LDNFSGB: prediction of long non-coding rna and disease association using network feature similarity and gradient boosting

A random forest based computational model for predicting novel lncRNA-disease associations

(2020) Dengju Yao et al.   BMC BIOINFORMATICS

Cluster correlation based method for lncRNA-disease association prediction

(2020) Qianqian Yuan et al.   BMC BIOINFORMATICS

Computational methods and applications for identifying disease-associated lncRNAs as potential biomarkers and therapeutic targets

(2020) Congcong Yan et al.   Molecular Therapy-Nucleic Acids

The long noncoding RNA XIST regulates cardiac hypertrophy by targeting miR-101

(2019) Lili Xiao et al.   JOURNAL OF CELLULAR PHYSIOLOGY

LncRNA BDNF‐AS suppresses colorectal cancer cell proliferation and migration by epigenetically repressing GSK‐3β expression

(2019) Hui Zhi et al.   CELL BIOCHEMISTRY AND FUNCTION

A novel collaborative filtering model for LncRNA-disease association prediction based on the Naïve Bayesian classifier

(2019) Jingwen Yu et al.   BMC BIOINFORMATICS

LncRNA TUG1 contributes to cardiac hypertrophy via regulating miR-29b-3p

(2019) Xue Zou et al.   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL

Upregulation of the lncRNA MEG3 improves cognitive impairment, alleviates neuronal damage, and inhibits activation of astrocytes in hippocampus tissues in Alzheimer's disease through inactivating the PI3K/Akt signaling pathway

(2019) Jiping Yi et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Positive feedback loop SP1/MIR17HG/miR-130a-3p promotes osteosarcoma proliferation and cisplatin resistance

(2019) Yibin Meng et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Exosomal lncRNA HNF1A-AS1 affects cisplatin resistance in cervical cancer cells through regulating microRNA-34b/TUFT1 axis

(2019) Xiaoqiong Luo et al.   Cancer Cell International

SKF-LDA: Similarity Kernel Fusion for Predicting lncRNA-Disease Association

(2019) Guobo Xie et al.   Molecular Therapy-Nucleic Acids

Prediction of lncRNA–disease associations based on inductive matrix completion

(2018) Chengqian Lu et al.   BIOINFORMATICS

Development of a theranostic prodrug for colon cancer therapy by combining ligand-targeted delivery and enzyme-stimulated activation

(2018) Amit Sharma et al.   BIOMATERIALS

ncRNA-disease association prediction based on sequence information and tripartite network

(2018) Takuya Mori et al.   BMC Systems Biology

A Novel Method for LncRNA-Disease Association Prediction Based on an lncRNA-disease Association Network

(2018) pengyao ping et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Multiple Layers of CDK5R1 Regulation in Alzheimer’s Disease Implicate Long Non-Coding RNAs

(2018) Marco Spreafico et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Up-regulated BCAR4 contributes to proliferation and migration of cervical cancer cells

(2018) Ruanmin Zou et al.   SURGICAL ONCOLOGY-OXFORD

A Novel Probability Model for LncRNA–Disease Association Prediction Based on the Naïve Bayesian Classifier

(2018) Jingwen Yu et al.   Genes

Computational models for lncRNA function prediction and functional similarity calculation

(2018) Xing Chen et al.   Briefings in Functional Genomics

OUP accepted manuscript

(2018)   NUCLEIC ACIDS RESEARCH

Long noncoding RNA Meg3 regulates cardiomyocyte apoptosis in myocardial infarction

(2018) Hongchun Wu et al.   GENE THERAPY

Lnc2Cancer v2.0: updated database of experimentally supported long non-coding RNAs in human cancers

(2018) Yue Gao et al.   NUCLEIC ACIDS RESEARCH

BPLLDA: Predicting lncRNA-Disease Associations Based on Simple Paths With Limited Lengths in a Heterogeneous Network

(2018) Xiaofang Xiao et al.   Frontiers in Genetics

Long non-coding RNAs on the stage of cervical cancer

(2017) Junxue Dong et al.   ONCOLOGY REPORTS

Overexpression of long non-coding RNA H19 is associated with unfavorable prognosis in patients with colorectal cancer and increased proliferation and migration in colon cancer cells

(2017) Shan-Wen Chen et al.   Oncology Letters

Long non-coding RNA in glioma: signaling pathways

(2017) Jia Shi et al.   Oncotarget

Long non-coding RNAs in osteosarcoma

(2017) Ruiling Chen et al.   Oncotarget

Long non-coding RNA TUG1 promotes cervical cancer progression by regulating the miR-138-5p-SIRT1 axis

(2017) Jie Zhu et al.   Oncotarget

Global network random walk for predicting potential human lncRNA-disease associations

(2017) Changlong Gu et al.   Scientific Reports

Increased plasma levels of lncRNA H19 and LIPCAR are associated with increased risk of coronary artery disease in a Chinese population

(2017) Zhen Zhang et al.   Scientific Reports

The lncRNA H19 interacts with miR-140 to modulate glioma growth by targeting iASPP

(2016) Haiting Zhao et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Survival in glioblastoma: a review on the impact of treatment modalities

(2016) P. D. Delgado-López et al.   Clinical & Translational Oncology

Over-expression of the long non-coding RNA HOTTIP inhibits glioma cell growth by BRE

(2016) Li-Min Xu et al.   JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH

Model selection and overfitting

(2016) Jake Lever et al.   NATURE METHODS

Computational Approaches for Functional Prediction and Characterisation of Long Noncoding RNAs

(2016) Bethany Signal et al.   TRENDS IN GENETICS

Long non-coding RNA SPRY4-IT1 pormotes colorectal cancer metastasis by regulate epithelial-mesenchymal transition

(2016) Fei Shen et al.   Oncotarget

ILNCSIM: improved lncRNA functional similarity calculation model

(2016) Yu-An Huang et al.   Oncotarget

Pathophysiology of cardiac hypertrophy and heart failure: signaling pathways and novel therapeutic targets

(2015) Yow Keat Tham et al.   ARCHIVES OF TOXICOLOGY

Serum microRNA-210 as a potential noninvasive biomarker for the diagnosis and prognosis of glioma

(2015) N-s Lai et al.   BRITISH JOURNAL OF CANCER

Long noncoding RNAs in innate immunity

(2015) Yuan Zhang et al.   Cellular & Molecular Immunology

Prioritizing candidate disease-related long non-coding RNAs by walking on the heterogeneous lncRNA and disease network

(2015) Meng Zhou et al.   Molecular BioSystems

A gradient boosting method to improve travel time prediction

(2015) Yanru Zhang et al.   TRANSPORTATION RESEARCH PART C-EMERGING TECHNOLOGIES

Predicting lncRNA-disease associations and constructing lncRNA functional similarity network based on the information of miRNA

(2015) Xing Chen   Scientific Reports

KATZLDA: KATZ measure for the lncRNA-disease association prediction

(2015) Xing Chen   Scientific Reports

Constructing lncRNA functional similarity network based on lncRNA-disease associations and disease semantic similarity

(2015) Xing Chen et al.   Scientific Reports

Inferring novel lncRNA–disease associations based on a random walk model of a lncRNA functional similarity network

(2014) Jie Sun et al.   Molecular BioSystems

LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs

(2014) Lina Ma et al.   NUCLEIC ACIDS RESEARCH

A Network Based Method for Analysis of lncRNA-Disease Associations and Prediction of lncRNAs Implicated in Diseases

(2014) Xiaofei Yang et al.   PLoS One

Novel human lncRNA–disease association inference based on lncRNA expression profiles

(2013) Xing Chen et al.   BIOINFORMATICS

Negative regulation of lncRNA GAS5 by miR-21

(2013) Z Zhang et al.   CELL DEATH AND DIFFERENTIATION

NPInter v2.0: an updated database of ncRNA interactions

(2013) Jiao Yuan et al.   NUCLEIC ACIDS RESEARCH

Correction: Prediction of microRNAs Associated with Human Diseases Based on Weighted k Most Similar Neighbors

(2013) Ping Xuan et al.   PLoS One

LncRNADisease: a database for long-non-coding RNA-associated diseases

(2012) Geng Chen et al.   NUCLEIC ACIDS RESEARCH

Evolution and Complexity of Micro RNA in the Human Brain

(2012) Walter J. Lukiw   Frontiers in Genetics

Non-coding RNAs as regulators of embryogenesis

(2011) Andrea Pauli et al.   NATURE REVIEWS GENETICS

Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis

(2010) Rajnish A. Gupta et al.   NATURE