Desulfobacterales stimulates nitrate reduction in the mangrove ecosystem of a subtropical gulf

Structure and function of the Arctic and Antarctic marine microbiota as revealed by metagenomics

(2020) Shunan Cao et al.   Microbiome

Isotopic Evidence that Nitrogen Enrichment Intensifies Nitrogen Losses to the Atmosphere from Subtropical Mangroves

(2019) Carla R. G. Reis et al.   ECOSYSTEMS

An evaluation of primers for detecting denitrifiers via their functional genes

(2019) Yanjun Ma et al.   ENVIRONMENTAL MICROBIOLOGY

Metagenomic exploration of the interactions between N and P cycling and SOM turnover in an apple orchard with a cover crop fertilized for 9 years

(2019) Wei Zheng et al.   BIOLOGY AND FERTILITY OF SOILS

Urea fertilization decreases soil bacterial diversity, but improves microbial biomass, respiration, and N-cycling potential in a semiarid grassland

(2019) Chao Zhang et al.   BIOLOGY AND FERTILITY OF SOILS

Metagenomes and metatranscriptomes shed new light on the microbial-mediated sulfur cycle in a Siberian soda lake

(2019) Charlotte D. Vavourakis et al.   BMC BIOLOGY

First Insights into the Microbiome of a Mangrove Tree Reveal Significant Differences in Taxonomic and Functional Composition among Plant and Soil Compartments

(2019) Witoon Purahong et al.   Microorganisms

Effects of Salt on Root Aeration, Nitrification, and Nitrogen Uptake in Mangroves

(2019) Yan Zhao et al.   Forests

Organic carbon burial and sources in soils of coastal mudflat and mangrove ecosystems

(2019) Sigit D. Sasmito et al.   CATENA

Nitrogen loss through anaerobic ammonium oxidation coupled with iron reduction in a mangrove wetland

(2018) Q. S. Guan et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

The microbial nitrogen-cycling network

(2018) Marcel M. M. Kuypers et al.   NATURE REVIEWS MICROBIOLOGY

Nitrogen fate in a subtropical mangrove swamp: Potential association with seawater-groundwater exchange

(2018) Kai Xiao et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Methane emissions partially offset “blue carbon” burial in mangroves

(2018) Judith A. Rosentreter et al.   Science Advances

NCycDB: a curated integrative database for fast and accurate metagenomic profiling of nitrogen cycling genes

(2018) Qichao Tu et al.   BIOINFORMATICS

Metagenome complexity and template length are the main causes of bias in PCR-based bacteria community analysis

(2018) Wentao Peng et al.   JOURNAL OF BASIC MICROBIOLOGY

Corrigendum: Shotgun metagenomics, from sampling to analysis

(2017) Christopher Quince et al.   NATURE BIOTECHNOLOGY

Metagenomic reconstruction of nitrogen cycling pathways in a CO 2 -enriched grassland ecosystem

(2017) Qichao Tu et al.   SOIL BIOLOGY & BIOCHEMISTRY

Mangrove Sedimentation and Response to Relative Sea-Level Rise

(2016) C.D. Woodroffe et al.   Annual Review of Marine Science

Potential role of anammox in nitrogen removal in a freshwater reservoir, Jiulonghu Reservoir (China)

(2016) Li-dong Shen et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Dissimilatory nitrate reduction to ammonium conserves nitrogen in anthropogenically affected subtropical mangrove sediments in Southeast China

(2016) Wenzhi Cao et al.   MARINE POLLUTION BULLETIN

Global overview on nitrogen dynamics in mangroves and consequences of increasing nitrogen availability for these systems

(2016) Carla Roberta Gonçalves Reis et al.   PLANT AND SOIL

Global biogeography of microbial nitrogen-cycling traits in soil

(2016) Michaeline B. Nelson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Factors Influencing Removal of Sewage Nitrogen Through Denitrification in Mangrove Soils

(2016) Yo-Jin Shiau et al.   WETLANDS

Nitrogen Cycling Potential of a Grassland Litter Microbial Community

(2015) Michaeline B. Nelson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

(2015) Dinghua Li et al.   BIOINFORMATICS

Environmental characteristics of Agulhas rings affect interocean plankton transport

(2015) E. Villar et al.   SCIENCE

Carbon Cycling and Storage in Mangrove Forests

(2014) Daniel M. Alongi   Annual Review of Marine Science

The Fate of Nitrate in Intertidal Permeable Sediments

(2014) Hannah K. Marchant et al.   PLoS One

The Importance of Dissimilatory Nitrate Reduction to Ammonium (DNRA) in the Nitrogen Cycle of Coastal Ecosystems

(2013) Anne Giblin et al.   OCEANOGRAPHY

GeoChip-based analysis of the functional gene diversity and metabolic potential of soil microbial communities of mangroves

(2012) Shijie Bai et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Co-occurrence and distribution of nitrite-dependent anaerobic ammonium and methane-oxidizing bacteria in a paddy soil

(2012) Yu Wang et al.   FEMS MICROBIOLOGY LETTERS

Growing Unculturable Bacteria

(2012) E. J. Stewart   JOURNAL OF BACTERIOLOGY

Integrative analysis of environmental sequences using MEGAN4

(2011) D. H. Huson et al.   GENOME RESEARCH

Wetlands as Sinks for Reactive Nitrogen at Continental and Global Scales: A Meta-Analysis

(2010) Stephen J. Jordan et al.   ECOSYSTEMS

Ab initio gene identification in metagenomic sequences

(2010) Wenhan Zhu et al.   NUCLEIC ACIDS RESEARCH

Summer fluxes of atmospheric greenhouse gases N2O, CH4 and CO2 from mangrove soil in South China

(2010) G.C. Chen et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Nutrition of mangroves

(2010) R. Reef et al.   TREE PHYSIOLOGY

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS