Genetic variation is associated with differences in facilitative and competitive interactions in the Rhizobium leguminosarum species complex

Niche differentiation is spatially and temporally regulated in the rhizosphere

(2020) Erin E. Nuccio et al.   ISME Journal

Genomic, metabolic and phenotypic variability shapes ecological differentiation and intraspecies interactions of Alteromonas macleodii

(2020) Hanna Koch et al.   Scientific Reports

Understanding the evolution of interspecies interactions in microbial communities

(2020) Florien A. Gorter et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Optimizing Rhizobium-legume symbioses by simultaneous measurement of rhizobial competitiveness and N2 fixation in nodules

(2020) Marcela A. Mendoza-Suárez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolic Heterogeneity and Cross-Feeding in Bacterial Multicellular Systems

(2020) Christopher R. Evans et al.   TRENDS IN MICROBIOLOGY

In vitro Interactions of Pseudomonas aeruginosa With Scedosporium Species Frequently Associated With Cystic Fibrosis

(2019) Mónika Homa et al.   Frontiers in Microbiology

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline

(2019) Kai Blin et al.   NUCLEIC ACIDS RESEARCH

Effects of Agricultural Management on Rhizosphere Microbial Structure and Function in Processing Tomato Plants

(2019) Jennifer E. Schmidt et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Soil indigenous microbiome and plant genotypes cooperatively modify soybean rhizosphere microbiome assembly

(2019) Fang Liu et al.   BMC MICROBIOLOGY

Bacterial siderophores in community and host interactions

(2019) Jos Kramer et al.   NATURE REVIEWS MICROBIOLOGY

Host‐specific competitiveness to form nodules in Rhizobium leguminosarum symbiovar viciae

(2019) Stéphane Boivin et al.   NEW PHYTOLOGIST

Environmental drivers of metabolic heterogeneity in clonal microbial populations

(2019) Frank Schreiber et al.   CURRENT OPINION IN BIOTECHNOLOGY

Discovery of recombinases enables genome mining of cryptic biosynthetic gene clusters in Burkholderiales species

(2018) Xue Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Compatibility between Legumes and Rhizobia for the Establishment of a Successful Nitrogen-Fixing Symbiosis

(2018) et al.   Genes

Combining 16S rRNA gene variable regions enables high-resolution microbial community profiling

(2018) Garold Fuks et al.   Microbiome

Bacterial symbionts use a type VI secretion system to eliminate competitors in their natural host

(2018) Lauren Speare et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolution of bidirectional costly mutualism from byproduct consumption

(2018) William R. Harcombe et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Antagonism correlates with metabolic similarity in diverse bacteria

(2017) Jakob Russel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The epidemicity of facultative microsymbionts in faba bean rhizosphere soils

(2017) Hui Yang Xiong et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microdiversity shapes the traits, niche space, and biogeography of microbial taxa

(2017) Alyse A. Larkin et al.   Environmental Microbiology Reports

Dynamical trade-offs arise from antagonistic coevolution and decrease intraspecific diversity

(2017) Weini Huang et al.   Nature Communications

Trade, Diplomacy, and Warfare: The Quest for Elite Rhizobia Inoculant Strains

(2017) Alice Checcucci et al.   Frontiers in Microbiology

Microbial interactions: ecology in a molecular perspective

(2016) Raíssa Mesquita Braga et al.   BRAZILIAN JOURNAL OF MICROBIOLOGY

Multifaceted Interfaces of Bacterial Competition

(2016) Reed M. Stubbendieck et al.   JOURNAL OF BACTERIOLOGY

Host species and environmental variation can influence rhizobial community composition

(2016) Holly B. Vuong et al.   JOURNAL OF ECOLOGY

Spatial structure, cooperation and competition in biofilms

(2016) Carey D. Nadell et al.   NATURE REVIEWS MICROBIOLOGY

PHASTER: a better, faster version of the PHAST phage search tool

(2016) David Arndt et al.   NUCLEIC ACIDS RESEARCH

The Ecology and Evolution of Microbial Competition

(2016) Melanie Ghoul et al.   TRENDS IN MICROBIOLOGY

A method for high precision sequencing of near full-length 16S rRNA genes on an Illumina MiSeq

(2016) Catherine M. Burke et al.   PeerJ

Diversity patterns of R hizobiaceae communities inhabiting soils, root surfaces and nodules reveal a strong selection of rhizobial partners by legumes

(2015) Fabiola Miranda-Sánchez et al.   ENVIRONMENTAL MICROBIOLOGY

Polylysogeny magnifies competitiveness of a bacterial pathogenin vivo

(2015) Nicola Burns et al.   Evolutionary Applications

Interspecific diversity reduces and functionally substitutes for intraspecific variation in biofilm communities

(2015) Kai Wei Kelvin Lee et al.   ISME Journal

Bacterial genospecies that are not ecologically coherent: population genomics of Rhizobium leguminosarum

(2015) N. Kumar et al.   Open Biology

Estimating Bacterial Diversity for Ecological Studies: Methods, Metrics, and Assumptions

(2015) Julia Birtel et al.   PLoS One

Joint Evolution of Kin Recognition and Cooperation in Spatially Structured Rhizobium Populations

(2014) Peter C. Zee et al.   PLoS One

Phenotype profiling of Rhizobium leguminosarum bv. trifolii clover nodule isolates reveal their both versatile and specialized metabolic capabilities

(2013) Andrzej Mazur et al.   ARCHIVES OF MICROBIOLOGY

Isolation and structural identification of the trihydroxamate siderophore vicibactin and its degradative products from Rhizobium leguminosarum ATCC 14479 bv. trifolii

(2013) William Wright et al.   BIOMETALS

Speedy speciation in a bacterial microcosm: new species can arise as frequently as adaptations within a species

(2013) Alexander F Koeppel et al.   ISME Journal

Synergistic interaction of Rhizobium leguminosarum bv. viciae and arbuscular mycorrhizal fungi as a plant growth promoting biofertilizers for faba bean (Vicia faba L.) in alkaline soil

(2013) Mohamed Hemida Abd-Alla et al.   MICROBIOLOGICAL RESEARCH

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Phenotypic tests in Rhizobium species description: An opinion and (a sympatric speciation) hypothesis

(2013) Ernesto Ormeño-Orrillo et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Engineering Rhizobial Bioinoculants: A Strategy to Improve Iron Nutrition

(2013) S. J. Geetha et al.   TheScientificWorldJOURNAL

Polymicrobial Interactions: Impact on Pathogenesis and Human Disease

(2012) B. M. Peters et al.   CLINICAL MICROBIOLOGY REVIEWS

Competition, Not Cooperation, Dominates Interactions among Culturable Microbial Species

(2012) Kevin R. Foster et al.   CURRENT BIOLOGY

Increasing antagonistic interactions cause bacterial communities to collapse at high diversity

(2012) Joachim Becker et al.   ECOLOGY LETTERS

Bacteriocin Production: a Probiotic Trait?

(2011) Alleson Dobson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genotypic richness and dissimilarity opposingly affect ecosystem functioning

(2011) A. Jousset et al.   ECOLOGY LETTERS

Abundance and diversity of nitrogen-fixing bacteria in rhizosphere and bulk paddy soil under different duration of organic management

(2011) Wang Shu et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Kin Discrimination and Cooperation in Microbes

(2010) Joan E. Strassmann et al.   Annual Review of Microbiology

Genetic and Metabolic Divergence within a Rhizobium leguminosarum bv. trifolii Population Recovered from Clover Nodules

(2010) J. Wielbo et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Competition for nodule occupancy between introduced and native strains of Rhizobium leguminosarum biovar trifolii

(2010) Andrea Rodríguez Blanco et al.   BIOLOGY AND FERTILITY OF SOILS

Modelling antagonic effect of lactic acid eacteria supernatants on some pathogenic bacteria

(2010) Augustus Caeser Franke Portella et al.   BRAZILIAN ARCHIVES OF BIOLOGY AND TECHNOLOGY

Evolutionary divergence and biogeography of sympatric niche-differentiated bacterial populations

(2010) Brian B Oakley et al.   ISME Journal

Persistence of colicinogenic Escherichia coli in the mouse gastrointestinal tract

(2009) Osnat Gillor et al.   BMC MICROBIOLOGY

The cin and rai Quorum-Sensing Regulatory Systems in Rhizobium leguminosarum Are Coordinated by ExpR and CinS, a Small Regulatory Protein Coexpressed with CinI

(2009) A. Edwards et al.   JOURNAL OF BACTERIOLOGY

Enzymatic Tailoring of Ornithine in the Biosynthesis of theRhizobiumCyclic Trihydroxamate Siderophore Vicibactin

(2009) John R. Heemstra et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Bacterial competition: surviving and thriving in the microbial jungle

(2009) Michael E. Hibbing et al.   NATURE REVIEWS MICROBIOLOGY

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

A Common Genomic Framework for a Diverse Assembly of Plasmids in the Symbiotic Nitrogen Fixing Bacteria

(2008) Lisa C. Crossman et al.   PLoS One

Resource Partitioning and Sympatric Differentiation Among Closely Related Bacterioplankton

(2008) D. E. Hunt et al.   SCIENCE

Siderophore cross-utilization amongst nodule isolates of the cowpea miscellany group and its effect on plant growth in the presence of antagonistic organisms

(2006) Falguni R. Joshi et al.   MICROBIOLOGICAL RESEARCH