Human population history at the crossroads of East and Southeast Asia since 11,000 years ago

Genomic insights into the formation of human populations in East Asia

(2021) Chuan-Chao Wang et al.   NATURE

Maternal genetic history of southern East Asians over the past 12,000 years

(2021) Yalin Liu et al.   Journal of Genetics and Genomics

Extensive ethnolinguistic diversity in Vietnam reflects multiple sources of genetic diversity

(2020) Dang Liu et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ancient DNA indicates human population shifts and admixture in northern and southern China

(2020) Melinda A. Yang et al.   SCIENCE

Ancient genomes from northern China suggest links between subsistence changes and human migration

(2020) Chao Ning et al.   Nature Communications

Paleolithic genetic link between Southern China and Mainland Southeast Asia revealed by ancient mitochondrial genomes

(2020) Fan Bai et al.   JOURNAL OF HUMAN GENETICS

THE INTCAL20 NORTHERN HEMISPHERE RADIOCARBON AGE CALIBRATION CURVE (0–55 CAL kBP)

(2020) Paula J Reimer et al.   RADIOCARBON

Mosaic dental morphology in a terminal Pleistocene hominin from Dushan Cave in southern China

(2019) Wei Liao et al.   Scientific Reports

Craniometrics Reveal “Two Layers” of Prehistoric Human Dispersal in Eastern Eurasia

(2019) Hirofumi Matsumura et al.   Scientific Reports

Isolating the human cochlea to generate bone powder for ancient DNA analysis

(2019) Ron Pinhasi et al.   Nature Protocols

The population history of northeastern Siberia since the Pleistocene

(2019) Martin Sikora et al.   NATURE

An Ancient Harappan Genome Lacks Ancestry from Steppe Pastoralists or Iranian Farmers

(2019) Vasant Shinde et al.   CELL

The formation of human populations in South and Central Asia

(2019) Vagheesh M. Narasimhan et al.   SCIENCE

137 ancient human genomes from across the Eurasian steppes

(2018) Peter de Barros Damgaard et al.   NATURE

Estimating genetic kin relationships in prehistoric populations

(2018) Jose Manuel Monroy Kuhn et al.   PLoS One

The first horse herders and the impact of early Bronze Age steppe expansions into Asia

(2018) Peter de Barros Damgaard et al.   SCIENCE

Ancient genomes document multiple waves of migration in Southeast Asian prehistory

(2018) Mark Lipson et al.   SCIENCE

The prehistoric peopling of Southeast Asia

(2018) Hugh McColl et al.   SCIENCE

Terminal Pleistocene Alaskan genome reveals first founding population of Native Americans

(2018) J. Víctor Moreno-Mayar et al.   NATURE

Reconstructing the Deep Population History of Central and South America

(2018) Cosimo Posth et al.   CELL

A high-coverage Neandertal genome from Vindija Cave in Croatia

(2017) Kay Prüfer et al.   SCIENCE

GSA: Genome Sequence Archive *

(2017) Yanqing Wang et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Ancestral Origins and Genetic History of Tibetan Highlanders

(2016) Dongsheng Lu et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Genomic insights into the origin of farming in the ancient Near East

(2016) Iosif Lazaridis et al.   NATURE

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations

(2016) Swapan Mallick et al.   NATURE

Long-term genetic stability and a high-altitude East Asian origin for the peoples of the high valleys of the Himalayan arc

(2016) Choongwon Jeong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The oldest Hoabinhian technocomplex in Asia (43.5 ka) at Xiaodong rockshelter, Yunnan Province, southwest China

(2016) Xueping Ji et al.   QUATERNARY INTERNATIONAL

Massive migration from the steppe was a source for Indo-European languages in Europe

(2015) Wolfgang Haak et al.   NATURE

An early modern human from Romania with a recent Neanderthal ancestor

(2015) Qiaomei Fu et al.   NATURE

Possible Signatures of Hominin Hybridization from the Early Holocene of Southwest China

(2015) Darren Curnoe et al.   Scientific Reports

Optimal Ancient DNA Yields from the Inner Ear Part of the Human Petrous Bone

(2015) Ron Pinhasi et al.   PLoS One

Demographic transitions and migration in prehistoric East/Southeast Asia through the lens of nonmetric dental traits

(2014) Hirofumi Matsumura et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

ANGSD: Analysis of Next Generation Sequencing Data

(2014) Thorfinn Sand Korneliussen et al.   BMC BIOINFORMATICS

Genome sequence of a 45,000-year-old modern human from western Siberia

(2014) Qiaomei Fu et al.   NATURE

leeHom: adaptor trimming and merging for Illumina sequencing reads

(2014) Gabriel Renaud et al.   NUCLEIC ACIDS RESEARCH

Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal

(2014) Pontus Skoglund et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic structure in Europeans dating back at least 36,200 years

(2014) A. Seguin-Orlando et al.   SCIENCE

A Revised Timescale for Human Evolution Based on Ancient Mitochondrial Genomes

(2013) Qiaomei Fu et al.   CURRENT BIOLOGY

Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans

(2013) Maanasa Raghavan et al.   NATURE

The complete genome sequence of a Neanderthal from the Altai Mountains

(2013) Kay Prüfer et al.   NATURE

Single-stranded DNA library preparation for the sequencing of ancient or damaged DNA

(2013) Marie-Theres Gansauge et al.   Nature Protocols

DNA analysis of an early modern human from Tianyuan Cave, China

(2013) Q. Fu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments

(2013) J. Dabney et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ancient Admixture in Human History

(2012) N. Patterson et al.   GENETICS

Human Remains from the Pleistocene-Holocene Transition of Southwest China Suggest a Complex Evolutionary History for East Asians

(2012) Darren Curnoe et al.   PLoS One

Temporal Patterns of Nucleotide Misincorporations and DNA Fragmentation in Ancient DNA

(2012) Susanna Sawyer et al.   PLoS One

A High-Coverage Genome Sequence from an Archaic Denisovan Individual

(2012) M. Meyer et al.   SCIENCE

Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data

(2012) Joseph K. Pickrell et al.   PLoS Genetics

Testing for Ancient Admixture between Closely Related Populations

(2011) Eric Y. Durand et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Draft Sequence of the Neandertal Genome

(2010) R. E. Green et al.   SCIENCE

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Worldwide Human Relationships Inferred from Genome-Wide Patterns of Variation

(2008) J. Z. Li et al.   SCIENCE

What attributes are important for the measurement of assemblage reduction intensity? Results from an experimental stone artefact assemblage with relevance to the Hoabinhian of mainland Southeast Asia

(2007) Ben Marwick   JOURNAL OF ARCHAEOLOGICAL SCIENCE