Size Matters: An Evaluation of the Molecular Basis of Ontogenetic Modifications in the Composition of Bothrops jararacussu Snake Venom

Trait differentiation and modular toxin expression in palm-pitvipers

(2020) Andrew J. Mason et al.   BMC GENOMICS

Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna

(2020) Cristiano C. Nogueira et al.   South American Journal of Herpetology

CodAn: predictive models for precise identification of coding regions in eukaryotic transcripts

(2020) Pedro G Nachtigall et al.   BRIEFINGS IN BIOINFORMATICS

Ontogenetic study of Bothrops jararacussu venom composition reveals distinct profiles

(2020) Weslei da Silva Aguiar et al.   TOXICON

Reproduction in the pitviper Bothrops jararacussu: large females increase their reproductive output while small males increase their potential to mate

(2020) Karina M.P. Silva et al.   ZOOLOGY

Gradual and Discrete Ontogenetic Shifts in Rattlesnake Venom Composition and Assessment of Hormonal and Ecological Correlates

(2020) Richard B. Schonour et al.   Toxins

The origins and evolution of chromosomes, dosage compensation, and mechanisms underlying venom regulation in snakes

(2019) Drew R. Schield et al.   GENOME RESEARCH

Functional variability of Bothrops atrox venoms from three distinct areas across the Brazilian Amazon and consequences for human envenomings

(2019) Tiago H. Moretto Del-Rei et al.   TOXICON

“Bad things come in small packages”: predicting venom-induced coagulopathy in Bothrops atrox bites using snake ontogenetic parameters

(2019) Jorge Carlos Contreras Bernal et al.   CLINICAL TOXICOLOGY

Reproductive Biology of Bothrops atrox (Serpentes, Viperidae, Crotalinae) from the Brazilian Amazon

(2019) Karina M.P. Silva et al.   HERPETOLOGICA

Molecular mechanisms underlying intraspecific variation in snake venom

(2018) Diana R. Amazonas et al.   Journal of Proteomics

Evaluating the Performance of De Novo Assembly Methods for Venom-Gland Transcriptomics

(2018) Matthew Holding et al.   Toxins

Comparative venom-gland transcriptomics and venom proteomics of four Sidewinder Rattlesnake (Crotalus cerastes) lineages reveal little differential expression despite individual variation

(2018) Erich P. Hofmann et al.   Scientific Reports

Overview of MicroRNA Biogenesis, Mechanisms of Actions, and Circulation

(2018) Jacob O'Brien et al.   Frontiers in Endocrinology

Coagulotoxicity of Bothrops (Lancehead Pit-Vipers) Venoms from Brazil: Differential Biochemistry and Antivenom Efficacy Resulting from Prey-Driven Venom Variation

(2018) Leijiane Sousa et al.   Toxins

Ontogenetic Change in the Venom of Mexican Black-Tailed Rattlesnakes (Crotalus molossus nigrescens)

(2018) Miguel Borja et al.   Toxins

Integrated Venomics and Venom Gland Transcriptome Analysis of Juvenile and Adult Mexican Rattlesnakes Crotalus simus, C. tzabcan, and C. culminatus Revealed miRNA-modulated Ontogenetic Shifts

(2017) Jordi Durban et al.   JOURNAL OF PROTEOME RESEARCH

Functional proteomic analyses of Bothrops atrox venom reveals phenotypes associated with habitat variation in the Amazon

(2017) Leijiane F Sousa et al.   Journal of Proteomics

Effect of BjcuL, a lectin isolated from Bothrops jararacussu , on human peripheral blood mononuclear cells

(2017) Weverson Luciano Pires et al.   TOXICOLOGY IN VITRO

Combined venomics, venom gland transcriptomics, bioactivities, and antivenomics of two Bothrops jararaca populations from geographic isolated regions within the Brazilian Atlantic rainforest

(2016) Larissa Gonçalves-Machado et al.   Journal of Proteomics

A multicenter study benchmarks software tools for label-free proteome quantification

(2016) Pedro Navarro et al.   NATURE BIOTECHNOLOGY

Characterising the enzymatic profile of crude tentacle extracts from the South Atlantic jellyfish Olindias sambaquiensis (Cnidaria: Hydrozoa)

(2016) Paloma S. Knittel et al.   TOXICON

Comparison of venoms from wild and long-term captive Bothrops atrox snakes and characterization of Batroxrhagin, the predominant class PIII metalloproteinase from the venom of this species

(2015) L.A. Freitas-de-Sousa et al.   BIOCHIMIE

Flavorase, a novel non-haemorrhagic metalloproteinase in Protobothrops flavoviridis venom, is a target molecule of small serum protein-3

(2015) N. Shioi et al.   JOURNAL OF BIOCHEMISTRY

Phenotypic integration in the feeding system of the eastern diamondback rattlesnake (Crotalus adamanteus)

(2015) Mark J. Margres et al.   MOLECULAR ECOLOGY

The lethality test used for estimating the potency of antivenoms against Bothrops asper snake venom: Pathophysiological mechanisms, prophylactic analgesia, and a surrogate in vitro assay

(2015) Francisco Chacón et al.   TOXICON

Post-transcriptional Mechanisms Contribute Little to Phenotypic Variation in Snake Venoms

(2015) Darin R. Rokyta et al.   G3-Genes Genomes Genetics

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

RNA-seq and high-definition mass spectrometry reveal the complex and divergent venoms of two rear-fanged colubrid snakes

(2014) James J McGivern et al.   BMC GENOMICS

Functional Variability of Snake Venom Metalloproteinases: Adaptive Advantages in Targeting Different Prey and Implications for Human Envenomation

(2014) Juliana L. Bernardoni et al.   PLoS One

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

The genesis of an exceptionally lethal venom in the timber rattlesnake (Crotalus horridus) revealed through comparative venom-gland transcriptomics

(2013) Darin R Rokyta et al.   BMC GENOMICS

The venom-gland transcriptome of the eastern coral snake (Micrurus fulvius) reveals high venom complexity in the intragenomic evolution of venoms

(2013) Mark J Margres et al.   BMC GENOMICS

Integrated “omics” profiling indicates that miRNAs are modulators of the ontogenetic venom composition shift in the Central American rattlesnake, Crotalus simus simus

(2013) Jordi Durban et al.   BMC GENOMICS

Proteomic and functional profiling of the venom of Bothrops ayerbei from Cauca, Colombia, reveals striking interspecific variation with Bothrops asper venom

(2013) Diana Mora-Obando et al.   Journal of Proteomics

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Comparison of Phylogeny, Venom Composition and Neutralization by Antivenom in Diverse Species of Bothrops Complex

(2013) Leijiane F. Sousa et al.   PLoS Neglected Tropical Diseases

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

The venom-gland transcriptome of the eastern diamondback rattlesnake (Crotalus adamanteus)

(2012) Darin R Rokyta et al.   BMC GENOMICS

55. Intraspecific Variation of Biological Activities in Venoms from Wild and Captive Bothrops jararaca

(2012) Eduardo Saad et al.   TOXICON

Phospholipases A2: Unveiling the secrets of a functionally versatile group of snake venom toxins

(2012) José María Gutiérrez et al.   TOXICON

Complex cocktails: the evolutionary novelty of venoms

(2012) Nicholas R. Casewell et al.   TRENDS IN ECOLOGY & EVOLUTION

A Transcriptomic View of the Proteome Variability of Newborn and Adult Bothrops jararaca Snake Venoms

(2012) André Zelanis et al.   PLoS Neglected Tropical Diseases

ProtTest 3: fast selection of best-fit models of protein evolution

(2011) Diego Darriba et al.   BIOINFORMATICS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Proteomic analysis of ontogenetic and diet-related changes in venom composition of juvenile and adult Dusky Pigmy rattlesnakes (Sistrurus miliarius barbouri)

(2011) H. Lisle Gibbs et al.   Journal of Proteomics

Snake population venomics and antivenomics of Bothrops atrox: Paedomorphism along its transamazonian dispersal and implications of geographic venom variability on snakebite management

(2011) Juan J. Calvete et al.   Journal of Proteomics

Haemostatically active proteins in snake venoms

(2011) Tamara Sajevic et al.   TOXICON

Analysis of the Ontogenetic Variation in the Venom Proteome/Peptidome ofBothrops jararacaReveals Different Strategies to Deal with Prey

(2010) André Zelanis et al.   JOURNAL OF PROTEOME RESEARCH

Evolutionary trends in venom composition in the Western Rattlesnakes (Crotalus viridis sensu lato): Toxicity vs. tenderizers

(2010) Stephen P. Mackessy   TOXICON

The Toxicogenomic Multiverse: Convergent Recruitment of Proteins Into Animal Venoms

(2009) Bryan G. Fry et al.   Annual Review of Genomics and Human Genetics

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Regulation of Translation Initiation in Eukaryotes: Mechanisms and Biological Targets

(2009) Nahum Sonenberg et al.   CELL

Venoms, venomics, antivenomics

(2009) Juan J. Calvete et al.   FEBS LETTERS

Insights into and speculations about snake venom metalloproteinase (SVMP) synthesis, folding and disulfide bond formation and their contribution to venom complexity

(2008) Jay W. Fox et al.   FEBS Journal

Activation of leukocyte rolling by the cysteine-rich domain and the hyper-variable region of HF3, a snake venom hemorrhagic metalloproteinase

(2008) Milene C. Menezes et al.   FEBS LETTERS

Snake Venomics of the Lancehead PitviperBothrops asper: Geographic, Individual, and Ontogenetic Variations

(2008) Alberto Alape-Girón et al.   JOURNAL OF PROTEOME RESEARCH

Molecular characterization of BjussuSP-I, a new thrombin-like enzyme with procoagulant and kallikrein-like activity isolated from Bothrops jararacussu snake venom

(2007) Carolina D. Sant'Ana et al.   BIOCHIMIE