A novel algorithm based on bi-random walks to identify disease-related lncRNAs

Predicting Parkinson's Disease Genes Based on Node2vec and Autoencoder

(2019) Jiajie Peng et al.   Frontiers in Genetics

MD-SVM: a novel SVM-based algorithm for the motif discovery of transcription factor binding sites

(2019) Jialu Hu et al.   BMC BIOINFORMATICS

Prediction of lncRNA–disease associations based on inductive matrix completion

(2018) Chengqian Lu et al.   BIOINFORMATICS

KF-finder: identification of key factors from host-microbial networks in cervical cancer

(2018) Jialu Hu et al.   BMC Systems Biology

WebNetCoffee: a web-based application to identify functionally conserved proteins from Multiple PPI networks

(2018) Jialu Hu et al.   BMC BIOINFORMATICS

MiteFinderII: a novel tool to identify miniature inverted-repeat transposable elements hidden in eukaryotic genomes

(2018) Jialu Hu et al.   BMC Medical Genomics

Detection of Network Motif Based on a Novel Graph Canonization Algorithm from Transcriptional Regulation Networks

(2017) Jialu Hu et al.   MOLECULES

The Ensembl gene annotation system

(2016) Bronwen L. Aken et al.   Database-The Journal of Biological Databases and Curation

Long Non-Coding RNA MEG3 Inhibits Cell Proliferation and Induces Apoptosis in Prostate Cancer

(2015) Gang Luo et al.   CELLULAR PHYSIOLOGY AND BIOCHEMISTRY

KATZLDA: KATZ measure for the lncRNA-disease association prediction

(2015) Xing Chen   Scientific Reports

LncRNA HOTAIR Enhances the Androgen-Receptor-Mediated Transcriptional Program and Drives Castration-Resistant Prostate Cancer

(2015) Ali Zhang et al.   Cell Reports

lncRNA H19/miR-675 axis represses prostate cancer metastasis by targeting TGFBI

(2014) Miaojun Zhu et al.   FEBS Journal

Inferring novel lncRNA–disease associations based on a random walk model of a lncRNA functional similarity network

(2014) Jie Sun et al.   Molecular BioSystems

The oestrogen receptor alpha-regulated lncRNA NEAT1 is a critical modulator of prostate cancer

(2014) Dimple Chakravarty et al.   Nature Communications

Long non-coding RNA GAS5 regulates apoptosis in prostate cancer cell lines

(2013) M.R. Pickard et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

Novel human lncRNA–disease association inference based on lncRNA expression profiles

(2013) Xing Chen et al.   BIOINFORMATICS

Long Noncoding RNA MALAT-1 is a New Potential Therapeutic Target for Castration Resistant Prostate Cancer

(2013) Shancheng Ren et al.   JOURNAL OF UROLOGY

Landscape of transcription in human cells

(2012) Sarah Djebali et al.   NATURE

A Functional Variant at a Prostate Cancer Predisposition Locus at 8q24 Is Associated with PVT1 Expression

(2011) Kerstin B. Meyer et al.   PLoS Genetics

DisGeNET: a Cytoscape plugin to visualize, integrate, search and analyze gene–disease networks

(2010) Anna Bauer-Mehren et al.   BIOINFORMATICS

Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

(2009) Mitchell Guttman et al.   NATURE