Analysis of the cyanobacterial amino acid metabolism with a precise genome-scale metabolic reconstruction of Anabaena sp. UTEX 2576
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Title
Analysis of the cyanobacterial amino acid metabolism with a precise genome-scale metabolic reconstruction of Anabaena sp. UTEX 2576
Authors
Keywords
Anabaena, Cyanobacteria, Genome-scale metabolic reconstruction, Nitrogen fixation, Secondary metabolites
Journal
BIOCHEMICAL ENGINEERING JOURNAL
Volume 171, Issue -, Pages 108008
Publisher
Elsevier BV
Online
2021-04-07
DOI
10.1016/j.bej.2021.108008
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Note: Only part of the references are listed.- Nitrogen Sources and Iron Availability Affect Pigment Biosynthesis and Nutrient Consumption in Anabaena sp. UTEX 2576
- (2021) Daniel A. Norena-Caro et al. Microorganisms
- Current knowledge and recent advances in understanding metabolism of the model cyanobacterium Synechocystis sp. PCC 6803
- (2020) Lauren A. Mills et al. BIOSCIENCE REPORTS
- Arginine and nitrogen mobilization in cyanobacteria
- (2019) Hao Zhang et al. MOLECULAR MICROBIOLOGY
- Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0
- (2019) Laurent Heirendt et al. Nature Protocols
- Cyanobacterial bioactive metabolites—A review of their chemistry and biology
- (2019) I-Shuo Huang et al. HARMFUL ALGAE
- Cyanobacterial Siderophores—Physiology, Structure, Biosynthesis, and Applications
- (2019) Erland Årstøl et al. Marine Drugs
- 2‐oxoglutarate modulates the affinity of FurA for the ntcA promoter in Anabaena sp. PCC 7120
- (2019) Jorge Guío et al. FEBS LETTERS
- Transcriptome analysis reveals the genetic foundation for the dynamics of starch and lipid production in Ettlia oleoabundans
- (2018) Mark H.J. Sturme et al. Algal Research-Biomass Biofuels and Bioproducts
- Enhancement of photosynthetic isobutanol production in engineered cells of Synechocystis PCC 6803
- (2018) Rui Miao et al. Biotechnology for Biofuels
- Advances in metabolic modeling of oleaginous microalgae
- (2018) Juan D. Tibocha-Bonilla et al. Biotechnology for Biofuels
- Genetic responses to carbon and nitrogen availability in Anabaena
- (2018) Antonia Herrero et al. ENVIRONMENTAL MICROBIOLOGY
- Iron deficiency influences NtcA-dependent regulation of fatty acid desaturation and heterocyte envelop formation in Anabaena sp. PCC 7120
- (2018) Manish S. Kaushik et al. PHYSIOLOGIA PLANTARUM
- UniProt: a worldwide hub of protein knowledge
- (2018) NUCLEIC ACIDS RESEARCH
- Genome-scale fluxome of Synechococcus elongatus UTEX 2973 using transient 13C-labeling data
- (2018) John I. Hendry et al. PLANT PHYSIOLOGY
- Carbon/Nitrogen Metabolic Balance: Lessons from Cyanobacteria
- (2018) Cheng-Cai Zhang et al. TRENDS IN PLANT SCIENCE
- Microalgae as a source of vitamin K1
- (2018) Thomas D.C. Tarento et al. Algal Research-Biomass Biofuels and Bioproducts
- Cyanobacteria as photoautotrophic biofactories of high-value chemicals
- (2018) Daniel Noreña-Caro et al. Journal of CO2 Utilization
- Variation of fatty acid desaturation in response to different nitrate levels in Auxenochlorella pyrenoidosa
- (2018) Qi Zhang et al. Royal Society Open Science
- Isotopically nonstationary 13 C flux analysis of cyanobacterial isobutyraldehyde production
- (2017) Lara J. Jazmin et al. METABOLIC ENGINEERING
- Material properties of the cyanobacterial reserve polymer multi- l -arginyl-poly- l -aspartate (cyanophycin)
- (2017) Nikita A. Khlystov et al. POLYMER
- Heterologous Production of Cyanobacterial Mycosporine-Like Amino Acids Mycosporine-Ornithine and Mycosporine-Lysine in Escherichia coli
- (2016) Meenu Katoch et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Thylakoid membrane function in heterocysts
- (2016) Ann Magnuson et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Metabolic model of Synechococcus sp. PCC 7002: Prediction of flux distribution and network modification for enhanced biofuel production
- (2016) John I. Hendry et al. BIORESOURCE TECHNOLOGY
- Structural Diversification of Lyngbyatoxin A by Host-Dependent Heterologous Expression of thetleABCBiosynthetic Gene Cluster
- (2016) Lihan Zhang et al. CHEMBIOCHEM
- Screening microalgae as potential sources of antioxidants
- (2016) Mariana F. G. Assunção et al. JOURNAL OF APPLIED PHYCOLOGY
- Modulation of fatty acids and hydrocarbons inAnabaena7120 and itsntcAmutant under calcium
- (2016) Savita Singh et al. JOURNAL OF BASIC MICROBIOLOGY
- Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center
- (2016) Alice R. Wattam et al. NUCLEIC ACIDS RESEARCH
- Genome-Scale Metabolic Model for the Green Alga Chlorella vulgaris UTEX 395 Accurately Predicts Phenotypes under Autotrophic, Heterotrophic, and Mixotrophic Growth Conditions
- (2016) Cristal Zuñiga et al. PLANT PHYSIOLOGY
- A Comprehensively Curated Genome-Scale Two-Cell Model for the Heterocystous Cyanobacterium Anabaena sp. PCC 7120
- (2016) David Malatinszky et al. PLANT PHYSIOLOGY
- Siderophores in Iron Metabolism: From Mechanism to Therapy Potential
- (2016) Briana R. Wilson et al. TRENDS IN MOLECULAR MEDICINE
- Assessment of Anabaena sp. Strain PCC 7120 as a Heterologous Expression Host for Cyanobacterial Natural Products: Production of Lyngbyatoxin A
- (2016) Patrick Videau et al. ACS Synthetic Biology
- From DNA to FBA: How to Build Your Own Genome-Scale Metabolic Model
- (2016) Daniel A. Cuevas et al. Frontiers in Microbiology
- Expanding the Role of FurA as Essential Global Regulator in Cyanobacteria
- (2016) Andrés González et al. PLoS One
- Characterization of thylakoid lipid membranes from cyanobacteria and higher plants by molecular dynamics simulations
- (2015) Floris J. van Eerden et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES
- Impact of nitrogen limitation on biomass, photosynthesis, and lipid accumulation in Chlorella sorokiniana
- (2015) Sangeeta Negi et al. JOURNAL OF APPLIED PHYCOLOGY
- Exploring cyanobacterial genomes for natural product biosynthesis pathways
- (2015) Melinda L. Micallef et al. Marine Genomics
- Installing extra bicarbonate transporters in the cyanobacterium Synechocystis sp. PCC6803 enhances biomass production
- (2015) Nina A. Kamennaya et al. METABOLIC ENGINEERING
- BiGG Models: A platform for integrating, standardizing and sharing genome-scale models
- (2015) Zachary A. King et al. NUCLEIC ACIDS RESEARCH
- Metabolic engineering of cyanobacteria for the synthesis of commodity products
- (2015) S. Andreas Angermayr et al. TRENDS IN BIOTECHNOLOGY
- Escher: A Web Application for Building, Sharing, and Embedding Data-Rich Visualizations of Biological Pathways
- (2015) Zachary A. King et al. PLoS Computational Biology
- Polyhydroxyalkanoates, challenges and opportunities
- (2014) Ying Wang et al. CURRENT OPINION IN BIOTECHNOLOGY
- Carotenoid composition of three bloom-forming algae species
- (2014) J. Deli et al. FOOD RESEARCH INTERNATIONAL
- 13C flux analysis of cyanobacterial metabolism
- (2014) Adeola O. Adebiyi et al. PHOTOSYNTHESIS RESEARCH
- Cell-specific gene expression in Anabaena variabilis grown phototrophically, mixotrophically, and heterotrophically
- (2013) Jeong-Jin Park et al. BMC GENOMICS
- COBRApy: COnstraints-Based Reconstruction and Analysis for Python
- (2013) Ali Ebrahim et al. BMC Systems Biology
- The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases
- (2013) Ron Caspi et al. NUCLEIC ACIDS RESEARCH
- The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
- (2013) Ross Overbeek et al. NUCLEIC ACIDS RESEARCH
- Anabaena sp. PCC7120 transformed with glycine methylation genes from Aphanothece halophytica synthesized glycine betaine showing increased tolerance to salt
- (2012) Rungaroon Waditee-Sirisattha et al. ARCHIVES OF MICROBIOLOGY
- The diversity of cyanobacterial metabolism: genome analysis of multiple phototrophic microorganisms
- (2012) Christian Beck et al. BMC GENOMICS
- Reconstruction and Comparison of the Metabolic Potential of Cyanobacteria Cyanothece sp. ATCC 51142 and Synechocystis sp. PCC 6803
- (2012) Rajib Saha et al. PLoS One
- Detailing the optimality of photosynthesis in cyanobacteria through systems biology analysis
- (2012) J. Nogales et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cultivation of filamentous cyanobacteria (blue-green algae) in agro-industrial wastes and wastewaters: A review
- (2011) Giorgos Markou et al. APPLIED ENERGY
- Cyanobacteria and microalgae: A positive prospect for biofuels
- (2011) Asha Parmar et al. BIORESOURCE TECHNOLOGY
- Directional RNA deep sequencing sheds new light on the transcriptional response of Anabaena sp. strain PCC 7120 to combined-nitrogen deprivation
- (2011) Britt L Flaherty et al. BMC GENOMICS
- Engineering cyanobacteria to generate high-value products
- (2011) Daniel C. Ducat et al. TRENDS IN BIOTECHNOLOGY
- Effects of nitrogen source and concentration on biomass and oil production of a Scenedesmus rubescens like microalga
- (2010) Qiang Lin et al. BIORESOURCE TECHNOLOGY
- Computationally efficient flux variability analysis
- (2010) Steinn Gudmundsson et al. BMC BIOINFORMATICS
- What is flux balance analysis?
- (2010) Jeffrey D Orth et al. NATURE BIOTECHNOLOGY
- A protocol for generating a high-quality genome-scale metabolic reconstruction
- (2010) Ines Thiele et al. Nature Protocols
- The Genetic and Molecular Basis for Sunscreen Biosynthesis in Cyanobacteria
- (2010) E. P. Balskus et al. SCIENCE
- Unique Carotenoids in the Terrestrial Cyanobacterium Nostoc commune NIES-24: 2-Hydroxymyxol 2′-Fucoside, Nostoxanthin and Canthaxanthin
- (2009) Shinichi Takaichi et al. CURRENT MICROBIOLOGY
- Comprehensive Study of the Hydration and Dehydration Reactions of Carbon Dioxide in Aqueous Solution
- (2009) Xiaoguang Wang et al. JOURNAL OF PHYSICAL CHEMISTRY A
- Enzymatic Tailoring of Ornithine in the Biosynthesis of theRhizobiumCyclic Trihydroxamate Siderophore Vicibactin
- (2009) John R. Heemstra et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- The outer membrane of a heterocyst-forming cyanobacterium is a permeability barrier for uptake of metabolites that are exchanged between cells
- (2009) Kerstin Nicolaisen et al. MOLECULAR MICROBIOLOGY
- Applications of cyanobacteria in biotechnology
- (2008) R.M.M. Abed et al. JOURNAL OF APPLIED MICROBIOLOGY
- Substrate Specificities and Availability of Fucosyltransferase and -Carotene Hydroxylase for Myxol 2'-Fucoside Synthesis in Anabaena sp. Strain PCC 7120 Compared with Synechocystis sp. Strain PCC 6803
- (2008) M. Mochimaru et al. JOURNAL OF BACTERIOLOGY
- Alr0397 Is an Outer Membrane Transporter for the Siderophore Schizokinen in Anabaena sp. Strain PCC 7120
- (2008) K. Nicolaisen et al. JOURNAL OF BACTERIOLOGY
- ABC-type amino acid uptake transporters Bgt and N-II of Anabaena sp. strain PCC 7120 share an ATPase subunit and are expressed in vegetative cells and heterocysts
- (2008) Rafael Pernil et al. MOLECULAR MICROBIOLOGY
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