Single-molecule long-read sequencing reveals a conserved intact long RNA profile in sperm
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Title
Single-molecule long-read sequencing reveals a conserved intact long RNA profile in sperm
Authors
Keywords
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Journal
Nature Communications
Volume 12, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-03-01
DOI
10.1038/s41467-021-21524-6
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Note: Only part of the references are listed.- Ribosomes guide pachytene piRNA formation on long intergenic piRNA precursors
- (2020) Yu H. Sun et al. NATURE CELL BIOLOGY
- Evolutionarily conserved pachytene piRNA loci are highly divergent among modern humans
- (2020) Deniz M. Özata et al. Nature Ecology & Evolution
- An atlas of cell types in the mouse epididymis and vas deferens
- (2020) Vera D Rinaldi et al. eLife
- Sperm RNA code programmes the metabolic health of offspring
- (2019) Yunfang Zhang et al. Nature Reviews Endocrinology
- Parental Advisory: Maternal and Paternal Stress Can Impact Offspring Neurodevelopment
- (2018) Jennifer C Chan et al. BIOLOGICAL PSYCHIATRY
- SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification
- (2018) Manuel Tardaguila et al. GENOME RESEARCH
- A technical assessment of the porcine ejaculated spermatozoa for a sperm-specific RNA-seq analysis
- (2018) Marta Gòdia et al. Systems Biology in Reproductive Medicine
- A Comprehensive Roadmap of Murine Spermatogenesis Defined by Single-Cell RNA-Seq
- (2018) Christopher Daniel Green et al. DEVELOPMENTAL CELL
- Alterations in sperm long RNA contribute to the epigenetic inheritance of the effects of postnatal trauma
- (2018) K. Gapp et al. MOLECULAR PSYCHIATRY
- Salmon provides fast and bias-aware quantification of transcript expression
- (2017) Rob Patro et al. NATURE METHODS
- The emerging complexity of the tRNA world: mammalian tRNAs beyond protein synthesis
- (2017) Paul Schimmel NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Sperm-carried RNAs play critical roles in mouse embryonic development
- (2017) Lei Guo et al. Oncotarget
- Domestic chickens activate a piRNA defense against avian leukosis virus
- (2017) Yu Huining Sun et al. eLife
- Obesity and Bariatric Surgery Drive Epigenetic Variation of Spermatozoa in Humans
- (2016) Ida Donkin et al. Cell Metabolism
- Is the hook of muroid rodent's sperm related to sperm train formation?
- (2016) M. Tourmente et al. JOURNAL OF EVOLUTIONARY BIOLOGY
- Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown
- (2016) Mihaela Pertea et al. Nature Protocols
- Transgenerational inheritance: Models and mechanisms of non-DNA sequence-based inheritance
- (2016) E. A. Miska et al. SCIENCE
- Response to Comment on “Absence of sperm RNA elements correlates with idiopathic male infertility”
- (2016) Meritxell Jodar et al. Science Translational Medicine
- Comment on “Absence of sperm RNA elements correlates with idiopathic male infertility”
- (2016) Heike Cappallo-Obermann et al. Science Translational Medicine
- Differential Expression of Long Noncoding RNAs between Sperm Samples from Diabetic and Non-Diabetic Mice
- (2016) Guang-Jian Jiang et al. PLoS One
- Spermatozoa input concentrations and RNA isolation methods on RNA yield and quality in bull (Bos taurus)
- (2015) Sivashanmugam Parthipan et al. ANALYTICAL BIOCHEMISTRY
- Widespread Co-translational RNA Decay Reveals Ribosome Dynamics
- (2015) Vicent Pelechano et al. CELL
- I’m Eating for Two: Parental Dietary Effects on Offspring Metabolism
- (2015) Oliver J. Rando et al. CELL
- Translation in the mammalian oocyte in space and time
- (2015) Andrej Susor et al. CELL AND TISSUE RESEARCH
- Transgenerational epigenetic programming via sperm microRNA recapitulates effects of paternal stress
- (2015) Ali B. Rodgers et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Sperm tsRNAs contribute to intergenerational inheritance of an acquired metabolic disorder
- (2015) Q. Chen et al. SCIENCE
- Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals
- (2015) U. Sharma et al. SCIENCE
- Absence of sperm RNA elements correlates with idiopathic male infertility
- (2015) Meritxell Jodar et al. Science Translational Medicine
- PacBio Sequencing and Its Applications
- (2015) Anthony Rhoads et al. GENOMICS PROTEOMICS & BIOINFORMATICS
- piPipes: a set of pipelines for piRNA and transposon analysis via small RNA-seq, RNA-seq, degradome- and CAGE-seq, ChIP-seq and genomic DNA sequencing
- (2014) Bo W. Han et al. BIOINFORMATICS
- High-Resolution Mapping of Chromatin Packaging in Mouse Embryonic Stem Cells and Sperm
- (2014) Benjamin R. Carone et al. DEVELOPMENTAL CELL
- Reduced pachytene piRNAs and translation underlie spermiogenic arrest in Maelstrom mutant mice
- (2014) J. Castaneda et al. EMBO JOURNAL
- The human testis-specific proteome defined by transcriptomics and antibody-based profiling
- (2014) D. Djureinovic et al. MOLECULAR HUMAN REPRODUCTION
- Implication of sperm RNAs in transgenerational inheritance of the effects of early trauma in mice
- (2014) Katharina Gapp et al. NATURE NEUROSCIENCE
- Targeted Combinatorial Alternative Splicing Generates Brain Region-Specific Repertoires of Neurexins
- (2014) Dietmar Schreiner et al. NEURON
- Defining a personal, allele-specific, and single-molecule long-read transcriptome
- (2014) Hagen Tilgner et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Understanding Sperm Heterogeneity: Biological and Practical Implications
- (2014) M Ramón et al. REPRODUCTION IN DOMESTIC ANIMALS
- ASPeak: an abundance sensitive peak detection algorithm for RIP-Seq
- (2013) A. Kucukural et al. BIOINFORMATICS
- Cryopreserved Bovine Spermatozoal Transcript Profile as Revealed by High-Throughput Ribonucleic Acid Sequencing1
- (2013) Christopher J. Card et al. BIOLOGY OF REPRODUCTION
- The presence, role and clinical use of spermatozoal RNAs
- (2013) Meritxell Jodar et al. HUMAN REPRODUCTION UPDATE
- An Ancient Transcription Factor Initiates the Burst of piRNA Production during Early Meiosis in Mouse Testes
- (2013) Xin Zhiguo Li et al. MOLECULAR CELL
- A single-molecule long-read survey of the human transcriptome
- (2013) Donald Sharon et al. NATURE BIOTECHNOLOGY
- Comparative analysis of RNA sequencing methods for degraded or low-input samples
- (2013) Xian Adiconis et al. NATURE METHODS
- De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
- (2013) Brian J Haas et al. Nature Protocols
- Stability, delivery and functions of human sperm RNAs at fertilization
- (2013) Edward Sendler et al. NUCLEIC ACIDS RESEARCH
- Characterization of the human ESC transcriptome by hybrid sequencing
- (2013) K. F. Au et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evaluation of the effectiveness of semen storage and sperm purification methods for spermatozoa transcript profiling
- (2013) Shihong Mao et al. Systems Biology in Reproductive Medicine
- Reprogramming and the mammalian germline: the Weismann barrier revisited
- (2012) Davood Sabour et al. CURRENT OPINION IN CELL BIOLOGY
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
- (2012) Guangchuang Yu et al. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY
- Selective Depletion of rRNA Enables Whole Transcriptome Profiling of Archival Fixed Tissue
- (2012) John D. Morlan et al. PLoS One
- Angiogenin-Induced tRNA Fragments Inhibit Translation Initiation
- (2011) Pavel Ivanov et al. MOLECULAR CELL
- Cleavage of rRNA ensures translational cessation in sperm at fertilization
- (2011) G.D. Johnson et al. MOLECULAR HUMAN REPRODUCTION
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq
- (2011) P. J. Shepard et al. RNA
- Differential expression of porcine sperm microRNAs and their association with sperm morphology and motility
- (2011) Erin Curry et al. THERIOGENOLOGY
- Paternally Induced Transgenerational Environmental Reprogramming of Metabolic Gene Expression in Mammals
- (2010) Benjamin R. Carone et al. CELL
- Surfing the wave, cycle, life history, and genes/proteins expressed by testicular germ cells. Part 1: Background to spermatogenesis, spermatogonia, and spermatocytes
- (2009) Louis Hermo et al. MICROSCOPY RESEARCH AND TECHNIQUE
- Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling
- (2009) N. T. Ingolia et al. SCIENCE
- Identification and sequencing of remnant messenger RNAs found in domestic swine (Sus scrofa) fresh ejaculated spermatozoa
- (2008) C.C. Yang et al. ANIMAL REPRODUCTION SCIENCE
- Birth of Mice after Intracytoplasmic Injection of Single Purified Sperm Nuclei and Detection of Messenger RNAs and MicroRNAs in the Sperm Nuclei1
- (2008) Wei Yan et al. BIOLOGY OF REPRODUCTION
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