Mycoviral diversity and characteristics of a negative-stranded RNA virus LeNSRV1 in the edible mushroom Lentinula edodes

TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data

(2020) Chengjie Chen et al.   Molecular Plant

Two novel fungal negative-strand RNA viruses related to mymonaviruses and phenuiviruses in the shiitake mushroom (Lentinula edodes)

(2019) Yu-Hsin Lin et al.   VIROLOGY

PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

(2019) Dong Zhang et al.   Molecular Ecology Resources

Next generation sequencing analysis of double-stranded RNAs from sweet cherry powdery mildew fungus Podosphaera prunicola

(2018) Binod Pandey et al.   JOURNAL OF PLANT PATHOLOGY

Virome Characterization of a Collection of S. sclerotiorum from Australia

(2018) Fan Mu et al.   Frontiers in Microbiology

Molecular Characterization and Geographic Distribution of a Mymonavirus in the Population of Botrytis cinerea

(2018) Fangmin Hao et al.   Viruses-Basel

ICTV Virus Taxonomy Profile: Virgaviridae

(2017) Michael J. Adams et al.   JOURNAL OF GENERAL VIROLOGY

Biological and Molecular Characteristics of a Novel Partitivirus Infecting the Edible Fungus Lentinula edodes

(2017) Mengpei Guo et al.   PLANT DISEASE

Multiple viral infections in Agaricus bisporus - Characterisation of 18 unique RNA viruses and 8 ORFans identified by deep sequencing

(2017) Gregory Deakin et al.   Scientific Reports

Virus-mediated suppression of host non-self recognition facilitates horizontal transmission of heterologous viruses

(2017) Songsong Wu et al.   PLoS Pathogens

Genomoviridae: a new family of widespread single-stranded DNA viruses

(2016) Mart Krupovic et al.   ARCHIVES OF VIROLOGY

Identification of Diverse Mycoviruses through Metatranscriptomics Characterization of the Viromes of Five Major Fungal Plant Pathogens

(2016) Shin-Yi Lee Marzano et al.   JOURNAL OF VIROLOGY

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Engineering super mycovirus donor strains of chestnut blight fungus by systematic disruption of multilocusvicgenes

(2016) Dong-Xiu Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fungal DNA virus infects a mycophagous insect and utilizes it as a transmission vector

(2016) Si Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple virus infection in a single strain of Fusarium poae shown by deep sequencing

(2016) Hideki Osaki et al.   VIRUS GENES

Characterization of a new megabirnavirus that confers hypovirulence with the aid of a co-infecting partitivirus to the host fungus, Rosellinia necatrix

(2016) Atsuko Sasaki et al.   VIRUS RESEARCH

Using a Novel Partitivirus in Pseudogymnoascus destructans to Understand the Epidemiology of White-Nose Syndrome

(2016) Vaskar Thapa et al.   PLoS Pathogens

Karect: accurate correction of substitution, insertion and deletion errors for next-generation sequencing data

(2015) Amin Allam et al.   BIOINFORMATICS

Evaluating genetic diversity and constructing core collections of ChineseLentinula edodescultivars using ISSR and SRAP markers

(2015) Jun Liu et al.   JOURNAL OF BASIC MICROBIOLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Highly activated RNA silencing via strong induction of dicer by one virus can interfere with the replication of an unrelated virus

(2015) Sotaro Chiba et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

50-plus years of fungal viruses

(2015) Said A. Ghabrial et al.   VIROLOGY

New Insights into Mycoviruses and Exploration for the Biological Control of Crop Fungal Diseases

(2014) Jiatao Xie et al.   Annual Review of Phytopathology

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Fungal negative-stranded RNA virus that is related to bornaviruses and nyaviruses

(2014) L. Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Two viruses of Heterobasidion confer beneficial, cryptic or detrimental effects to their hosts in different situations

(2013) Rafiqul Hyder et al.   Fungal Ecology

Isolation and characterization of a mycovirus in Lentinula edodes

(2013) Hyo-Kyoung Won et al.   JOURNAL OF MICROBIOLOGY

PRICE: Software for the Targeted Assembly of Components of (Meta) Genomic Sequence Data

(2013) J. Graham Ruby et al.   G3-Genes Genomes Genetics

FastUniq: A Fast De Novo Duplicates Removal Tool for Paired Short Reads

(2012) Haibin Xu et al.   PLoS One

Evidence for negative-strand RNA virus infection in fungi

(2012) Hideki Kondo et al.   VIROLOGY

Molecular characterization of a novel mycovirus in the cultivated mushroom, Lentinula edodes.

(2012) Yumi Magae   Virology Journal

Molecular Characterization of Vegetative Incompatibility Genes That Restrict Hypovirus Transmission in the Chestnut Blight FungusCryphonectria parasitica

(2011) Gil H. Choi et al.   GENETICS

The presence of double-stranded RNAs in Alternaria alternata Japanese pear pathotype is associated with morphological changes

(2011) Kuko Fuke et al.   JOURNAL OF GENERAL PLANT PATHOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

A geminivirus-related DNA mycovirus that confers hypovirulence to a plant pathogenic fungus

(2010) X. Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Mycoviruses of filamentous fungi and their relevance to plant pathology

(2008) MICHAEL N. PEARSON et al.   MOLECULAR PLANT PATHOLOGY