New Transcriptome-Based SNP Markers for Noug (Guizotia abyssinica) and Their Conversion to KASP Markers for Population Genetics Analyses
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Title
New Transcriptome-Based SNP Markers for Noug (Guizotia abyssinica) and Their Conversion to KASP Markers for Population Genetics Analyses
Authors
Keywords
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Journal
Genes
Volume 11, Issue 11, Pages 1373
Publisher
MDPI AG
Online
2020-11-20
DOI
10.3390/genes11111373
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- (2013) Kathryn A. Hodgins et al. Molecular Ecology Resources
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- (2013) Nivedita Singh et al. PLoS One
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