Estimating genetic kin relationships in prehistoric populations

Ancient X chromosomes reveal contrasting sex bias in Neolithic and Bronze Age Eurasian migrations

(2017) Amy Goldberg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Archaeogenomic evidence reveals prehistoric matrilineal dynasty

(2017) Douglas J. Kennett et al.   Nature Communications

The Identification of a 1916 Irish Rebel: New Approach for Estimating Relatedness From Low Coverage Homozygous Genomes

(2017) Daniel Fernandes et al.   Scientific Reports

Estimating IBD tracts from low coverage NGS data

(2016) Filipe G. Vieira et al.   BIOINFORMATICS

gargammel: a sequence simulator for ancient DNA

(2016) Gabriel Renaud et al.   BIOINFORMATICS

Genes mirror migrations and cultures in prehistoric Europe — a population genomic perspective

(2016) Torsten Günther et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Nuclear DNA sequences from the Middle Pleistocene Sima de los Huesos hominins

(2016) Matthias Meyer et al.   NATURE

The Simons Genome Diversity Project: 300 genomes from 142 diverse populations

(2016) Swapan Mallick et al.   NATURE

Ancient DNA and human history

(2016) Montgomery Slatkin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Diet and Mobility in the Corded Ware of Central Europe

(2016) Karl-Göran Sjögren et al.   PLoS One

A method for positive forensic identification of samples from extremely low-coverage sequence data

(2015) Samuel H. Vohr et al.   BMC GENOMICS

Genome-wide patterns of selection in 230 ancient Eurasians

(2015) Iain Mathieson et al.   NATURE

Massive migration from the steppe was a source for Indo-European languages in Europe

(2015) Wolfgang Haak et al.   NATURE

An early modern human from Romania with a recent Neanderthal ancestor

(2015) Qiaomei Fu et al.   NATURE

Population genomics of Bronze Age Eurasia

(2015) Morten E. Allentoft et al.   NATURE

A global reference for human genetic variation

(2015) Richard A. Gibbs et al.   NATURE

Ancient genomes link early farmers from Atapuerca in Spain to modern-day Basques

(2015) Torsten Günther et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Neolithic and Bronze Age migration to Ireland and establishment of the insular Atlantic genome

(2015) Lara M. Cassidy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Current Status of the Use of Single-Nucleotide Polymorphisms in Forensic Practices

(2014) Kemal Murat Canturk et al.   Genetic Testing and Molecular Biomarkers

Ancient human genomes suggest three ancestral populations for present-day Europeans

(2014) Iosif Lazaridis et al.   NATURE

The genome of a Late Pleistocene human from a Clovis burial site in western Montana

(2014) Morten Rasmussen et al.   NATURE

Identification of kinship and occupant status in Mongolian noble burials of the Yuan Dynasty through a multidisciplinary approach

(2014) Y. Cui et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Accurate and Robust Prediction of Genetic Relationship from Whole-Genome Sequences

(2014) Hong Li et al.   PLoS One

Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal

(2014) Pontus Skoglund et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic Diversity and Admixture Differs for Stone-Age Scandinavian Foragers and Farmers

(2014) P. Skoglund et al.   SCIENCE

Genome flux and stasis in a five millennium transect of European prehistory

(2014) Cristina Gamba et al.   Nature Communications

Relationship Estimation from Whole-Genome Sequence Data

(2014) Hong Li et al.   PLoS Genetics

RelateAdmix: a software tool for estimating relatedness between admixed individuals

(2013) Ida Moltke et al.   BIOINFORMATICS

A Revised Timescale for Human Evolution Based on Ancient Mitochondrial Genomes

(2013) Qiaomei Fu et al.   CURRENT BIOLOGY

Ancient DNA and kinship analysis of human remains deposited in Merovingian necropolis sarcophagi (Jau Dignac et Loirac, France, 7th–8th century AD)

(2013) M.F. Deguilloux et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans

(2013) Maanasa Raghavan et al.   NATURE

The Geography of Recent Genetic Ancestry across Europe

(2013) Peter Ralph et al.   PLOS BIOLOGY

Estimating Kinship in Admixed Populations

(2012) Timothy Thornton et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Detecting and Estimating Contamination of Human DNA Samples in Sequencing and Array-Based Genotype Data

(2012) Goo Jun et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Identity by Descent Between Distant Relatives: Detection and Applications

(2012) Sharon R. Browning et al.   Annual Review of Genetics

Improving ancient DNA read mapping against modern reference genomes

(2012) Mikkel Schubert et al.   BMC GENOMICS

Temporal Patterns of Nucleotide Misincorporations and DNA Fragmentation in Ancient DNA

(2012) Susanna Sawyer et al.   PLoS One

The mystery of missing heritability: Genetic interactions create phantom heritability

(2012) O. Zuk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Origins and Genetic Legacy of Neolithic Farmers and Hunter-Gatherers in Europe

(2012) P. Skoglund et al.   SCIENCE

New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing

(2012) Andreas Keller et al.   Nature Communications

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Identity-by-descent-based phasing and imputation in founder populations using graphical models

(2011) Kimmo Palin et al.   GENETIC EPIDEMIOLOGY

Maximum-likelihood estimation of recent shared ancestry (ERSA)

(2011) C. D. Huff et al.   GENOME RESEARCH

An Aboriginal Australian Genome Reveals Separate Human Dispersals into Asia

(2011) M. Rasmussen et al.   SCIENCE

Robust relationship inference in genome-wide association studies

(2010) Ani Manichaikul et al.   BIOINFORMATICS

Natural Selection and the Distribution of Identity-by-Descent in the Human Genome

(2010) Anders Albrechtsen et al.   GENETICS

Assessment of DNA degradation and the genotyping success of highly degraded samples

(2010) Sheree R. Hughes-Stamm et al.   INTERNATIONAL JOURNAL OF LEGAL MEDICINE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA

(2009) Adrian W. Briggs et al.   NUCLEIC ACIDS RESEARCH

Visualization of Shared Genomic Regions and Meiotic Recombination in High-Density SNP Data

(2009) Elisha D. O. Roberson et al.   PLoS One

A Complete Neandertal Mitochondrial Genome Sequence Determined by High-Throughput Sequencing

(2008) Richard E. Green et al.   CELL

The complete genome of an individual by massively parallel DNA sequencing

(2008) David A. Wheeler et al.   NATURE

Detection of sharing by descent, long-range phasing and haplotype imputation

(2008) Augustine Kong et al.   NATURE GENETICS

Ancient DNA, Strontium isotopes, and osteological analyses shed light on social and kinship organization of the Later Stone Age

(2008) W. Haak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA