HippoUnit: A software tool for the automated testing and systematic comparison of detailed models of hippocampal neurons based on electrophysiological data

The microcircuits of striatum in silico

(2020) J. J. Johannes Hjorth et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Scientific Case for Brain Simulations

(2019) Gaute T. Einevoll et al.   NEURON

Brian 2, an intuitive and efficient neural simulator

(2019) Marcel Stimberg et al.   eLife

The physiological variability of channel density in hippocampal CA1 pyramidal cells and interneurons explored using a unified data-driven modeling workflow

(2018) Rosanna Migliore et al.   PLoS Computational Biology

Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience

(2016) Robert A. McDougal et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Is realistic neuronal modeling realistic?

(2016) Mara Almog et al.   JOURNAL OF NEUROPHYSIOLOGY

The Human Brain Project: Creating a European Research Infrastructure to Decode the Human Brain

(2016) Katrin Amunts et al.   NEURON

Modeling the Cerebellar Microcircuit: New Strategies for a Long-Standing Issue

(2016) Egidio D’Angelo et al.   Frontiers in Cellular Neuroscience

Interneuronal mechanisms of hippocampal theta oscillations in a full-scale model of the rodent CA1 circuit

(2016) Marianne J Bezaire et al.   eLife

BluePyOpt: Leveraging Open Source Software and Cloud Infrastructure to Optimise Model Parameters in Neuroscience

(2016) Werner Van Geit et al.   Frontiers in Neuroinformatics

Reconstruction and Simulation of Neocortical Microcircuitry

(2015) Henry Markram et al.   CELL

Robust circuit rhythms in small circuits arise from variable circuit components and mechanisms

(2015) Eve Marder et al.   CURRENT OPINION IN NEUROBIOLOGY

Mapping the electrophysiological and morphological properties of CA1 pyramidal neurons along the longitudinal hippocampal axis

(2015) Ruchi Malik et al.   HIPPOCAMPUS

The neocortical microcircuit collaboration portal: a resource for rat somatosensory cortex

(2015) Srikanth Ramaswamy et al.   Frontiers in Neural Circuits

The 40-year history of modeling active dendrites in cerebellar Purkinje cells: emergence of the first single cell “community model”

(2015) James M. Bower   Frontiers in Computational Neuroscience

Hippocampome.org: a knowledge base of neuron types in the rodent hippocampus

(2015) Diek W Wheeler et al.   eLife

A Quantitative Description of Dendritic Conductances and Its Application to Dendritic Excitation in Layer 5 Pyramidal Neurons

(2014) M. Almog et al.   JOURNAL OF NEUROSCIENCE

NeuroElectro: a window to the world's neuron electrophysiology data

(2014) Shreejoy J. Tripathy et al.   Frontiers in Neuroinformatics

A flexible, interactive software tool for fitting the parameters of neuronal models

(2014) Péter Friedrich et al.   Frontiers in Neuroinformatics

Neurons within the Same Network Independently Achieve Conserved Output by Differentially Balancing Variable Conductance Magnitudes

(2013) J. L. Ransdell et al.   JOURNAL OF NEUROSCIENCE

On the mechanisms underlying the depolarization block in the spiking dynamics of CA1 pyramidal neurons

(2012) Daniela Bianchi et al.   JOURNAL OF COMPUTATIONAL NEUROSCIENCE

Intrinsic excitability of CA1 pyramidal neurones from the rat dorsal and ventral hippocampus

(2012) Kelly A. Dougherty et al.   JOURNAL OF PHYSIOLOGY-LONDON

Hippocampal Pyramidal Neurons Comprise Two Distinct Cell Types that Are Countermodulated by Metabotropic Receptors

(2012) Austin R. Graves et al.   NEURON

Toward a full-scale computational model of the rat dentate gyrus

(2012) Calvin J. Schneider et al.   Frontiers in Neural Circuits

Multiple models to capture the variability in biological neurons and networks

(2011) Eve Marder et al.   NATURE NEUROSCIENCE

A modeling study suggesting how a reduction in the context-dependent input on CA1 pyramidal neurons could generate schizophrenic behavior

(2011) Michele Migliore et al.   NEURAL NETWORKS

NineML – a description language for spiking neuron network modeling: the abstraction layer

(2010) Ivan Raikov et al.   BMC NEUROSCIENCE

NeuroML: A Language for Describing Data Driven Models of Neurons and Networks with a High Degree of Biological Detail

(2010) Padraig Gleeson et al.   PLoS Computational Biology

Synapse Distribution Suggests a Two-Stage Model of Dendritic Integration in CA1 Pyramidal Neurons

(2009) Yael Katz et al.   NEURON

Pathway Interactions and Synaptic Plasticity in the Dendritic Tuft Regions of CA1 Pyramidal Neurons

(2009) Hiroto Takahashi et al.   NEURON

Temperature dependence of N-methyl-d-aspartate receptor channels and N-methyl-d-aspartate receptor excitatory postsynaptic currents

(2009) M. Korinek et al.   NEUROSCIENCE

Functional significance of axonal Kv7 channels in hippocampal pyramidal neurons

(2008) M. M. Shah et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA