A guide for kernel generalized regression methods for genomic-enabled prediction

Sparse Convolutional Neural Networks for Genome-Wide Prediction

(2020) Patrik Waldmann et al.   Frontiers in Genetics

On the approximation of interaction effect models by Hadamard powers of the additive genomic relationship

(2020) Johannes W.R. Martini et al.   THEORETICAL POPULATION BIOLOGY

Approximate Genome-Based Kernel Models for Large Data Sets Including Main Effects and Interactions

(2020) Jaime Cuevas et al.   Frontiers in Genetics

Crop Yield Prediction Using Deep Neural Networks

(2019) Saeed Khaki et al.   Frontiers in Plant Science

Applications of Machine Learning Methods to Genomic Selection in Breeding Wheat for Rust Resistance

(2018) Juan Manuel González-Camacho et al.   Plant Genome

A deep convolutional neural network approach for predicting phenotypes from genotypes

(2018) Wenlong Ma et al.   PLANTA

A novel linkage-disequilibrium corrected genomic relationship matrix for SNP-heritability estimation and genomic prediction

(2017) Boby Mathew et al.   HEREDITY

Genomic Prediction of Genotype × Environment Interaction Kernel Regression Models

(2016) Jaime Cuevas et al.   Plant Genome

Modeling Epistasis in Genomic Selection

(2015) Yong Jiang et al.   GENETICS

Modeling Epistasis in Genomic Selection

(2015) Yong Jiang et al.   GENETICS

Effective Genetic-Risk Prediction Using Mixed Models

(2014) David Golan et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Genome-Wide Regression and Prediction with the BGLR Statistical Package

(2014) P. Perez et al.   GENETICS

Detection and replication of epistasis influencing transcription in humans

(2014) Gibran Hemani et al.   NATURE

Gene-gene and gene-environment interactions detected by transcriptome sequence analysis in twins

(2014) Alfonso Buil et al.   NATURE GENETICS

Mixed Model Methods for Genomic Prediction and Variance Component Estimation of Additive and Dominance Effects Using SNP Markers

(2014) Yang Da et al.   PLoS One

Genome-enabled methods for predicting litter size in pigs: a comparison

(2013) L. Tusell et al.   Animal

Bayesian models with dominance effects for genomic evaluation of quantitative traits

(2012) ROBIN WELLMANN et al.   Genetics Research

The mystery of missing heritability: Genetic interactions create phantom heritability

(2012) O. Zuk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Predicting Genetic Values: A Kernel-Based Best Linear Unbiased Prediction With Genomic Data

(2011) Ulrike Ober et al.   GENETICS

Molecular mechanisms of epistasis within and between genes

(2011) Ben Lehner   TRENDS IN GENETICS

Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP

(2011) Jeffrey B. Endelman   Plant Genome

Prediction of Genetic Values of Quantitative Traits in Plant Breeding Using Pedigree and Molecular Markers

(2010) J. Crossa et al.   GENETICS

Radial basis function regression methods for predicting quantitative traits using SNP markers

(2010) NANYE LONG et al.   Genetics Research

Semi-parametric genomic-enabled prediction of genetic values using reproducing kernel Hilbert spaces methods

(2010) GUSTAVO DE LOS CAMPOS et al.   Genetics Research

Epistasis and Its Implications for Personal Genetics

(2009) Jason H. Moore et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Detecting gene–gene interactions that underlie human diseases

(2009) Heather J Cordell   NATURE REVIEWS GENETICS

Reproducing Kernel Hilbert Spaces Regression Methods for Genomic Assisted Prediction of Quantitative Traits

(2008) D. Gianola et al.   GENETICS