GCRFLDA: scoring lncRNA-disease associations using graph convolution matrix completion with conditional random field

Cluster correlation based method for lncRNA-disease association prediction

(2020) Qianqian Yuan et al.   BMC BIOINFORMATICS

Deletion of HNF1A-AS1 Suppresses the Malignant Phenotypes of Breast Cancer Cells In Vitro and In Vivo Through Targeting miRNA-20a-5p/TRIM32 Axis

(2020) Qingjie Meng et al.   CANCER BIOTHERAPY AND RADIOPHARMACEUTICALS

Inferring LncRNA-disease Associations Based On Graph Autoencoder Matrix Completion

(2020) Ximin Wu et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Long Noncoding RNA LINC00261 Reduces Proliferation and Migration of Breast Cancer Cells via the NME1-EMT Pathway

(2020) Guangxiu Guo et al.   Cancer Management and Research

Predicting Human Microbe-Drug Associations via Graph Convolutional Network with Conditional Random Field

(2020) Yahui Long et al.   BIOINFORMATICS

Inferring Disease-Associated Microbes Based on Multi-Data Integration and Network Consistency Projection

(2020) Yongxian Fan et al.   Frontiers in Bioengineering and Biotechnology

LDNFSGB: prediction of long non-coding rna and disease association using network feature similarity and gradient boosting

(2020) Yuan Zhang et al.   BMC BIOINFORMATICS

lncRNA PART1 and MIR17HG as ΔNp63α direct targets regulate tumor progression of cervical squamous cell carcinoma

(2020) Hanyuan Liu et al.   CANCER SCIENCE

MNDR v3.0: mammal ncRNA–disease repository with increased coverage and annotation

(2020) Lin Ning et al.   NUCLEIC ACIDS RESEARCH

Lnc2Cancer 3.0: an updated resource for experimentally supported lncRNA/circRNA cancer associations and web tools based on RNA-seq and scRNA-seq data

(2020) Yue Gao et al.   NUCLEIC ACIDS RESEARCH

Weighted matrix factorization on multi-relational data for LncRNA-disease association prediction

(2019) Yuehui Wang et al.   METHODS

LDAPred: A Method Based on Information Flow Propagation and a Convolutional Neural Network for the Prediction of Disease-Associated lncRNAs

(2019) Ping Xuan et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

A novel algorithm based on bi-random walks to identify disease-related lncRNAs

(2019) Jialu Hu et al.   BMC BIOINFORMATICS

LncDisAP: a computation model for LncRNA-disease association prediction based on multiple biological datasets

(2019) Yongtian Wang et al.   BMC BIOINFORMATICS

Extracting comprehensive clinical information for breast cancer using deep learning methods

(2019) Xiaohui Zhang et al.   INTERNATIONAL JOURNAL OF MEDICAL INFORMATICS

Prediction of lncRNA–disease associations based on inductive matrix completion

(2018) Chengqian Lu et al.   BIOINFORMATICS

Long non-coding RNA GAS5 promotes proliferation, migration and invasion by regulation of miR-301a in esophageal cancer

(2018) Wei Li et al.   ONCOLOGY RESEARCH

Computational models for lncRNA function prediction and functional similarity calculation

(2018) Xing Chen et al.   Briefings in Functional Genomics

OUP accepted manuscript

(2018)   NUCLEIC ACIDS RESEARCH

Inferring disease-associated long non-coding RNAs using genome-wide tissue expression profiles

(2018) Xiaoyong Pan et al.   BIOINFORMATICS

LncRNA-PCAT-1 promotes non-small cell lung cancer progression by regulating miR-149-5p/LRIG2 axis

(2018) Jie Li et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Link prediction via matrix completion

(2017) Ratha Pech et al.   EPL

Aberrant Methylation-Mediated Silencing of lncRNA MEG3 Functions as a ceRNA in Esophageal Cancer

(2017) Zhiming Dong et al.   MOLECULAR CANCER RESEARCH

Upregulation of long non-coding RNA MALAT-1 confers poor prognosis and influences cell proliferation and apoptosis in acute monocytic leukemia

(2017) Jin-Long Huang et al.   ONCOLOGY REPORTS

Roles, Functions, and Mechanisms of Long Non-coding RNAs in Cancer

(2016) Yiwen Fang et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Prioritizing candidate disease-related long non-coding RNAs by walking on the heterogeneous lncRNA and disease network

(2015) Meng Zhou et al.   Molecular BioSystems

Lnc2Cancer: a manually curated database of experimentally supported lncRNAs associated with various human cancers

(2015) Shangwei Ning et al.   NUCLEIC ACIDS RESEARCH

Predicting lncRNA-disease associations and constructing lncRNA functional similarity network based on the information of miRNA

(2015) Xing Chen   Scientific Reports

KATZLDA: KATZ measure for the lncRNA-disease association prediction

(2015) Xing Chen   Scientific Reports

Constructing lncRNA functional similarity network based on lncRNA-disease associations and disease semantic similarity

(2015) Xing Chen et al.   Scientific Reports

Cancer incidence and mortality worldwide: Sources, methods and major patterns in GLOBOCAN 2012

(2014) Jacques Ferlay et al.   INTERNATIONAL JOURNAL OF CANCER

Novel human lncRNA–disease association inference based on lncRNA expression profiles

(2013) Xing Chen et al.   BIOINFORMATICS

Long Noncoding RNAs: Past, Present, and Future

(2013) J. T. Y. Kung et al.   GENETICS

LabCaS: Labeling calpain substrate cleavage sites from amino acid sequence using conditional random fields

(2013) Yong-Xian Fan et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Lung Cancer: Epidemiology, Etiology, and Prevention

(2011) Charles S. Dela Cruz et al.   CLINICS IN CHEST MEDICINE