Reducing the Number of Mismatches between Hairs and Buccal References When Analysing mtDNA Heteroplasmic Variation by Massively Parallel Sequencing
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Title
Reducing the Number of Mismatches between Hairs and Buccal References When Analysing mtDNA Heteroplasmic Variation by Massively Parallel Sequencing
Authors
Keywords
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Journal
Genes
Volume 11, Issue 11, Pages 1355
Publisher
MDPI AG
Online
2020-11-17
DOI
10.3390/genes11111355
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Note: Only part of the references are listed.- Base specific variation rates at mtDNA positions 16093 and 16183 in human hairs
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- Bottleneck and selection in the germline and maternal age influence transmission of mitochondrial DNA in human pedigrees
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- Assessing heteroplasmic variant drift in the mtDNA control region of human hairs using an MPS approach
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- FDSTools: A software package for analysis of massively parallel sequencing data with the ability to recognise and correct STR stutter and other PCR or sequencing noise
- (2017) Jerry Hoogenboom et al. Forensic Science International-Genetics
- MPS analysis of the mtDNA hypervariable regions on the MiSeq with improved enrichment
- (2017) Mitchell M. Holland et al. INTERNATIONAL JOURNAL OF LEGAL MEDICINE
- Hairy matters: MtDNA quantity and sequence variation along and among human head hairs
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- Massively parallel sequencing of short tandem repeats—Population data and mixture analysis results for the PowerSeq™ system
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- Mitochondrial DNA heteroplasmy in the emerging field of massively parallel sequencing
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- Full mtGenome reference data: Development and characterization of 588 forensic-quality haplotypes representing three U.S. populations
- (2015) Rebecca S. Just et al. Forensic Science International-Genetics
- DNA Commission of the International Society for Forensic Genetics: Revised and extended guidelines for mitochondrial DNA typing
- (2014) W. Parson et al. Forensic Science International-Genetics
- Extensive pathogenicity of mitochondrial heteroplasmy in healthy human individuals
- (2014) K. Ye et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Next-Generation Sequencing of Human Mitochondrial Reference Genomes Uncovers High Heteroplasmy Frequency
- (2012) Maria Ximena Sosa et al. PLoS Computational Biology
- FLASH: fast length adjustment of short reads to improve genome assemblies
- (2011) T. Magoc et al. BIOINFORMATICS
- Investigation of Heteroplasmy in the Human Mitochondrial DNA Control Region: A Synthesis of Observations from More Than 5000 Global Population Samples
- (2009) Jodi A. Irwin et al. JOURNAL OF MOLECULAR EVOLUTION
- ‘Mitominis’: multiplex PCR analysis of reduced size amplicons for compound sequence analysis of the entire mtDNA control region in highly degraded samples
- (2008) Cordula Eichmann et al. INTERNATIONAL JOURNAL OF LEGAL MEDICINE
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