Protein interaction patterns in Arabidopsis thaliana leaf mitochondria change in dependence to light

Matrix Redox Physiology Governs the Regulation of Plant Mitochondrial Metabolism through Posttranslational Protein Modifications

(2020) Ian Max Møller et al.   PLANT CELL

Tissue‐Specific Isolation of Arabidopsis/plant Mitochondria‐ IMTACT (Isolation of Mitochondria TAgged in specific Cell Types)

(2020) Clément Boussardon et al.   PLANT JOURNAL

Rapid Affinity Purification of Tagged Plant Mitochondria (Mito-AP) for Metabolome and Proteome Analyses

(2020) Markus Niehaus et al.   PLANT PHYSIOLOGY

The Oxidative Phosphorylation system of the mitochondria in plants

(2020) Hans-Peter Braun   MITOCHONDRION

Specific features and assembly of the plant mitochondrial complex I revealed by cryo-EM

(2020) Heddy Soufari et al.   Nature Communications

Atomic structure of a mitochondrial complex I intermediate from vascular plants

(2020) Maria Maldonado et al.   eLife

COmplexome Profiling ALignment (COPAL) reveals remodeling of mitochondrial protein complexes in Barth syndrome

(2019) Joeri Van Strien et al.   BIOINFORMATICS

Mitochondrial complex II of plants: subunit composition, assembly and function in respiration and signaling

(2019) Shaobai Huang et al.   PLANT JOURNAL

Complexome profiling reveals association of PPR proteins with ribosomes in the mitochondria of plants

(2019) Nils Rugen et al.   MOLECULAR & CELLULAR PROTEOMICS

Single organelle function and organization as estimated from Arabidopsis mitochondrial proteomics

(2019) Philippe Fuchs et al.   PLANT JOURNAL

Pathogenic Bi-allelic Mutations in NDUFAF8 Cause Leigh Syndrome with an Isolated Complex I Deficiency

(2019) Charlotte L. Alston et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Metabolite Regulatory Interactions Control Plant Respiratory Metabolism via Target of Rapamycin (TOR) Kinase Activation

(2019) Brendan M. O’Leary et al.   PLANT CELL

Rapid Single-Step Affinity Purification of HA-Tagged Plant Mitochondria

(2019) Franziska Kuhnert et al.   PLANT PHYSIOLOGY

Plant organelle RNA editing and its specificity factors: enhancements of analyses and new database features in PREPACT 3.0

(2018) Henning Lenz et al.   BMC BIOINFORMATICS

Proteomic analysis dissects the impact of nodulation and biological nitrogen fixation on Vicia faba root nodule physiology

(2018) Beate Thal et al.   PLANT MOLECULAR BIOLOGY

The PRIDE database and related tools and resources in 2019: improving support for quantification data

(2018) Yasset Perez-Riverol et al.   NUCLEIC ACIDS RESEARCH

The assembly pathway of complex I in Arabidopsis thaliana

(2018) Joanna Ligas et al.   PLANT JOURNAL

The mitochondrial complexome of Arabidopsis thaliana

(2017) Jennifer Senkler et al.   PLANT JOURNAL

Salicylic Acid-Dependent Plant Stress Signaling via Mitochondrial Succinate Dehydrogenase

(2017) Katharina Belt et al.   PLANT PHYSIOLOGY

Protein-protein interactions and metabolite channelling in the plant tricarboxylic acid cycle

(2017) Youjun Zhang et al.   Nature Communications

Feedback Regulation and Time Hierarchy of Oxidative Phosphorylation in Cardiac Mitochondria

(2016) Kalyan C. Vinnakota et al.   BIOPHYSICAL JOURNAL

Post-translational modifications in mitochondria: protein signaling in the powerhouse

(2016) Amanda R. Stram et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

The MaxQuant computational platform for mass spectrometry-based shotgun proteomics

(2016) Stefka Tyanova et al.   Nature Protocols

Mitochondrial gamma carbonic anhydrases are required for complex I assembly and plant reproductive development

(2016) Steffanie Fromm et al.   NEW PHYTOLOGIST

SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations

(2016) Cornelia M. Hooper et al.   NUCLEIC ACIDS RESEARCH

SDH6 and SDH7 Contribute to Anchoring Succinate Dehydrogenase to the Inner Mitochondrial Membrane in Arabidopsis thaliana

(2016) Christine Schikowsky et al.   PLANT PHYSIOLOGY

PreventingN- andO-formylation of proteins when incubated in concentrated formic acid

(2016) Shi Zheng et al.   PROTEOMICS

Determination of the Catalytic Mechanism for Mitochondrial Malate Dehydrogenase

(2015) Santosh K. Dasika et al.   BIOPHYSICAL JOURNAL

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

l-Galactono-1,4-lactone dehydrogenase is an assembly factor of the membrane arm of mitochondrial complex I in Arabidopsis

(2015) Joram Schimmeyer et al.   PLANT MOLECULAR BIOLOGY

Thioredoxin, a master regulator of the tricarboxylic acid cycle in plant mitochondria

(2015) Danilo M. Daloso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Krebs Cycle Metabolon: Structural Evidence of Substrate Channeling Revealed by Cross-Linking and Mass Spectrometry

(2014) Fei Wu et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

NOVA: a software to analyze complexome profiling data

(2014) H. Giese et al.   BIOINFORMATICS

SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome

(2014) Cornelia M. Hooper et al.   BIOINFORMATICS

Post-translational modification of mitochondria as a novel mode of regulation

(2014) Annette Hofer et al.   EXPERIMENTAL GERONTOLOGY

Multiple Curve Comparisons with an Application to the Formation of the Dorsal Funiculus of Mutant Mice

(2014) Esther Herberich et al.  

Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ

(2014) Jürgen Cox et al.   MOLECULAR & CELLULAR PROTEOMICS

Enzyme clustering accelerates processing of intermediates through metabolic channeling

(2014) Michele Castellana et al.   NATURE BIOTECHNOLOGY

The Arabidopsis Class II Sirtuin Is a Lysine Deacetylase and Interacts with Mitochondrial Energy Metabolism

(2014) A.-C. Konig et al.   PLANT PHYSIOLOGY

Regulation of the mitochondrial tricarboxylic acid cycle

(2013) Adriano Nunes-Nesi et al.   CURRENT OPINION IN PLANT BIOLOGY

Redox Regulation of Arabidopsis Mitochondrial Citrate Synthase

(2013) Elisabeth Schmidtmann et al.   Molecular Plant

Comprehensive High-Resolution Analysis of the Role of an Arabidopsis Gene Family in RNA Editing

(2013) Stéphane Bentolila et al.   PLoS Genetics

Nitric oxide inhibits succinate dehydrogenase-driven oxygen consumption in potato tuber mitochondria in an oxygen tension-independent manner

(2012) Vagner Simonin et al.   BIOCHEMICAL JOURNAL

l-Galactono-1,4-lactone dehydrogenase (GLDH) Forms Part of Three Subcomplexes of Mitochondrial Complex I inArabidopsis thaliana

(2012) Peter Schertl et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Mitochondrial Proteome Heterogeneity between Tissues from the Vegetative and Reproductive Stages of Arabidopsis thaliana Development

(2012) Chun Pong Lee et al.   JOURNAL OF PROTEOME RESEARCH

Quantitative Phosphoproteome Profiling of Iron-Deficient Arabidopsis Roots

(2012) P. Lan et al.   PLANT PHYSIOLOGY

Insights into the Composition and Assembly of the Membrane Arm of Plant Complex I through Analysis of Subcomplexes inArabidopsisMutant Lines

(2011) Etienne H. Meyer et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Global quantification of mammalian gene expression control

(2011) Björn Schwanhäusser et al.   NATURE

Defining the Protein Complex Proteome of Plant Mitochondria

(2011) J. Klodmann et al.   PLANT PHYSIOLOGY

The Presequence of Arabidopsis Serine Hydroxymethyltransferase SHM2 Selectively Prevents Import into Mesophyll Mitochondria

(2011) N. Engel et al.   PLANT PHYSIOLOGY

Mitochondrial complex II has a key role in mitochondrial-derived reactive oxygen species influence on plant stress gene regulation and defense

(2011) C. Gleason et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Low-SDS Blue native PAGE

(2011) Jennifer Klodmann et al.   PROTEOMICS

The regulation of OXPHOS by extramitochondrial calcium

(2010) Frank N. Gellerich et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Three Different and Tissue-specific NAD-Malic Enzymes Generated by Alternative Subunit Association in Arabidopsis thaliana

(2010) Marcos A. Tronconi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Diurnal Changes in Mitochondrial Function Reveal Daily Optimization of Light and Dark Respiratory Metabolism inArabidopsis

(2010) Chun Pong Lee et al.   MOLECULAR & CELLULAR PROTEOMICS

Large pore gels to separate mega protein complexes larger than 10 MDa by blue native electrophoresis: Isolation of putative respiratory strings or patches

(2010) Valentina Strecker et al.   PROTEOMICS

Not just a circle: flux modes in the plant TCA cycle

(2010) Lee J. Sweetlove et al.   TRENDS IN PLANT SCIENCE

Large-Scale Arabidopsis Phosphoproteome Profiling Reveals Novel Chloroplast Kinase Substrates and Phosphorylation Networks

(2009) S. Reiland et al.   PLANT PHYSIOLOGY

A survey of theArabidopsis thalianamitochondrial phosphoproteome

(2009) Jun Ito et al.   PROTEOMICS

l-Galactono-1,4-lactone Dehydrogenase Is Required for the Accumulation of Plant Respiratory Complex I

(2008) Bernard Pineau et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Arabidopsis NAD-Malic Enzyme Functions As a Homodimer and Heterodimer and Has a Major Impact on Nocturnal Metabolism

(2008) M. A. Tronconi et al.   PLANT PHYSIOLOGY

Decrease in Manganese Superoxide Dismutase Leads to Reduced Root Growth and Affects Tricarboxylic Acid Cycle Flux and Mitochondrial Redox Homeostasis

(2008) M. J. Morgan et al.   PLANT PHYSIOLOGY

The multiplicity of dehydrogenases in the electron transport chain of plant mitochondria

(2007) Allan G. Rasmusson et al.   MITOCHONDRION