Soil fungal community affected by regional climate played an important role in the decomposition of organic compost

Contrasting patterns and drivers of soil bacterial and fungal diversity across a mountain gradient

(2020) Congcong Shen et al.   ENVIRONMENTAL MICROBIOLOGY

Fungal communities and their association with nitrogen-fixing bacteria affect early decomposition of Norway spruce deadwood

(2020) María Gómez-Brandón et al.   Scientific Reports

Patterns and driving factors of litter decomposition across Chinese terrestrial ecosystems

(2020) Andong Cai et al.   JOURNAL OF CLEANER PRODUCTION

Manure acts as a better fertilizer for increasing crop yields than synthetic fertilizer does by improving soil fertility

(2019) Andong Cai et al.   SOIL & TILLAGE RESEARCH

Soil multifunctionality is affected by the soil environment and by microbial community composition and diversity

(2019) Qing Zheng et al.   SOIL BIOLOGY & BIOCHEMISTRY

Partial replacement of inorganic phosphorus (P) by organic manure reshapes phosphate mobilizing bacterial community and promotes P bioavailability in a paddy soil

(2019) Qing-Fang Bi et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Unrevealing variation of microbial communities and correlation with environmental variables in a full culture-cycle of Undaria pinnatifida

(2018) Zelong Zhao et al.   MARINE ENVIRONMENTAL RESEARCH

Long-term straw decomposition in agro-ecosystems described by a unified three-exponentiation equation with thermal time

(2018) Andong Cai et al.   SCIENCE OF THE TOTAL ENVIRONMENT

China’s livestock transition: Driving forces, impacts, and consequences

(2018) Zhaohai Bai et al.   Science Advances

Spatial scaling of forest soil microbial communities across a temperature gradient

(2018) Ye Deng et al.   ENVIRONMENTAL MICROBIOLOGY

The soil organic matter decomposition mechanisms in ectomycorrhizal fungi are tuned for liberating soil organic nitrogen

(2018) César Nicolás et al.   ISME Journal

The effects of dairy cattle manure and mineral N fertilizer on irrigated maize and soil N and organic C

(2017) E. Martínez et al.   EUROPEAN JOURNAL OF AGRONOMY

Continuous application of different organic additives can suppress tomato disease by inducing the healthy rhizospheric microbiota through alterations to the bulk soil microflora

(2017) Hongjun Liu et al.   PLANT AND SOIL

Inducing the rhizosphere microbiome by biofertilizer application to suppress banana Fusarium wilt disease

(2017) Lin Fu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Arbuscular mycorrhiza enhance the rate of litter decomposition while inhibiting soil microbial community development

(2017) Heng Gui et al.   Scientific Reports

Tree species, spatial heterogeneity, and seasonality drive soil fungal abundance, richness, and composition in Neotropical rainforests

(2016) Stephanie N. Kivlin et al.   ENVIRONMENTAL MICROBIOLOGY

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

Temperature mediates continental-scale diversity of microbes in forest soils

(2016) Jizhong Zhou et al.   Nature Communications

Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?

(2016) Emily B. Graham et al.   Frontiers in Microbiology

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Networks Depicting the Fine-Scale Co-Occurrences of Fungi in Soil Horizons

(2016) Hirokazu Toju et al.   PLoS One

Error filtering, pair assembly and error correction for next-generation sequencing reads

(2015) Robert C. Edgar et al.   BIOINFORMATICS

Understanding the dominant controls on litter decomposition

(2015) Mark A. Bradford et al.   JOURNAL OF ECOLOGY

Long-term addition of compost and NP fertilizer increases crop yield and improves soil quality in experiments on smallholder farms

(2014) Workneh Bedada et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Ectomycorrhizal fungi - potential organic matter decomposers, yet not saprotrophs

(2014) Björn D. Lindahl et al.   NEW PHYTOLOGIST

Arbuscular mycorrhiza and nitrogen: implications for individual plants through to ecosystems

(2014) Angela Hodge et al.   PLANT AND SOIL

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Climate fails to predict wood decomposition at regional scales

(2014) Mark A. Bradford et al.   Nature Climate Change

Climate and litter quality differently modulate the effects of soil fauna on litter decomposition across biomes

(2013) Pablo García-Palacios et al.   ECOLOGY LETTERS

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Multiple factors influence the role of arbuscular mycorrhizal fungi in soil aggregation—a meta-analysis

(2013) Eva F. Leifheit et al.   PLANT AND SOIL

Structural Convergence of Maize and Wheat Straw during Two-Year Decomposition under Different Climate Conditions

(2012) Xiaoyue Wang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Interactions between an arbuscular mycorrhizal fungus and a soil microbial community mediating litter decomposition

(2012) Donald J. Herman et al.   FEMS MICROBIOLOGY ECOLOGY

Global biogeography of highly diverse protistan communities in soil

(2012) Scott T Bates et al.   ISME Journal

Fungal community on decomposing leaf litter undergoes rapid successional changes

(2012) Jana Voříšková et al.   ISME Journal

Temporal dynamics of microbial communities on decomposing leaf litter of 10 plant species in relation to decomposition rate

(2012) Sarah R. Bray et al.   SOIL BIOLOGY & BIOCHEMISTRY

Changes in the structural composition and reactivity of Acer rubrum leaf litter tannins exposed to warming and altered precipitation: climatic stress-induced tannins are more reactive

(2011) Nishanth Tharayil et al.   NEW PHYTOLOGIST

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Interspecific variation in leaf litter tannins drives decomposition in a tropical rain forest of French Guiana

(2010) Sylvain Coq et al.   ECOLOGY

Changes in microbial community characteristics and soil organic matter with nitrogen additions in two tropical forests

(2010) Daniela F. Cusack et al.   ECOLOGY

Long-term effect of chemical fertilizer, straw, and manure on soil chemical and biological properties in northwest China

(2010) Enke Liu et al.   GEODERMA

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Leaf litter decomposition—Estimates of global variability based on Yasso07 model

(2009) M. Tuomi et al.   ECOLOGICAL MODELLING

Plant species traits are the predominant control on litter decomposition rates within biomes worldwide

(2008) William K. Cornwell et al.   ECOLOGY LETTERS

Global decomposition experiment shows soil animal impacts on decomposition are climate-dependent

(2008) DIANA H. WALL et al.   GLOBAL CHANGE BIOLOGY

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

Bacterial Community Structure and Diversity in a Black Soil as Affected by Long-Term Fertilization

(2008) Dan WEI et al.   PEDOSPHERE