Resource aromaticity affects bacterial community successions in response to different sources of dissolved organic matter

Differentiation strategies of soil rare and abundant microbial taxa in response to changing climatic regimes

(2020) Yuting Liang et al.   ENVIRONMENTAL MICROBIOLOGY

DOM composition alters ecosystem function during microbial processing of isolated sources

(2019) Juliana D’Andrilli et al.   BIOGEOCHEMISTRY

Deterministic Assembly and Diversity Gradient Altered the Biofilm Community Performances of Bioreactors

(2019) Zhaojing Zhang et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Resource heterogeneity structures aquatic bacterial communities

(2019) Mario E. Muscarella et al.   ISME Journal

Microbial transformation of virus-induced dissolved organic matter from picocyanobacteria: coupling of bacterial diversity and DOM chemodiversity

(2019) Zhao Zhao et al.   ISME Journal

Linking dissolved organic matter composition and bacterioplankton communities in an Amazon floodplain system

(2019) Michaela L. Melo et al.   LIMNOLOGY AND OCEANOGRAPHY

Mobilization of aged and biolabile soil carbon by tropical deforestation

(2019) Travis W. Drake et al.   Nature Geoscience

A general framework for quantitatively assessing ecological stochasticity

(2019) Daliang Ning et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Balance between community assembly processes mediates species coexistence in agricultural soil microbiomes across eastern China

(2019) Shuo Jiao et al.   ISME Journal

Seasonal Variability of Conditionally Rare Taxa in the Water Column Bacterioplankton Community of Subtropical Reservoirs in China

(2019) Pascaline Nyirabuhoro et al.   MICROBIAL ECOLOGY

Human activities determine quantity and composition of dissolved organic matter in lakes along the Yangtze River

(2019) Dong Liu et al.   WATER RESEARCH

Response of bacterial community in composition and function to the various DOM at river confluences in the urban area

(2019) Yi Li et al.   WATER RESEARCH

Distinct patterns and processes of abundant and rare eukaryotic plankton communities following a reservoir cyanobacterial bloom

(2018) Yuanyuan Xue et al.   ISME Journal

Keystone taxa as drivers of microbiome structure and functioning

(2018) Samiran Banerjee et al.   NATURE REVIEWS MICROBIOLOGY

Climate warming leads to divergent succession of grassland microbial communities

(2018) Xue Guo et al.   Nature Climate Change

Eutrophication Leads to Accumulation of Recalcitrant Autochthonous Organic Matter in Coastal Environment

(2018) Eero Asmala et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Characterization of CDOM in saline and freshwater lakes across China using spectroscopic analysis

(2018) Kaishan Song et al.   WATER RESEARCH

Succession and diversity of microbial communities in landfills with depths and ages and its association with dissolved organic matter and heavy metals

(2018) Si-jia Liu et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Cascading influence of inorganic nitrogen sources on DOM production, composition, lability and microbial community structure in the open ocean

(2017) S. J. Goldberg et al.   ENVIRONMENTAL MICROBIOLOGY

Distinct succession patterns of abundant and rare bacteria in temporal microcosms with pollutants

(2017) Shuo Jiao et al.   ENVIRONMENTAL POLLUTION

Toward Quantitative Understanding of the Bioavailability of Dissolved Organic Matter in Freshwater Lake during Cyanobacteria Blooming

(2017) Leilei Bai et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Where less may be more: how the rare biosphere pulls ecosystems strings

(2017) Alexandre Jousset et al.   ISME Journal

Stochastic Community Assembly: Does It Matter in Microbial Ecology?

(2017) Jizhong Zhou et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Microbial Community Response to Terrestrially Derived Dissolved Organic Matter in the Coastal Arctic

(2017) Rachel E. Sipler et al.   Frontiers in Microbiology

When riverine dissolved organic matter (DOM) meets labile DOM in coastal waters: changes in bacterial community activity and composition

(2016) Marine Blanchet et al.   AQUATIC SCIENCES

Deciphering associations between dissolved organic molecules and bacterial communities in a pelagic marine system

(2016) Helena Osterholz et al.   ISME Journal

Dynamics of bacterial abundance and the related environmental factors in large shallow eutrophic Lake Taihu

(2016) Yi Gong et al.   JOURNAL OF FRESHWATER ECOLOGY

Strong linkages between DOM optical properties and main clades of aquatic bacteria

(2016) Valentina Amaral et al.   LIMNOLOGY AND OCEANOGRAPHY

Marine methane paradox explained by bacterial degradation of dissolved organic matter

(2016) Daniel J. Repeta et al.   Nature Geoscience

Selective consumption and metabolic allocation of terrestrial and algal carbon determine allochthony in lake bacteria

(2015) François Guillemette et al.   ISME Journal

Experimental insights into the importance of aquatic bacterial community composition to the degradation of dissolved organic matter

(2015) Jürg B Logue et al.   ISME Journal

Ecology and exploration of the rare biosphere

(2015) Michael D. J. Lynch et al.   NATURE REVIEWS MICROBIOLOGY

Disentangling mechanisms that mediate the balance between stochastic and deterministic processes in microbial succession

(2015) Francisco Dini-Andreote et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Pre-treatments, characteristics, and biogeochemical dynamics of dissolved organic matter in sediments: A review

(2015) Meilian Chen et al.   WATER RESEARCH

Distinct patterns of microbial metabolism associated to riverine dissolved organic carbon of different source and quality

(2015) Martin Berggren et al.   Journal of Geophysical Research-Biogeosciences

Source and biolability of ancient dissolved organic matter in glacier and lake ecosystems on the Tibetan Plateau

(2014) Robert G.M. Spencer et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Stochasticity, succession, and environmental perturbations in a fluidic ecosystem

(2014) Jizhong Zhou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Spectroscopic characterisation of dissolved organic matter changes in drinking water treatment: From PARAFAC analysis to online monitoring wavelengths

(2014) Yulia Shutova et al.   WATER RESEARCH

Conditionally Rare Taxa Disproportionately Contribute to Temporal Changes in Microbial Diversity

(2014) A. Shade et al.   mBio

Chemodiversity of dissolved organic matter in lakes driven by climate and hydrology

(2014) Anne M. Kellerman et al.   Nature Communications

Fluorescence spectroscopy and multi-way techniques. PARAFAC

(2013) Kathleen R. Murphy et al.   Analytical Methods

OpenFluor– an online spectral library of auto-fluorescence by organic compounds in the environment

(2013) Kathleen R. Murphy et al.   Analytical Methods

Phylogenetic and structural response of heterotrophic bacteria to dissolved organic matter of different chemical composition in a continuous culture study

(2013) M. Landa et al.   ENVIRONMENTAL MICROBIOLOGY

Quantifying community assembly processes and identifying features that impose them

(2013) James C Stegen et al.   ISME Journal

Increases in terrestrially derived carbon stimulate organic carbon processing and CO2 emissions in boreal aquatic ecosystems

(2013) Jean-François Lapierre et al.   Nature Communications

Differentiating the degradation dynamics of algal and terrestrial carbon within complex natural dissolved organic carbon in temperate lakes

(2013) François Guillemette et al.   Journal of Geophysical Research-Biogeosciences

Identifying fluorescent pulp mill effluent in the Gulf of Maine and its watershed

(2012) Kaelin M. Cawley et al.   MARINE POLLUTION BULLETIN

The Rare Bacterial Biosphere

(2011) Carlos Pedrós-Alió   Annual Review of Marine Science

Microbial degradation of dissolved organic matter (DOM) and its influence on phenanthrene–DOM interactions

(2011) Jin Hur et al.   CHEMOSPHERE

Organic Matter Fluorescence in Municipal Water Recycling Schemes: Toward a Unified PARAFAC Model

(2011) Kathleen R. Murphy et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Species sorting and neutral processes are both important during the initial assembly of bacterial communities

(2011) Silke Langenheder et al.   ISME Journal

Lakes and reservoirs as regulators of carbon cycling and climate

(2011) Lars J. Tranvik et al.   LIMNOLOGY AND OCEANOGRAPHY

Characterizing dissolved organic matter fluorescence with parallel factor analysis: a tutorial

(2011) Colin A. Stedmon et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

A simple and efficient method for the solid-phase extraction of dissolved organic matter (SPE-DOM) from seawater

(2011) Thorsten Dittmar et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Using null models to disentangle variation in community dissimilarity from variation in α-diversity

(2011) Jonathan M. Chase et al.   Ecosphere

Absorption spectral slopes and slope ratios as indicators of molecular weight, source, and photobleaching of chromophoric dissolved organic matter

(2010) John R. Helms et al.   LIMNOLOGY AND OCEANOGRAPHY

Microbial production of recalcitrant dissolved organic matter: long-term carbon storage in the global ocean

(2010) Nianzhi Jiao et al.   NATURE REVIEWS MICROBIOLOGY

Associations between species and groups of sites: indices and statistical inference

(2009) Miquel De Cáceres et al.   ECOLOGY

Efficient aquatic bacterial metabolism of dissolved low-molecular-weight compounds from terrestrial sources

(2009) Martin Berggren et al.   ISME Journal

Properties of fluorescent dissolved organic matter in the Gironde Estuary

(2009) A. Huguet et al.   ORGANIC GEOCHEMISTRY

The contribution of phytoplankton degradation to chromophoric dissolved organic matter (CDOM) in eutrophic shallow lakes: Field and experimental evidence

(2009) Yunlin Zhang et al.   WATER RESEARCH

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Niche Partitioning Increases Resource Exploitation by Diverse Communities

(2008) Deborah L. Finke et al.   SCIENCE

Distinguishing between terrestrial and autochthonous organic matter sources in marine environments using fluorescence spectroscopy

(2007) Kathleen R. Murphy et al.   MARINE CHEMISTRY