The orchestrated cellular and molecular responses of the kidney to endotoxin define a precise sepsis timeline
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Title
The orchestrated cellular and molecular responses of the kidney to endotoxin define a precise sepsis timeline
Authors
Keywords
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Journal
eLife
Volume 10, Issue -, Pages -
Publisher
eLife Sciences Publications, Ltd
Online
2021-01-11
DOI
10.7554/elife.62270
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Note: Only part of the references are listed.- CellPhoneDB: inferring cell–cell communication from combined expression of multi-subunit ligand–receptor complexes
- (2020) Mirjana Efremova et al. Nature Protocols
- Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage
- (2019) Dvir Aran et al. NATURE IMMUNOLOGY
- Sepsis associated acute kidney injury
- (2019) Jason T Poston et al. BMJ-British Medical Journal
- Characterization of cell fate probabilities in single-cell data with Palantir
- (2019) Manu Setty et al. NATURE BIOTECHNOLOGY
- The single-cell transcriptional landscape of mammalian organogenesis
- (2019) Junyue Cao et al. NATURE
- Representation and relative abundance of cell-type selective markers in whole-kidney RNA-Seq data
- (2019) Jevin Z. Clark et al. KIDNEY INTERNATIONAL
- The emergent landscape of the mouse gut endoderm at single-cell resolution
- (2019) Sonja Nowotschin et al. NATURE
- Comprehensive Integration of Single-Cell Data
- (2019) Tim Stuart et al. CELL
- Interferon-λ modulates dendritic cells to facilitate T cell immunity during infection with influenza A virus
- (2019) Emily A. Hemann et al. NATURE IMMUNOLOGY
- A single-nucleus RNA-sequencing pipeline to decipher the molecular anatomy and pathophysiology of human kidneys
- (2019) Blue B. Lake et al. Nature Communications
- Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- (2019) Andrew Ransick et al. DEVELOPMENTAL CELL
- Distant Organ Dysfunction in Acute Kidney Injury: A Review
- (2018) Sul A Lee et al. AMERICAN JOURNAL OF KIDNEY DISEASES
- Tie2 protects the vasculature against thrombus formation in systemic inflammation
- (2018) Sarah J. Higgins et al. JOURNAL OF CLINICAL INVESTIGATION
- Single-Cell Transcriptomics of a Human Kidney Allograft Biopsy Specimen Defines a Diverse Inflammatory Response
- (2018) Haojia Wu et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Integrating single-cell transcriptomic data across different conditions, technologies, and species
- (2018) Andrew Butler et al. NATURE BIOTECHNOLOGY
- Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease
- (2018) Jihwan Park et al. SCIENCE
- RNA velocity of single cells
- (2018) Gioele La Manno et al. NATURE
- Joint profiling of chromatin accessibility and gene expression in thousands of single cells
- (2018) Junyue Cao et al. SCIENCE
- Bacterial sepsis triggers an antiviral response that causes translation shutdown
- (2018) Takashi Hato et al. JOURNAL OF CLINICAL INVESTIGATION
- Advantages of Single-Nucleus over Single-Cell RNA Sequencing of Adult Kidney: Rare Cell Types and Novel Cell States Revealed in Fibrosis
- (2018) Haojia Wu et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Single-cell reconstruction of the early maternal–fetal interface in humans
- (2018) Roser Vento-Tormo et al. NATURE
- Endotoxin Preconditioning Reprograms S1 Tubules and Macrophages to Protect the Kidney
- (2017) Takashi Hato et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- SCENIC: single-cell regulatory network inference and clustering
- (2017) Sara Aibar et al. NATURE METHODS
- Single-cell sequencing reveals dissociation-induced gene expression in tissue subpopulations
- (2017) Susanne C van den Brink et al. NATURE METHODS
- Lung–Kidney Cross-Talk in the Critically Ill Patient
- (2016) Faeq Husain-Syed et al. AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
- Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
- (2016) P. L. Stahl et al. SCIENCE
- A Transcriptional Map of the Renal Tubule: Linking Structure to Function
- (2015) M. Kretzler et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Deep Sequencing in Microdissected Renal Tubules Identifies Nephron Segment-Specific Transcriptomes
- (2015) J. W. Lee et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- The Debate about Dendritic Cells and Macrophages in the Kidney
- (2015) Catherine Gottschalk et al. Frontiers in Immunology
- circlize implements and enhances circular visualization in R
- (2014) Zuguang Gu et al. BIOINFORMATICS
- Sepsis: Current Dogma and New Perspectives
- (2014) Clifford S. Deutschman et al. IMMUNITY
- The Macrophage Mediates the Renoprotective Effects of Endotoxin Preconditioning
- (2014) T. Hato et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells
- (2014) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Pivotal role of plasmacytoid dendritic cells in inflammation and NK-cell responses after TLR9 triggering in mice
- (2012) C. Guillerey et al. BLOOD
- PGC-1α promotes recovery after acute kidney injury during systemic inflammation in mice
- (2011) Mei Tran et al. JOURNAL OF CLINICAL INVESTIGATION
- Endotoxin Uptake by S1 Proximal Tubular Segment Causes Oxidative Stress in the Downstream S2 Segment
- (2011) R. Kalakeche et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Distinct Macrophage Phenotypes Contribute to Kidney Injury and Repair
- (2011) S. Lee et al. JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY
- Epithelial cell cycle arrest in G2/M mediates kidney fibrosis after injury
- (2010) Li Yang et al. NATURE MEDICINE
- Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
- (2008) Da Wei Huang et al. NUCLEIC ACIDS RESEARCH
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