Brain microvasculature has a common topology with local differences in geometry that match metabolic load

Mapping the Fine-Scale Organization and Plasticity of the Brain Vasculature

(2020) Christoph Kirst et al.   CELL

The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas

(2020) Quanxin Wang et al.   CELL

Dynamic capillary stalls in reperfused ischemic penumbra contribute to injury: A hyperacute role for neutrophils in persistent traffic jams

(2020) Şefik E Erdener et al.   JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM

Machine learning analysis of whole mouse brain vasculature

(2020) Mihail Ivilinov Todorov et al.   NATURE METHODS

Denser brain capillary network with preserved pericytes in Alzheimer's disease

(2020) Francisco Fernandez‐Klett et al.   BRAIN PATHOLOGY

Neutrophils Obstructing Brain Capillaries Are a Major Cause of No-Reflow in Ischemic Stroke

(2020) Mohamad El Amki et al.   Cell Reports

Neutrophil adhesion in brain capillaries reduces cortical blood flow and impairs memory function in Alzheimer’s disease mouse models

(2019) Jean C. Cruz Hernández et al.   NATURE NEUROSCIENCE

Direct wavefront sensing enables functional imaging of infragranular axons and spines

(2019) Rui Liu et al.   NATURE METHODS

More homogeneous capillary flow and oxygenation in deeper cortical layers correlate with increased oxygen extraction

(2019) Baoqiang Li et al.   eLife

Reconstruction of 1,000 Projection Neurons Reveals New Cell Types and Organization of Long-Range Connectivity in the Mouse Brain

(2019) Johan Winnubst et al.   CELL

The mass transfer coefficient for oxygen transport from blood to tissue in cerebral cortex

(2019) Timothy W Secomb et al.   JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM

Dependence of resting-state fMRI fluctuation amplitudes on cerebral cortical orientation relative to the direction of B0 and anatomical axes

(2019) Olivia Viessmann et al.   NEUROIMAGE

The cerebral angiome: High resolution MicroCT imaging of the whole brain cerebrovasculature in female and male mice

(2019) D.D. Quintana et al.   NEUROIMAGE

Cerebral oxygenation during locomotion is modulated by respiration

(2019) Qingguang Zhang et al.   Nature Communications

Numerical and length densities of microvessels in the human brain: Correlation with preferential orientation of microvessels in the cerebral cortex, subcortical grey matter and white matter, pons and cerebellum

(2018) Tereza Kubíková et al.   JOURNAL OF CHEMICAL NEUROANATOMY

CLARITY for High-resolution Imaging and Quantification of Vasculature in the Whole Mouse Brain

(2018) Lin-Yuan Zhang et al.   Aging and Disease

Direct vascular channels connect skull bone marrow and the brain surface enabling myeloid cell migration

(2018) Fanny Herisson et al.   NATURE NEUROSCIENCE

Whole-Brain Vasculature Reconstruction at the Single Capillary Level

(2018) Antonino Paolo Di Giovanna et al.   Scientific Reports

Panoptic imaging of transparent mice reveals whole-body neuronal projections and skull–meninges connections

(2018) Ruiyao Cai et al.   NATURE NEUROSCIENCE

Brain Glucose Metabolism: Integration of Energetics with Function

(2018) Gerald A. Dienel   PHYSIOLOGICAL REVIEWS

Local hippocampal fast gamma rhythms precede brain-wide hyperemic patterns during spontaneous rodent REM sleep

(2018) Antoine Bergel et al.   Nature Communications

3D visualization and quantification of microvessels in the whole ischemic mouse brain using solvent-based clearing and light sheet microscopy

(2017) Erlen Lugo-Hernandez et al.   JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM

Vascular density and distribution in neocortex

(2017) Franca Schmid et al.   NEUROIMAGE

The impact of vessel size, orientation and intravascular contribution on the neurovascular fingerprint of BOLD bSSFP fMRI

(2017) Mario Gilberto Báez-Yánez et al.   NEUROIMAGE

Precise Cerebral Vascular Atlas in Stereotaxic Coordinates of Whole Mouse Brain

(2017) Benyi Xiong et al.   Frontiers in Neuroanatomy

Depth-dependent flow and pressure characteristics in cortical microvascular networks

(2017) Franca Schmid et al.   PLoS Computational Biology

A cryptography-based approach for movement decoding

(2017) Eva L. Dyer et al.   Nature Biomedical Engineering

Anisotropic cerebral vascular architecture causes orientation dependency in cerebral blood flow and volume measured with dynamic susceptibility contrast magnetic resonance imaging

(2016) Enedino Hernández-Torres et al.   JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM

The capillary bed offers the largest hemodynamic resistance to the cortical blood supply

(2016) Ian Gopal Gould et al.   JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM

Mapping oxygen concentration in the awake mouse brain

(2016) Declan G Lyons et al.   eLife

A platform for brain-wide imaging and reconstruction of individual neurons

(2016) Michael N Economo et al.   eLife

Quantifying the Microvascular Origin of BOLD-fMRI from First Principles with Two-Photon Microscopy and an Oxygen-Sensitive Nanoprobe

(2015) L. Gagnon et al.   JOURNAL OF NEUROSCIENCE

Hematocrit Distribution and Tissue Oxygenation in Large Microcirculatory Networks

(2015) Ian G. Gould et al.   MICROCIRCULATION

Robust and Fragile Aspects of Cortical Blood Flow in Relation to the Underlying Angioarchitecture

(2015) Andy Y. Shih et al.   MICROCIRCULATION

Percolation thresholds on three-dimensional lattices with three nearest neighbors

(2013) Jonathan Tran et al.   JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT

The cortical angiome: an interconnected vascular network with noncolumnar patterns of blood flow

(2013) Pablo Blinder et al.   NATURE NEUROSCIENCE

3D BrainCV: Simultaneous visualization and analysis of cells and capillaries in a whole mouse brain with one-micron voxel resolution

(2013) Jingpeng Wu et al.   NEUROIMAGE

Energetic cost of brain functional connectivity

(2013) D. Tomasi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sugar for the brain: the role of glucose in physiological and pathological brain function

(2013) Philipp Mergenthaler et al.   TRENDS IN NEUROSCIENCES

Calibrating BOLD fMRI Activations with Neurovascular and Anatomical Constraints

(2012) Xin Di et al.   CEREBRAL CORTEX

Oxygen Consumption and Blood Flow Coupling in Human Motor Cortex during Intense Finger Tapping: Implication for a Role of Lactate

(2012) Manouchehr S Vafaee et al.   JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM

3D Slicer as an image computing platform for the Quantitative Imaging Network

(2012) Andriy Fedorov et al.   MAGNETIC RESONANCE IMAGING

Vectorization of optically sectioned brain microvasculature: Learning aids completion of vascular graphs by connecting gaps and deleting open-ended segments

(2012) John P. Kaufhold et al.   MEDICAL IMAGE ANALYSIS

Coupling and robustness of intra-cortical vascular territories

(2012) Romain Guibert et al.   NEUROIMAGE

"Overshoot" of O2 Is Required to Maintain Baseline Tissue Oxygenation at Locations Distal to Blood Vessels

(2011) A. Devor et al.   JOURNAL OF NEUROSCIENCE

Point Set Registration: Coherent Point Drift

(2010) Andriy Myronenko et al.   IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE

Two-Photon NADH Imaging Exposes Boundaries of Oxygen Diffusion in Cortical Vascular Supply Regions

(2010) Karl A Kasischke et al.   JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM

Glial and neuronal control of brain blood flow

(2010) David Attwell et al.   NATURE

Chronic optical access through a polished and reinforced thinned skull

(2010) Patrick J Drew et al.   NATURE METHODS

Micro-Optical Sectioning Tomography to Obtain a High-Resolution Atlas of the Mouse Brain

(2010) A. Li et al.   SCIENCE

Guidance of Vascular Development

(2009) Bruno Larrivée et al.   CIRCULATION RESEARCH

Vascular Graph Model to Simulate the Cerebral Blood Flow in Realistic Vascular Networks

(2009) Johannes Reichold et al.   JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM

Correlations of Neuronal and Microvascular Densities in Murine Cortex Revealed by Direct Counting and Colocalization of Nuclei and Vessels

(2009) P. S. Tsai et al.   JOURNAL OF NEUROSCIENCE

The Microvascular System of the Striate and Extrastriate Visual Cortex of the Macaque

(2008) Bruno Weber et al.   CEREBRAL CORTEX