Loci and natural alleles for cadmium-mediated growth responses revealed by a genome wide association study and transcriptome analysis in rice

Identification of key genes and modules in response to Cadmium stress in different rice varieties and stem nodes by weighted gene co-expression network analysis

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Association Study Reveals Genetic Loci Responsible for Arsenic, Cadmium and Lead Accumulation in Rice Grain in Contaminated Farmlands

(2019) Xiuyan Liu et al.   Frontiers in Plant Science

Natural variation in the promoter of OsHMA3 contributes to differential grain cadmium accumulation between Indica and Japonica rice

(2019) Chao-Lei Liu et al.   Journal of Integrative Plant Biology

OsZIP1 functions as a metal efflux transporter limiting excess zinc, copper and cadmium accumulation in rice

(2019) Xue Song Liu et al.   BMC PLANT BIOLOGY

Advances in the Uptake and Transport Mechanisms and QTLs Mapping of Cadmium in Rice

(2019) Jingguang Chen et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

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(2019) Xi Wang et al.   JOURNAL OF TRACE ELEMENTS IN MEDICINE AND BIOLOGY

Variation of a major facilitator superfamily gene contributes to differential cadmium accumulation between rice subspecies

(2019) Huili Yan et al.   Nature Communications

The zinc-regulated protein (ZIP) family genes and glutathione s-transferase (GST) family genes play roles in Cd resistance and accumulation of pak choi (Brassica campestris ssp. chinensis)

(2019) Xue Wu et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Glutathione S-transferases modulate Cu tolerance in Oryza sativa

(2018) Lu Li et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Impact of galactoglucomannan oligosaccharides and Cd stress on maize root growth parameters, morphology, and structure

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Cadmium Phytoremediation: Call Rice CAL1

(2018) Fang-Jie Zhao et al.   Molecular Plant

Alternative splicing of OsLG3b controls grain length and yield in japonica rice

(2018) Jianping Yu et al.   PLANT BIOTECHNOLOGY JOURNAL

New QTLs identified for leaf correlative traits in rice seedlings under cadmium stress

(2018) Jiahui Wang et al.   PLANT GROWTH REGULATION

OsATX1 Interacts with Heavy Metal P1B-type ATPases and Affects Copper Transport and Distribution

(2018) Yuanyuan Zhang et al.   PLANT PHYSIOLOGY

A defensin-like protein drives cadmium efflux and allocation in rice

(2018) Jin-Song Luo et al.   Nature Communications

Loci and natural alleles underlying robust roots and adaptive domestication of upland ecotype rice in aerobic conditions

(2018) Yan Zhao et al.   PLoS Genetics

Genome-wide association study and candidate gene analysis of rice cadmium accumulation in grain in a diverse rice collection

(2018) Junliang Zhao et al.   Rice

Rice transcription factor OsMADS25 modulates root growth and confers salinity tolerance via the ABA–mediated regulatory pathway and ROS scavenging

(2018) Ning Xu et al.   PLoS Genetics

Cadmium phytoremediation potential of turnip compared with three common high Cd-accumulating plants

(2017) Xiong Li et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update

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Phytochelatin Synthase has Contrasting Effects on Cadmium and Arsenic Accumulation in Rice Grains

(2017) Shimpei Uraguchi et al.   PLANT AND CELL PHYSIOLOGY

Phytochelatin synthase OsPCS1 plays a crucial role in reducing arsenic levels in rice grains

(2017) Shimpei Hayashi et al.   PLANT JOURNAL

Identification of alternatively spliced transcripts of rice phytochelatin synthase 2 gene OsPCS2 involved in mitigation of cadmium and arsenic stresses

(2017) Natasha Das et al.   PLANT MOLECULAR BIOLOGY

Genetic control of the root system in rice under normal and drought stress conditions by genome-wide association study

(2017) Xiaokai Li et al.   PLoS Genetics

Genome-wide association study using whole-genome sequencing rapidly identifies new genes influencing agronomic traits in rice

(2016) Kenji Yano et al.   NATURE GENETICS

OsCLT1, a CRT-like transporter 1, is required for glutathione homeostasis and arsenic tolerance in rice

(2016) Jian Yang et al.   NEW PHYTOLOGIST

Study on the Growth and Photosynthetic Characteristics of Wheat Seedlings Under [C4mim][OAc] (1-butyl-3-methyl-imidazolium acetate) with Cd2+ Stress

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Phytoremediation of cadmium by the facultative halophyte plant Bolboschoenus maritimus (L.) Palla, at different salinities

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Association Mapping of Quantitative Trait Loci for Mineral Element Contents in Whole Grain Rice (Oryza sativa L.)

(2015) Yan Huang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Contribution of glutathione to the control of cellular redox homeostasis under toxic metal and metalloid stress

(2015) Luis E. Hernández et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide association mapping of cadmium accumulation in different organs of barley

(2015) Dezhi Wu et al.   NEW PHYTOLOGIST

The auxin transporter, OsAUX1, is involved in primary root and root hair elongation and in Cd stress responses in rice (Oryza sativaL.)

(2015) ChenLiang Yu et al.   PLANT JOURNAL

A rice tonoplastic calcium exchanger, OsCCX2 mediates Ca2+/cation transport in yeast

(2015) Akhilesh K. Yadav et al.   Scientific Reports

Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice

(2014) Akimasa Sasaki et al.   JOURNAL OF EXPERIMENTAL BOTANY

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Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Nramp5 Is a Major Transporter Responsible for Manganese and Cadmium Uptake in Rice

(2012) A. Sasaki et al.   PLANT CELL

Copper Chaperone Antioxidant Protein1 Is Essential for Copper Homeostasis

(2012) L.-J. Shin et al.   PLANT PHYSIOLOGY

Flavonoids as antioxidants in plants: Location and functional significance

(2012) Giovanni Agati et al.   PLANT SCIENCE

Cd2+ binds to Atx1 and affects the physical interaction between Atx1 and Ccc2 in Saccharomyces cerevisiae

(2011) Dong-Hyuk Heo et al.   BIOTECHNOLOGY LETTERS

Evaluating the effective numbers of independent tests and significant p-value thresholds in commercial genotyping arrays and public imputation reference datasets

(2011) Miao-Xin Li et al.   HUMAN GENETICS

Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice

(2011) Hugo Shimo et al.   JOURNAL OF EXPERIMENTAL BOTANY

Mutations in Rice (Oryza sativa) Heavy Metal ATPase 2 (OsHMA2) Restrict the Translocation of Zinc and Cadmium

(2011) Namiko Satoh-Nagasawa et al.   PLANT AND CELL PHYSIOLOGY

Low-affinity cation transporter (OsLCT1) regulates cadmium transport into rice grains

(2011) S. Uraguchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Variance component model to account for sample structure in genome-wide association studies

(2010) Hyun Min Kang et al.   NATURE GENETICS

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

OsHMA3, a P1B-type of ATPase affects root-to-shoot cadmium translocation in rice by mediating efflux into vacuoles

(2010) Hidenori Miyadate et al.   NEW PHYTOLOGIST

Gene limiting cadmium accumulation in rice

(2010) D. Ueno et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A core collection and mini core collection of Oryza sativa L. in China

(2010) Hongliang Zhang et al.   THEORETICAL AND APPLIED GENETICS

Applications of chitin- and chitosan-derivatives for the detoxification of water and wastewater — A short review

(2009) Amit Bhatnagar et al.   ADVANCES IN COLLOID AND INTERFACE SCIENCE

A major quantitative trait locus controlling cadmium translocation in rice (Oryza sativa )

(2009) D. Ueno et al.   NEW PHYTOLOGIST

Mapping of QTLs associated with cadmium tolerance and accumulation during seedling stage in rice (Oryza sativa L.)

(2008) Dawei Xue et al.   EUPHYTICA

Arsenic uptake and metabolism in plants

(2008) F. J. Zhao et al.   NEW PHYTOLOGIST