Association Study Reveals Genetic Loci Responsible for Arsenic, Cadmium and Lead Accumulation in Rice Grain in Contaminated Farmlands

Decreasing arsenic accumulation in rice by overexpressing OsNIP1;1 and OsNIP3;3 through disrupting arsenite radial transport in roots

(2018) Sheng-Kai Sun et al.   NEW PHYTOLOGIST

A defensin-like protein drives cadmium efflux and allocation in rice

(2018) Jin-Song Luo et al.   Nature Communications

Genomic variation in 3,010 diverse accessions of Asian cultivated rice

(2018) Wensheng Wang et al.   NATURE

PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format files

(2018) Chi Zhang et al.   BIOINFORMATICS

Genetic basis of rice ionomic variation revealed by Genome-wide association studies

(2018) Meng Yang et al.   PLANT CELL

Knocking Out OsPT4 Gene Decreases Arsenate Uptake by Rice Plants and Inorganic Arsenic Accumulation in Rice Grains

(2017) Yue Cao et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

The Role of Node Restriction on Cadmium Accumulation in the Brown Rice of 12 Chinese Rice (Oryza sativa L.) Cultivars

(2017) Gaoxiang Huang et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

OsHAC4 is critical for arsenate tolerance and regulates arsenic accumulation in rice

(2017) Jiming Xu et al.   NEW PHYTOLOGIST

OsARM1, an R2R3 MYB Transcription Factor, Is Involved in Regulation of the Response to Arsenic Stress in Rice

(2017) Feng-Zhu Wang et al.   Frontiers in Plant Science

OsPT4 Contributes to Arsenate Uptake and Transport in Rice

(2017) Ying Ye et al.   Frontiers in Plant Science

Toxic Heavy Metal and Metalloid Accumulation in Crop Plants and Foods

(2016) Stephan Clemens et al.   Annual Review of Plant Biology

The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice

(2016) Peitong Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide association study using whole-genome sequencing rapidly identifies new genes influencing agronomic traits in rice

(2016) Kenji Yano et al.   NATURE GENETICS

Rice SNP-seek database update: new SNPs, indels, and queries

(2016) Locedie Mansueto et al.   NUCLEIC ACIDS RESEARCH

OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation

(2016) Shulin Shi et al.   PLANT PHYSIOLOGY

Open access resources for genome-wide association mapping in rice

(2016) Susan R. McCouch et al.   Nature Communications

Association Analysis in Rice: From Application to Utilization

(2016) Peng Zhang et al.   Frontiers in Plant Science

Worldwide Genetic Diversity for Mineral Element Concentrations in Rice Grain

(2015) Shannon R. M Pinson et al.   CROP SCIENCE

The role of nodes in arsenic storage and distribution in rice

(2015) Yi Chen et al.   JOURNAL OF EXPERIMENTAL BOTANY

fastSTRUCTURE: Variational Inference of Population Structure in Large SNP Data Sets

(2014) Anil Raj et al.   GENETICS

Overexpression of OsHMA3 enhances Cd tolerance and expression of Zn transporter genes in rice

(2014) Akimasa Sasaki et al.   JOURNAL OF EXPERIMENTAL BOTANY

Advantages and pitfalls in the application of mixed-model association methods

(2014) Jian Yang et al.   NATURE GENETICS

The multidrug and toxic compound extrusion (MATE) family in plants

(2014) Kojiro Takanashi et al.   Plant Biotechnology

Genome Wide Association Mapping of Grain Arsenic, Copper, Molybdenum and Zinc in Rice (Oryza sativa L.) Grown at Four International Field Sites

(2014) Gareth J. Norton et al.   PLoS One

A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain

(2014) W.-Y. Song et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lead in rice: Analysis of baseline lead levels in market and field collected rice grains

(2014) Gareth J. Norton et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Genome-wide Association Mapping Identifies a New Arsenate Reductase Enzyme Critical for Limiting Arsenic Accumulation in Plants

(2014) Dai-Yin Chao et al.   PLOS BIOLOGY

Natural Variations and Genome-Wide Association Studies in Crop Plants

(2013) Xuehui Huang et al.   Annual Review of Plant Biology

Immobilization of trace metals by phosphates in contaminated soil near lead/zinc mine tailings evaluated by sequential extraction and TCLP

(2013) Wei-Hong Wu et al.   JOURNAL OF SOILS AND SEDIMENTS

Spatial transcriptomes of iron-deficient and cadmium-stressed rice

(2013) Yuko Ogo et al.   NEW PHYTOLOGIST

Preferential Delivery of Zinc to Developing Tissues in Rice Is Mediated by P-Type Heavy Metal ATPase OsHMA2

(2013) N. Yamaji et al.   PLANT PHYSIOLOGY

Urinary and Dietary Analysis of 18,470 Bangladeshis Reveal a Correlation of Rice Consumption with Arsenic Exposure and Toxicity

(2013) Stephanie Melkonian et al.   PLoS One

A review of soil heavy metal pollution from mines in China: Pollution and health risk assessment

(2013) Zhiyuan Li et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Genome-wide efficient mixed-model analysis for association studies

(2012) Xiang Zhou et al.   NATURE GENETICS

Comparative transcriptome analysis of transporters, phytohormone and lipid metabolism pathways in response to arsenic stress in rice (Oryza sativa)

(2012) Lu-jun Yu et al.   NEW PHYTOLOGIST

Nramp5 Is a Major Transporter Responsible for Manganese and Cadmium Uptake in Rice

(2012) A. Sasaki et al.   PLANT CELL

The OsHMA2 transporter is involved in root-to-shoot translocation of Zn and Cd in rice

(2012) RYUICHI TAKAHASHI et al.   PLANT CELL AND ENVIRONMENT

Transcriptomic changes and signalling pathways induced by arsenic stress in rice roots

(2012) Tsai-Lien Huang et al.   PLANT MOLECULAR BIOLOGY

Members of rice plasma membrane intrinsic proteins subfamily are involved in arsenite permeability and tolerance in plants

(2012) Kareem A. Mosa et al.   TRANSGENIC RESEARCH

Mutations in Rice (Oryza sativa) Heavy Metal ATPase 2 (OsHMA2) Restrict the Translocation of Zinc and Cadmium

(2011) Namiko Satoh-Nagasawa et al.   PLANT AND CELL PHYSIOLOGY

An Al-inducible MATE gene is involved in external detoxification of Al in rice

(2011) Kengo Yokosho et al.   PLANT JOURNAL

Low-affinity cation transporter (OsLCT1) regulates cadmium transport into rice grains

(2011) S. Uraguchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

GCTA: A Tool for Genome-wide Complex Trait Analysis

(2010) Jian Yang et al.   AMERICAN JOURNAL OF HUMAN GENETICS

OsHMA3, a P1B-type of ATPase affects root-to-shoot cadmium translocation in rice by mediating efflux into vacuoles

(2010) Hidenori Miyadate et al.   NEW PHYTOLOGIST

Genomic Diversity and Introgression in O. sativa Reveal the Impact of Domestication and Breeding on the Rice Genome

(2010) Keyan Zhao et al.   PLoS One

Gene limiting cadmium accumulation in rice

(2010) D. Ueno et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Occurrence and Partitioning of Cadmium, Arsenic and Lead in Mine Impacted Paddy Rice: Hunan, China

(2009) Paul N. Williams et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Geographical Variation in Total and Inorganic Arsenic Content of Polished (White) Rice

(2009) Andrew A. Meharg et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

A review of heavy metal contaminations in urban soils, urban road dusts and agricultural soils from China

(2009) Binggan Wei et al.   MICROCHEMICAL JOURNAL

Two functionally distinct members of the MATE (multi-drug and toxic compound extrusion) family of transporters potentially underlie two major aluminum tolerance QTLs in maize

(2009) Lyza G. Maron et al.   PLANT JOURNAL

A subgroup of plant aquaporins facilitate the bi-directional diffusion of As(OH)3 and Sb(OH)3 across membranes

(2008) Gerd P Bienert et al.   BMC BIOLOGY

High levels of heavy metals in rice (Oryzasativa L.) from a typical E-waste recycling area in southeast China and its potential risk to human health

(2008) Jianjie Fu et al.   CHEMOSPHERE

Effects of field application of phosphate fertilizers on the availability and uptake of lead, zinc and cadmium by cabbage (Brassica chinensis L.) in a mining tailing contaminated soil

(2008) Biling WANG et al.   JOURNAL OF ENVIRONMENTAL SCIENCES

OsFRDL1 Is a Citrate Transporter Required for Efficient Translocation of Iron in Rice

(2008) K. Yokosho et al.   PLANT PHYSIOLOGY

Transporters of arsenite in rice and their role in arsenic accumulation in rice grain

(2008) J. F. Ma et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA