Further engineering of R. toruloides for the production of terpenes from lignocellulosic biomass

Production of ent-kaurene from lignocellulosic hydrolysate in Rhodosporidium toruloides

(2020) Gina M. Geiselman et al.   Microbial Cell Factories

Monoterpene production by the carotenogenic yeast Rhodosporidium toruloides

(2019) Xun Zhuang et al.   Microbial Cell Factories

A toolset of constitutive promoters for metabolic engineering of Rhodosporidium toruloides

(2019) Luísa Czamanski Nora et al.   Microbial Cell Factories

Alpha-Terpineol production from an engineered Saccharomyces cerevisiae cell factory

(2019) Chuanbo Zhang et al.   Microbial Cell Factories

Metabolic engineering of Escherichia coli for production of mixed isoprenoid alcohols and their derivatives

(2018) Bakht Zada et al.   Biotechnology for Biofuels

Chemical composition and antifungal activity of the essential oil of Zhumeria majdae , Heracleum persicum and Eucalyptus sp. against some important phytopathogenic fungi

(2017) M. Davari et al.   JOURNAL DE MYCOLOGIE MEDICALE

Characterization of feedback-resistant mevalonate kinases from the methanogenic archaeons Methanosaeta concilii and Methanocella paludicola

(2017) Ekaterina Kazieva et al.   MICROBIOLOGY-SGM

Towards synthesis of monoterpenes and derivatives using synthetic biology

(2016) Ziga Zebec et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

DMR (deacetylation and mechanical refining) processing of corn stover achieves high monomeric sugar concentrations (230 g L−1) during enzymatic hydrolysis and high ethanol concentrations (>10% v/v) during fermentation without hydrolysate purification or concentration

(2016) Xiaowen Chen et al.   Energy & Environmental Science

Functional characterization of a geraniol synthase-encoding gene from Camptotheca acuminata and its application in production of geraniol in Escherichia coli

(2016) Fei Chen et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Rewriting yeast central carbon metabolism for industrial isoprenoid production

(2016) Adam L. Meadows et al.   NATURE

EngineeringRhodosporidium toruloidesfor increased lipid production

(2015) Shuyan Zhang et al.   BIOTECHNOLOGY AND BIOENGINEERING

Bioprospecting—fuels from fungi

(2015) Gary Allan Strobel   BIOTECHNOLOGY LETTERS

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Toward better understanding of artifacts in variant calling from high-coverage samples

(2014) Heng Li   BIOINFORMATICS

Multiple roles of the coding sequence 5′ end in gene expression regulation

(2014) Tamir Tuller et al.   NUCLEIC ACIDS RESEARCH

Kinetics of Phosphomevalonate Kinase from Saccharomyces cerevisiae

(2014) David E. Garcia et al.   PLoS One

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

Metabolic engineering of Escherichia coli for limonene and perillyl alcohol production

(2013) Jorge Alonso-Gutierrez et al.   METABOLIC ENGINEERING

Selection on codon bias in yeast: a transcriptional hypothesis

(2013) Edoardo Trotta   NUCLEIC ACIDS RESEARCH

Enhancement of Ganoderic Acid Accumulation by Overexpression of an N-Terminally Truncated 3-Hydroxy-3-Methylglutaryl Coenzyme A Reductase Gene in the Basidiomycete Ganoderma lucidum

(2012) Jun-Wei Xu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Strategies for strain improvement in Fusarium fujikuroi: overexpression and localization of key enzymes of the isoprenoid pathway and their impact on gibberellin biosynthesis

(2012) Sabine Albermann et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Carotenoid-based phenotypic screen of the yeast deletion collection reveals new genes with roles in isoprenoid production

(2012) Bilge Özaydın et al.   METABOLIC ENGINEERING

Design, implementation and practice of JBEI-ICE: an open source biological part registry platform and tools

(2012) T. S. Ham et al.   NUCLEIC ACIDS RESEARCH

CNVnator: An approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing

(2011) A. Abyzov et al.   GENOME RESEARCH

Optimization of a heterologous mevalonate pathway through the use of variant HMG-CoA reductases

(2011) Suzanne M. Ma et al.   METABOLIC ENGINEERING

Identification and microbial production of a terpene-based advanced biofuel

(2011) Pamela P. Peralta-Yahya et al.   Nature Communications

An Evolutionarily Conserved Mechanism for Controlling the Efficiency of Protein Translation

(2010) Tamir Tuller et al.   CELL

Hypoxylon sp., an Endophyte of Persea indica, Producing 1,8-Cineole and Other Bioactive Volatiles with Fuel Potential

(2010) Angela R. Tomsheck et al.   MICROBIAL ECOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Redirection of flux through the FPP branch-point inSaccharomyces cerevisiaeby down-regulating squalene synthase

(2008) Eric M. Paradise et al.   BIOTECHNOLOGY AND BIOENGINEERING