Spatiotemporal dynamics of marine microbial communities following a Phaeocystis bloom: biogeography and co‐occurrence patterns

Phylogenetic Responses of Marine Free-Living Bacterial Community to Phaeocystis globosa Bloom in Beibu Gulf, China

(2020) Nan Li et al.   Frontiers in Microbiology

Short-term dynamics and interactions of marine protist communities during the spring–summer transition

(2018) Lyria Berdjeb et al.   ISME Journal

Fluctuating interaction network and time-varying stability of a natural fish community

(2018) Masayuki Ushio et al.   NATURE

Co-occurrence patterns of soybean rhizosphere microbiome at a continental scale

(2018) Baogang Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Cropping practices manipulate abundance patterns of root and soil microbiome members paving the way to smart farming

(2018) Kyle Hartman et al.   Microbiome

Community dynamics of free-living and particle-attached bacteria following a reservoir Microcystis bloom

(2018) Min Liu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Strong impact of anthropogenic contamination on the co-occurrence patterns of a riverine microbial community

(2017) Anyi Hu et al.   ENVIRONMENTAL MICROBIOLOGY

Biogeography and ecological diversity patterns of rare and abundant bacteria in oil-contaminated soils

(2017) Shuo Jiao et al.   MOLECULAR ECOLOGY

Soil networks become more connected and take up more carbon as nature restoration progresses

(2017) Elly Morriën et al.   Nature Communications

Complementary Metaproteomic Approaches to Assess the Bacterioplankton Response toward a Phytoplankton Spring Bloom in the Southern North Sea

(2017) Lars Wöhlbrand et al.   Frontiers in Microbiology

Distinct Network Interactions in Particle-Associated and Free-Living Bacterial Communities during a Microcystis aeruginosa Bloom in a Plateau Lake

(2017) Caiyun Yang et al.   Frontiers in Microbiology

Effects of temperature, salinity, and irradiance on the growth of harmful algal bloom species Phaeocystis globosa Scherffel (Prymnesiophyceae) isolated from the South China Sea

(2016) Ning Xu et al.   CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY

The interconnected rhizosphere: High network complexity dominates rhizosphere assemblages

(2016) Shengjing Shi et al.   ECOLOGY LETTERS

Photosynthetic inhibition and oxidative stress to the toxic Phaeocystis globosa caused by a diketopiperazine isolated from products of algicidal bacterium metabolism

(2016) Shuo Tan et al.   JOURNAL OF MICROBIOLOGY

Bacterial communities in oil contaminated soils: Biogeography and co-occurrence patterns

(2016) Shuo Jiao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Long-term successional dynamics of microbial association networks in anaerobic digestion processes

(2016) Linwei Wu et al.   WATER RESEARCH

Bacterioplankton Biogeography of the Atlantic Ocean: A Case Study of the Distance-Decay Relationship

(2016) Mathias Milici et al.   Frontiers in Microbiology

Long-term oil contamination increases deterministic assembly processes in soil microbes

(2015) Yuting Liang et al.   ECOLOGICAL APPLICATIONS

The biogeography of abundant and rare bacterioplankton in the lakes and reservoirs of China

(2015) Lemian Liu et al.   ISME Journal

Structure and function of the global ocean microbiome

(2015) S. Sunagawa et al.   SCIENCE

Zonation of bacterioplankton communities along aging upwelled water in the northern Benguela upwelling

(2015) Benjamin Bergen et al.   Frontiers in Microbiology

The green impact: bacterioplankton response toward a phytoplankton spring bloom in the southern North Sea assessed by comparative metagenomic and metatranscriptomic approaches

(2015) Bernd Wemheuer et al.   Frontiers in Microbiology

Drivers shaping the diversity and biogeography of total and active bacterial communities in the South China Sea

(2014) Yao Zhang et al.   MOLECULAR ECOLOGY

Master recyclers: features and functions of bacteria associated with phytoplankton blooms

(2014) Alison Buchan et al.   NATURE REVIEWS MICROBIOLOGY

Deciphering microbial interactions and detecting keystone species with co-occurrence networks

(2014) David Berry et al.   Frontiers in Microbiology

Microbial community responses to anthropogenically induced environmental change: towards a systems approach

(2013) Andrew Bissett et al.   ECOLOGY LETTERS

Responses of the coastal bacterial community to viral infection of the algae Phaeocystis globosa

(2013) Abdul R Sheik et al.   ISME Journal

Patterns and Processes of Microbial Community Assembly

(2013) D. R. Nemergut et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

GenGIS 2: Geospatial Analysis of Traditional and Genetic Biodiversity, with New Gradient Algorithms and an Extensible Plugin Framework

(2013) Donovan H. Parks et al.   PLoS One

Bacterial diversity in Greenlandic soils as affected by potato cropping and inorganic versus organic fertilization

(2013) Charlotte Frydenlund Michelsen et al.   POLAR BIOLOGY

Advection shapes Southern Ocean microbial assemblages independent of distance and environment effects

(2013) David Wilkins et al.   Nature Communications

Microbial Diversity and Biochemical Potential Encoded by Thermal Spring Metagenomes Derived from the Kamchatka Peninsula

(2013) Bernd Wemheuer et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

Taxonomic composition of the particle-attached and free-living bacterial assemblages in the Northwest Mediterranean Sea analyzed by pyrosequencing of the 16S rRNA

(2013) Bibiana G. Crespo et al.   MicrobiologyOpen

Use of phytoplankton-derived dissolved organic carbon by different types of bacterioplankton

(2012) Hugo Sarmento et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient

(2012) Barbara J Campbell et al.   ISME Journal

Ocean currents shape the microbiome of Arctic marine sediments

(2012) Leila J Hamdan et al.   ISME Journal

Beyond biogeographic patterns: processes shaping the microbial landscape

(2012) China A. Hanson et al.   NATURE REVIEWS MICROBIOLOGY

Microbial interactions: from networks to models

(2012) Karoline Faust et al.   NATURE REVIEWS MICROBIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Pole-to-pole biogeography of surface and deep marine bacterial communities

(2012) J.-F. Ghiglione et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial Co-occurrence Relationships in the Human Microbiome

(2012) Karoline Faust et al.   PLoS Computational Biology

Genomic Insights into Bacterial DMSP Transformations

(2011) Mary Ann Moran et al.   Annual Review of Marine Science

Temporal attachment dynamics by distinct bacterial taxa during a dinoflagellate bloom

(2011) X Mayali et al.   AQUATIC MICROBIAL ECOLOGY

Global patterns in the biogeography of bacterial taxa

(2010) Diana R. Nemergut et al.   ENVIRONMENTAL MICROBIOLOGY

Development of Phaeocystis globosa blooms in the upwelling waters of the South Central coast of Viet Nam

(2010) Doan-Nhu Hai et al.   JOURNAL OF MARINE SYSTEMS

Trade-Offs between Competition and Defense Specialists among Unicellular Planktonic Organisms: the "Killing the Winner" Hypothesis Revisited

(2010) C. Winter et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Water mass-specificity of bacterial communities in the North Atlantic revealed by massively parallel sequencing

(2010) HÉLÈNE AGOGUÉ et al.   MOLECULAR ECOLOGY

Functional Molecular Ecological Networks

(2010) J. Zhou et al.   mBio

Mesoscale and microscale spatial variability of bacteria and viruses during a Phaeocystis globosa bloom in the Eastern English Channel

(2008) J.R. Seymour et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Impact of the Phaeocystis globosa spring bloom on the intertidal benthic compartment in the eastern English Channel: A synthesis

(2008) Nicolas Spilmont et al.   MARINE POLLUTION BULLETIN

Molecular eco-systems biology: towards an understanding of community function

(2008) Jeroen Raes et al.   NATURE REVIEWS MICROBIOLOGY