Direct wavefront sensing enables functional imaging of infragranular axons and spines

Functional imaging of visual cortical layers and subplate in awake mice with optimized three-photon microscopy

(2019) Murat Yildirim et al.   Nature Communications

Thy1 transgenic mice expressing the red fluorescent calcium indicator jRGECO1a for neuronal population imaging in vivo

(2018) Hod Dana et al.   PLoS One

Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR

(2018) Jonathan S. Marvin et al.   NATURE METHODS

NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data

(2017) Eftychios A. Pnevmatikakis et al.   JOURNAL OF NEUROSCIENCE METHODS

Assessing phototoxicity in live fluorescence imaging

(2017) P Philippe Laissue et al.   NATURE METHODS

In vivo three-photon imaging of activity of GCaMP6-labeled neurons deep in intact mouse brain

(2017) Dimitre G Ouzounov et al.   NATURE METHODS

Adaptive optical fluorescence microscopy

(2017) Na Ji   NATURE METHODS

Two-photon calcium imaging of the medial prefrontal cortex and hippocampus without cortical invasion

(2017) Masashi Kondo et al.   eLife

Precision mapping of the vibrissa representation within murine primary somatosensory cortex

(2016) Per M. Knutsen et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Sensitive red protein calcium indicators for imaging neural activity

(2016) Hod Dana et al.   eLife

Direct wavefront sensing for high-resolution in vivo imaging in scattering tissue

(2015) Kai Wang et al.   Nature Communications

Rapid adaptive optical recovery of optimal resolution over large volumes

(2014) Kai Wang et al.   NATURE METHODS

Two-Photon Microscopy as a Tool to Study Blood Flow and Neurovascular Coupling in the Rodent Brain

(2012) Andy Y Shih et al.   JOURNAL OF CEREBRAL BLOOD FLOW AND METABOLISM

Improving FRET dynamic range with bright green and red fluorescent proteins

(2012) Amy J Lam et al.   NATURE METHODS

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Superpenetration optical microscopy by iterative multiphoton adaptive compensation technique

(2012) J. Tang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cell Type–Specific Three-Dimensional Structure of Thalamocortical Circuits in a Column of Rat Vibrissal Cortex

(2011) Marcel Oberlaender et al.   CEREBRAL CORTEX

Two-photon calcium imaging of evoked activity from L5 somatosensory neurons in vivo

(2011) Wolfgang Mittmann et al.   NATURE NEUROSCIENCE

Adaptive optics confocal microscopy using direct wavefront sensing

(2011) Xiaodong Tao et al.   OPTICS LETTERS

A high-level 3D visualization API for Java and ImageJ

(2010) Benjamin Schmid et al.   BMC BIOINFORMATICS

Chronic optical access through a polished and reinforced thinned skull

(2010) Patrick J Drew et al.   NATURE METHODS

Adaptive optics via pupil segmentation for high-resolution imaging in biological tissues

(2009) Na Ji et al.   NATURE METHODS

Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window

(2009) Anthony Holtmaat et al.   Nature Protocols

Image-based adaptive optics for two-photon microscopy

(2009) Delphine Débarre et al.   OPTICS LETTERS

Single-neuron labeling with inducible Cre-mediated knockout in transgenic mice

(2008) Paul Young et al.   NATURE NEUROSCIENCE

Diffeomorphic demons: Efficient non-parametric image registration

(2008) Tom Vercauteren et al.   NEUROIMAGE

Efficient subpixel image registration algorithms

(2008) Manuel Guizar-Sicairos et al.   OPTICS LETTERS