New Transcriptome-Based SNP Markers for Noug (Guizotia abyssinica) and Their Conversion to KASP Markers for Population Genetics Analyses

Scale development and utilization of universal PCR-based and high-throughput KASP markers specific for chromosome arms of rye (Secale cereale L.)

(2020) Guohao Han et al.   BMC GENOMICS

Development and validation of KASP markers for the identification of Pea seedborne mosaic virus pathotype P1 resistance in Pisum sativum

(2020) Kylie D. Swisher Grimm et al.   PLANT DISEASE

Development and deployment of KASP markers for multiple alleles of Lr34 in wheat

(2020) Tilin Fang et al.   THEORETICAL AND APPLIED GENETICS

High-Density Genetic Linkage Mapping of Lepidium Based on Genotyping-by-Sequencing SNPs and Segregating Contig Tag Haplotypes

(2020) Mulatu Geleta et al.   Frontiers in Plant Science

Overcoming polyploidy pitfalls: a user guide for effective SNP conversion into KASP markers in wheat

(2020) M. Makhoul et al.   THEORETICAL AND APPLIED GENETICS

SNP Markers and Evaluation of Duplicate Holdings of Brassica oleracea in Two European Genebanks

(2020) Anna E. Palmé et al.   Plants-Basel

Deployment of SNP (CAPS and KASP) markers for allelic discrimination and easy access to functional variants for brown midrib genes bmr6 and bmr12 in Sorghum bicolor

(2019) Gloria Burow et al.   MOLECULAR BREEDING

Development and validation of a robust KASP marker for zt2 locus in faba bean ( Vicia faba )

(2019) Stefano Zanotto et al.   PLANT BREEDING

Molecular Characterization of Mung Bean Germplasm from the USDA Core Collection Using Newly Developed KASP-based SNP Markers

(2018) A. S. M. Faridul Islam et al.   CROP SCIENCE

Identification of a molecular marker tightly linked to bacterial wilt resistance in tomato by genome-wide SNP analysis

(2018) Boyoung Kim et al.   THEORETICAL AND APPLIED GENETICS

GWAS Analysis and QTL Identification of Fiber Quality Traits and Yield Components in Upland Cotton Using Enriched High-Density SNP Markers

(2018) Ruixian Liu et al.   Frontiers in Plant Science

Usefulness of a New Large Set of High Throughput EST-SNP Markers as a Tool for Olive Germplasm Collection Management

(2018) Angjelina Belaj et al.   Frontiers in Plant Science

Genetic diversity and population structure analyses of Plectranthus edulis (Vatke) Agnew collections from diverse agro-ecologies in Ethiopia using newly developed EST-SSRs marker system

(2018) Fekadu Gadissa et al.   BMC GENETICS

StructureSelector : A web-based software to select and visualize the optimal number of clusters using multiple methods

(2017) Yu-Long Li et al.   Molecular Ecology Resources

Development and Validation of KASP-SNP Markers for QTL Underlying Resistance to Stripe Rust in Common Wheat Cultivar P10057

(2017) Jianhui Wu et al.   PLANT DISEASE

Genetic Diversity within a Global Panel of Durum Wheat (Triticum durum) Landraces and Modern Germplasm Reveals the History of Alleles Exchange

(2017) Hafssa Kabbaj et al.   Frontiers in Plant Science

A Genome-Wide Association Study for Agronomic Traits in Soybean Using SNP Markers and SNP-Based Haplotype Analysis

(2017) Rodrigo Iván Contreras-Soto et al.   PLoS One

Genetic diversity in sorghum [Sorghum bicolor (L.) Moench] germplasm from Southern Africa as revealed by microsatellite markers and agro-morphological traits

(2016) Tiny Motlhaodi et al.   GENETIC RESOURCES AND CROP EVOLUTION

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Assessment of genetic diversity in Ethiopian field pea (Pisum sativum L.) accessions with newly developed EST-SSR markers

(2015) Abel Teshome et al.   BMC GENETICS

Comparison of Kompetitive Allele Specific PCR (KASP) and genotyping by sequencing (GBS) for quality control analysis in maize

(2015) Berhanu Tadesse Ertiro et al.   BMC GENOMICS

SNP identification and marker assay development for high-throughput selection of soybean cyst nematode resistance

(2015) Zi Shi et al.   BMC GENOMICS

Patterns of domestication in the Ethiopian oil-seed crop noug (Guizotia abyssinica)

(2015) Hannes Dempewolf et al.   Evolutionary Applications

Clumpak : a program for identifying clustering modes and packaging population structure inferences across K

(2015) Naama M. Kopelman et al.   Molecular Ecology Resources

Identification of QTLs for Rust Resistance in the Peanut Wild Species Arachis magna and the Development of KASP Markers for Marker-Assisted Selection

(2015) Soraya C. M. Leal-Bertioli et al.   G3-Genes Genomes Genetics

Nucleotide polymorphism and copy number variant detection using exome capture and next-generation sequencing in the polyploid grassPanicum virgatum

(2014) Joseph Evans et al.   PLANT JOURNAL

The importance of Guizotia abyssinica (niger) for sustainable food security in Ethiopia

(2013) Mulatu Geleta et al.   GENETIC RESOURCES AND CROP EVOLUTION

Genomics of Compositae crops: reference transcriptome assemblies and evidence of hybridization with wild relatives

(2013) Kathryn A. Hodgins et al.   Molecular Ecology Resources

Comparison of SSR and SNP Markers in Estimation of Genetic Diversity and Population Structure of Indian Rice Varieties

(2013) Nivedita Singh et al.   PLoS One

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

(2012) R. Peakall et al.   BIOINFORMATICS

Genetic Diversity of Arabica Coffee (Coffea arabicaL.) in Nicaragua as Estimated by Simple Sequence Repeat Markers

(2012) Mulatu Geleta et al.   TheScientificWorldJOURNAL

Functional Properties, Nutritional Value, and Industrial Applications of Niger Oilseeds (Guizotia abyssinicaCass.)

(2011) Mohamed Fawzy Ramadan   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Genetic diversity in sorghum (Sorghum bicolor (L.) Moench) accessions of Zambia as revealed by simple sequence repeats (SSR)

(2011) Dickson Ng'uni et al.   HEREDITAS

Variation and inheritance of oil content and fatty acid composition in niger (Guizotia abyssinica)

(2011) Mulatu Geleta et al.   JOURNAL OF FOOD COMPOSITION AND ANALYSIS

Development and application of a set of breeder-friendly SNP markers for genetic analyses and molecular breeding of rice (Oryza sativa L.)

(2011) Haodong Chen et al.   THEORETICAL AND APPLIED GENETICS

SNP-RFLPing 2: an updated and integrated PCR-RFLP tool for SNP genotyping

(2010) Hsueh-Wei Chang et al.   BMC BIOINFORMATICS

Population genetics of self-incompatibility and developing self-compatible genotypes in niger (Guizotia abyssinica)

(2010) Mulatu Geleta et al.   EUPHYTICA

Establishing genomic tools and resources for Guizotia abyssinica (L.f.) Cass.-the development of a library of expressed sequence tags, microsatellite loci, and the sequencing of its chloroplast genome

(2010) HANNES DEMPEWOLF et al.   Molecular Ecology Resources

Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows

(2010) LAURENT EXCOFFIER et al.   Molecular Ecology Resources

Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data

(2010) M. Moragues et al.   THEORETICAL AND APPLIED GENETICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

The karyotype and nucleoli of Guizotia abyssinica (Compositae)

(2008) KIFLE DAGNE et al.   HEREDITAS

Assessment of genetic diversity of Guizotia abyssinica (L.f.) Cass. (Asteraceae) from Ethiopia using amplified fragment length polymorphism

(2008) Mulatu Geleta et al.   Plant Genetic Resources-Characterization and Utilization