Metagenomic insights into zooplankton-associated bacterial communities

Crustacean zooplankton release copious amounts of dissolved organic matter as taurine in the ocean

(2017) Elisabeth L. Clifford et al.   LIMNOLOGY AND OCEANOGRAPHY

Zooplankton Gut Passage Mobilizes Lithogenic Iron for Ocean Productivity

(2016) Katrin Schmidt et al.   CURRENT BIOLOGY

Copepod carcasses as microbial hot spots for pelagic denitrification

(2015) Ronnie N. Glud et al.   LIMNOLOGY AND OCEANOGRAPHY

Linkage between copepods and bacteria in the North Atlantic Ocean

(2014) D De Corte et al.   AQUATIC MICROBIAL ECOLOGY

Bacterial epibionts of Daphnia: a potential route for the transfer of dissolved organic carbon in freshwater food webs

(2014) Ester M Eckert et al.   ISME Journal

The regeneration of highly bioavailable iron by meso- and microzooplankton

(2014) Jochen Nuester et al.   LIMNOLOGY AND OCEANOGRAPHY

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

Bacterial profiling of White Plague Disease in a comparative coral species framework

(2013) Cornelia Roder et al.   ISME Journal

Oligotyping: differentiating between closely related microbial taxa using 16S rRNA gene data

(2013) A. Murat Eren et al.   Methods in Ecology and Evolution

Bacterial chitin degradation—mechanisms and ecophysiological strategies

(2013) Sara Beier et al.   Frontiers in Microbiology

A metaproteomic assessment of winter and summer bacterioplankton from Antarctic Peninsula coastal surface waters

(2012) Timothy J Williams et al.   ISME Journal

Nutrient requirements for growth of the extreme oligotroph ‘Candidatus Pelagibacter ubique’ HTCC1062 on a defined medium

(2012) Paul Carini et al.   ISME Journal

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

Long-term effects of ocean warming on the prokaryotic community: evidence from the vibrios

(2011) Luigi Vezzulli et al.   ISME Journal

Copepod guts as biogeochemical hotspots in the sea: Evidence from microelectrode profiling ofCalanusspp

(2011) Kam W. Tang et al.   LIMNOLOGY AND OCEANOGRAPHY

Linkage between crustacean zooplankton and aquatic bacteria

(2010) KW Tang et al.   AQUATIC MICROBIAL ECOLOGY

Composition, uniqueness and variability of the epiphytic bacterial community of the green alga Ulva australis

(2010) Catherine Burke et al.   ISME Journal

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

Environmental proteomics of microbial plankton in a highly productive coastal upwelling system

(2010) Sarah M Sowell et al.   ISME Journal

Distinct flavobacterial communities in contrasting water masses of the North Atlantic Ocean

(2010) Paola R Gómez-Pereira et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Bacteria dispersal by hitchhiking on zooplankton

(2010) H.-P. Grossart et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon

(2009) Rachel S. Poretsky et al.   ENVIRONMENTAL MICROBIOLOGY

Plankton composition and environmental factors contribute to Vibrio seasonality

(2009) Jeffrey W Turner et al.   ISME Journal

Bacterial diversity associated with freshwater zooplankton

(2009) Hans-Peter Grossart et al.   Environmental Microbiology Reports