Limited and Strain-Specific Transcriptional and Growth Responses to Acquisition of a Multidrug Resistance Plasmid in Genetically Diverse Escherichia coli Lineages

Large-scale assessment of antimicrobial resistance marker databases for genetic phenotype prediction: a systematic review

(2020) Norhan Mahfouz et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

NDM Metallo-β-Lactamases and Their Bacterial Producers in Health Care Settings

(2019) Wenjing Wu et al.   CLINICAL MICROBIOLOGY REVIEWS

Diversification of Colonization Factors in a Multidrug-Resistant Escherichia coli Lineage Evolving under Negative Frequency-Dependent Selection

(2019) Alan McNally et al.   mBio

Phenotypical profile and global transcriptomic profile of Hypervirulent Klebsiella pneumoniae due to carbapenemase-encoding plasmid acquisition

(2019) Dan Long et al.   BMC GENOMICS

The Ecology and Evolution of Pangenomes

(2019) Michael A. Brockhurst et al.   CURRENT BIOLOGY

The evolution and transmission of multi-drug resistant Escherichia coli and Klebsiella pneumoniae: the complexity of clones and plasmids

(2019) Steven J Dunn et al.   CURRENT OPINION IN MICROBIOLOGY

Plasmid‐chromosome cross‐talks

(2019) Ludovic Vial et al.   ENVIRONMENTAL MICROBIOLOGY

Complete genomic characterization of two Escherichia coli lineages responsible for a cluster of carbapenem-resistant infections in a Chinese hospital

(2018) Zhiyong Zong et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Fitness cost of mcr-1-mediated polymyxin resistance in Klebsiella pneumoniae

(2018) Sue C Nang et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Clinically Relevant Plasmid-Host Interactions Indicate that Transcriptional and Not Genomic Modifications Ameliorate Fitness Costs of Klebsiella pneumoniae Carbapenemase-Carrying Plasmids

(2018) Michelle M. C. Buckner et al.   mBio

Integrative analysis of fitness and metabolic effects of plasmids in Pseudomonas aeruginosa PAO1

(2018) Alvaro San Millan et al.   ISME Journal

Cross-resistance is modular in bacteria–phage interactions

(2018) Rosanna C. T. Wright et al.   PLOS BIOLOGY

Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

(2017) Ryan R. Wick et al.   PLoS Computational Biology

Impact of blaNDM-1 on fitness and pathogenicity of Escherichia coli and Klebsiella pneumoniae

(2016) Stephan Göttig et al.   INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS

Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations

(2016) Alan McNally et al.   PLoS Genetics

The Role of Epidemic Resistance Plasmids and International High-Risk Clones in the Spread of Multidrug-Resistant Enterobacteriaceae

(2015) Amy J. Mathers et al.   CLINICAL MICROBIOLOGY REVIEWS

Parallel Compensatory Evolution Stabilizes Plasmids across the Parasitism-Mutualism Continuum

(2015) Ellie Harrison et al.   CURRENT BIOLOGY

A plasmid-encoded UmuD homologue regulates expression of Pseudomonas aeruginosa SOS genes

(2015) Amada Díaz-Magaña et al.   MICROBIOLOGY-SGM

Interactions between horizontally acquired genes create a fitness cost in Pseudomonas aeruginosa

(2015) Alvaro San Millan et al.   Nature Communications

A New Clone Sweeps Clean: the Enigmatic Emergence of Escherichia coli Sequence Type 131

(2014) Ritu Banerjee et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Modulation of primary cell function of hostPseudomonasbacteria by the conjugative plasmid pCAR1

(2014) Yurika Takahashi et al.   ENVIRONMENTAL MICROBIOLOGY

Global dissemination of a multidrug resistant Escherichia coli clone

(2014) N. K. Petty et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The 216-bpmarBgene of themarRABoperon inEscherichia coliencodes a periplasmic protein which reduces the transcription rate ofmarA

(2013) Laura Vinué et al.   FEMS MICROBIOLOGY LETTERS

Characteristics of NDM-1-Producing Escherichia coli Isolates That Belong to the Successful and Virulent Clone ST131

(2011) Gisele Peirano et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Conjugative DNA Transfer Induces the Bacterial SOS Response and Promotes Antibiotic Resistance Development through Integron Activation

(2010) Zeynep Baharoglu et al.   PLoS Genetics

The R1 Conjugative Plasmid Increases Escherichia coli Biofilm Formation through an Envelope Stress Response

(2008) X. Yang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY