiota on the Nutritional Phenotype of Drosophila melanogaster

(2012) Emma V. Ridley et al.   PLoS One

Introducing the montado, the cork and holm oak agroforestry system of Southern Portugal

(2011) T. Pinto-Correia et al.   AGROFORESTRY SYSTEMS

Regulation of Flagellum Number by FliA and FlgM and Role in Biofilm Formation by Rhodobacter sphaeroides

(2011) D. A. Wilkinson et al.   JOURNAL OF BACTERIOLOGY

Detection of potentially pathogenic bacteria in the drinking water distribution system of a hospital in Hungary

(2009) T. Felfö ldi et al.   CLINICAL MICROBIOLOGY AND INFECTION

Transferability of environmental favourability models in geographic space: The case of the Iberian desman (Galemys pyrenaicus) in Portugal and Spain

(2009) A. Márcia Barbosa et al.   ECOLOGICAL MODELLING

Gut bacterial communities in the Mediterranean fruit fly (Ceratitis capitata) and their impact on host longevity

(2008) A. Behar et al.   JOURNAL OF INSECT PHYSIOLOGY