Migratory Zooplankton Excreta and Its Influence on Prokaryotic Communities

Different carboxyl‐rich alicyclic molecules proxy compounds select distinct bacterioplankton for oxidation of dissolved organic matter in the mesopelagic Sargasso Sea

(2020) Shuting Liu et al.   LIMNOLOGY AND OCEANOGRAPHY

Pangenomics Analysis Reveals Diversification of Enzyme Families and Niche Specialization in Globally Abundant SAR202 Bacteria

(2020) Jimmy H. W. Saw et al.   mBio

Dissolved organic matter dominating the photodegradation of free DNA bases in aquatic environments

(2020) Jing Li et al.   WATER RESEARCH

Effects of temperature and food concentration on pteropod metabolism along the Western Antarctic Peninsula

(2020) Patricia S. Thibodeau et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Progress and Challenges in Ocean Metaproteomics and Proposed Best Practices for Data Sharing

(2019) Mak A. Saito et al.   JOURNAL OF PROTEOME RESEARCH

Variations in Copepod Proteome and Respiration Rate in Association with Diel Vertical Migration and Circadian Cycle

(2018) Amy E. Maas et al.   BIOLOGICAL BULLETIN

Diel dynamics and coupling of heterotrophic prokaryotes and dissolved organic matter in epipelagic and mesopelagic waters of the central Red Sea

(2018) Francisca C. García et al.   ENVIRONMENTAL MICROBIOLOGY

Elevated p CO2 alters marine heterotrophic bacterial community composition and metabolic potential in response to a pulse of phytoplankton organic matter

(2018) Anna K. James et al.   ENVIRONMENTAL MICROBIOLOGY

Biological transformation of Arctic dissolved organic matter in a NE Greenland fjord

(2018) Maria Lund Paulsen et al.   LIMNOLOGY AND OCEANOGRAPHY

Crystal ball: the microbial map of the ocean

(2018) Alyson E. Santoro   Environmental Microbiology Reports

Metagenomic insights into zooplankton-associated bacterial communities

(2017) Daniele De Corte et al.   ENVIRONMENTAL MICROBIOLOGY

Crustacean zooplankton release copious amounts of dissolved organic matter as taurine in the ocean

(2017) Elisabeth L. Clifford et al.   LIMNOLOGY AND OCEANOGRAPHY

Extraction efficiency and quantification of dissolved metabolites in targeted marine metabolomics

(2017) Winifred M. Johnson et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

SAR202 Genomes from the Dark Ocean Predict Pathways for the Oxidation of Recalcitrant Dissolved Organic Matter

(2017) Zachary Landry et al.   mBio

Plankton networks driving carbon export in the oligotrophic ocean

(2016) Lionel Guidi et al.   NATURE

Substantial energy input to the mesopelagic ecosystem from the seasonal mixed-layer pump

(2016) Giorgio Dall'Olmo et al.   Nature Geoscience

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Dissolved organic matter in newly formed sea ice and surface seawater

(2015) Krista Longnecker   GEOCHIMICA ET COSMOCHIMICA ACTA

Environmental metabolomics: Analytical strategies

(2015) Melissa C. Kido Soule et al.   MARINE CHEMISTRY

Black Queen evolution: the role of leakiness in structuring microbial communities

(2015) J. Jeffrey Morris   TRENDS IN GENETICS

Respiration and ammonia excretion by marine metazooplankton taxa: synthesis toward a global-bathymetric model

(2014) Tsutomu Ikeda   MARINE BIOLOGY

Temporal dynamics and depth variations of dissolved free amino acids and polyamines in coastal seawater determined by high-performance liquid chromatography

(2014) Xinxin Lu et al.   MARINE CHEMISTRY

Krill Excretion Boosts Microbial Activity in the Southern Ocean

(2014) Javier Arístegui et al.   PLoS One

Spatiotemporal distributions of rare bacterioplankton populations indicate adaptive strategies in the oligotrophic ocean

(2013) KL Vergin et al.   AQUATIC MICROBIAL ECOLOGY

High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences

(2013) Kevin L Vergin et al.   ISME Journal

The Variability of the 16S rRNA Gene in Bacterial Genomes and Its Consequences for Bacterial Community Analyses

(2013) Tomáš Větrovský et al.   PLoS One

The Antarctic Krill Euphausia superba Shows Diurnal Cycles of Transcription under Natural Conditions

(2013) Cristiano De Pittà et al.   PLoS One

A cross-platform toolkit for mass spectrometry and proteomics

(2012) Matthew C Chambers et al.   NATURE BIOTECHNOLOGY

Experimental Incubations Elicit Profound Changes in Community Transcription in OMZ Bacterioplankton

(2012) Frank J. Stewart et al.   PLoS One

Comparative Genomics Reveals Adaptation by Alteromonas sp. SN2 to Marine Tidal-Flat Conditions: Cold Tolerance and Aromatic Hydrocarbon Metabolism

(2012) Renukaradhya K. Math et al.   PLoS One

Vitamins in the sea

(2012) S. J. Giovannoni   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Marine Microbes See a Sea of Gradients

(2012) R. Stocker   SCIENCE

Recalcitrant Dissolved Organic Carbon Fractions

(2011) Dennis A. Hansell   Annual Review of Marine Science

The Role of B Vitamins in Marine Biogeochemistry

(2011) Sergio A. Sañudo-Wilhelmy et al.   Annual Review of Marine Science

A Circadian Clock in Antarctic Krill: An Endogenous Timing System Governs Metabolic Output Rhythms in the Euphausid Species Euphausia superba

(2011) Mathias Teschke et al.   PLoS One

Metabolomic Analysis and Visualization Engine for LC−MS Data

(2010) Eugene Melamud et al.   ANALYTICAL CHEMISTRY

Dissolved organic carbon export and subsequent remineralization in the mesopelagic and bathypelagic realms of the North Atlantic basin

(2010) Craig A. Carlson et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Assessing the apparent imbalance between geochemical and biochemical indicators of meso- and bathypelagic biological activity: What the @$♯! is wrong with present calculations of carbon budgets?

(2010) Adrian B. Burd et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

The role of arctic zooplankton in biogeochemical cycles: respiration and excretion of ammonia and phosphate during summer

(2010) M. Alcaraz et al.   POLAR BIOLOGY

Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea

(2010) J. McCarren et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The genomic basis of trophic strategy in marine bacteria

(2009) F. M. Lauro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Seasonal dynamics of SAR11 populations in the euphotic and mesopelagic zones of the northwestern Sargasso Sea

(2008) Craig A Carlson et al.   ISME Journal

Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea

(2008) Sarah M Sowell et al.   ISME Journal

Biochemical composition and size distribution of organic matter at the Pacific and Atlantic time-series stations

(2008) Karl Kaiser et al.   MARINE CHEMISTRY

Amino acid and amino sugar yields and compositions as indicators of dissolved organic matter diagenesis

(2008) Jenny Davis et al.   ORGANIC GEOCHEMISTRY

Rapid chemotactic response enables marine bacteria to exploit ephemeral microscale nutrient patches

(2008) R. Stocker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA