Detection of candidate genes and development of KASP markers for Verticillium wilt resistance by combining genome-wide association study, QTL-seq and transcriptome sequencing in cotton

FIT, a regulatory hub for iron deficiency and stress signaling in roots, and FIT-dependent and -independent gene signatures

(2020) Birte Schwarz et al.   JOURNAL OF EXPERIMENTAL BOTANY

Ammonium mediated changes in carbon and nitrogen metabolisms induce resistance against Pseudomonas syringae in tomato plants

(2019) Ana Isabel González-Hernández et al.   JOURNAL OF PLANT PHYSIOLOGY

Flavonoid accumulation in spontaneous cotton mutant results in red coloration and enhanced disease resistance

(2019) Lu Long et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

A genome-wide association study uncovers consistent quantitative trait loci for resistance to Verticillium wilt and Fusarium wilt race 4 in the US Upland cotton

(2019) Abdelraheem Abdelraheem et al.   THEORETICAL AND APPLIED GENETICS

Evaluation and genome-wide association study of Verticillium wilt resistance in a MAGIC population derived from intermating of eleven Upland cotton (Gossypium hirsutum) parents

(2019) Jinfa Zhang et al.   EUPHYTICA

The bHLH transcription factor GmPIB1 facilitates resistance to Phytophthora sojae in Glycine max

(2018) Qun Cheng et al.   JOURNAL OF EXPERIMENTAL BOTANY

Evolutionary and functional analyses of the 2-oxoglutarate-dependent dioxygenase genes involved in the flavonoid biosynthesis pathway in tobacco

(2018) Zhong Wang et al.   PLANTA

Detoxification of polycyclic aromatic hydrocarbons (PAHs) in Arabidopsis thaliana involves a putative flavonol synthase

(2017) Juan C. Hernández-Vega et al.   JOURNAL OF HAZARDOUS MATERIALS

A meta-analysis of quantitative trait loci for abiotic and biotic stress resistance in tetraploid cotton

(2017) Abdelraheem Abdelraheem et al.   MOLECULAR GENETICS AND GENOMICS

A Phi-Class Glutathione S-Transferase Gene for Verticillium Wilt Resistance in Gossypium arboreum Identified in a Genome-Wide Association Study

(2017) Qian Gong et al.   PLANT AND CELL PHYSIOLOGY

Population structure and genetic basis of the agronomic traits of upland cotton in China revealed by a genome-wide association study using high-density SNPs

(2017) Cong Huang et al.   PLANT BIOTECHNOLOGY JOURNAL

Genome-wide association study discovered candidate genes of Verticillium wilt resistance in upland cotton (Gossypium hirsutum L.)

(2017) Tinggang Li et al.   PLANT BIOTECHNOLOGY JOURNAL

Development and validation of KASP markers for the greenbug resistance gene Gb7 and the Hessian fly resistance gene H32 in wheat

(2017) Chor-Tee Tan et al.   THEORETICAL AND APPLIED GENETICS

Quantitative Trait Locus Mapping for Verticillium wilt Resistance in an Upland Cotton Recombinant Inbred Line Using SNP-Based High Density Genetic Map

(2017) Koffi Kibalou Palanga et al.   Frontiers in Plant Science

Genetic diversity, linkage disequilibrium, and association mapping analyses of Gossypium barbadense L. germplasm

(2017) Alisher A. Abdullaev et al.   PLoS One

Quantitative trait loci analysis of Verticillium wilt resistance in interspecific backcross populations of Gossypium hirsutum × Gossypium barbadense

(2016) Yuzhen Shi et al.   BMC GENOMICS

Host-Induced Gene Silencing of the Target Gene in Fungal Cells Confers Effective Resistance to the Cotton Wilt Disease Pathogen Verticillium dahliae

(2016) Tao Zhang et al.   Molecular Plant

A genome-wide association study reveals novel elite allelic variations in seed oil content of Brassica napus

(2016) Sheng Liu et al.   THEORETICAL AND APPLIED GENETICS

Genetic analysis of Verticillium wilt resistance in a backcross inbred line population and a meta-analysis of quantitative trait loci for disease resistance in cotton

(2015) Jinfa Zhang et al.   BMC GENOMICS

Vitamin B6 contributes to disease resistance against Pseudomonas syringae pv. tomato DC3000 and Botrytis cinerea in Arabidopsis thaliana

(2015) Yafen Zhang et al.   JOURNAL OF PLANT PHYSIOLOGY

Genome-wide association mapping unravels the genetic control of seed germination and vigor in Brassica napus

(2015) Sarah V. Hatzig et al.   Frontiers in Plant Science

Genetics, Breeding, and Marker-Assisted Selection for Verticillium Wilt Resistance in Cotton

(2014) Jinfa Zhang et al.   CROP SCIENCE

Molecular confirmation of species status for the allopolyploid cotton species, Gossypium ekmanianum Wittmack

(2014) C. E. Grover et al.   GENETIC RESOURCES AND CROP EVOLUTION

The de novo Biosynthesis of Vitamin B6 Is Required for Disease Resistance Against Botrytis cinerea in Tomato

(2014) Yafen Zhang et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Genetic Structure, Linkage Disequilibrium and Association Mapping of Verticillium Wilt Resistance in Elite Cotton (Gossypium hirsutum L.) Germplasm Population

(2014) Yunlei Zhao et al.   PLoS One

Analysis of sea-island cotton and upland cotton in response to Verticillium dahliae infection by RNA sequencing

(2013) Quan Sun et al.   BMC GENOMICS

Molecular Tagging of a Major Quantitative Trait Locus for Broad-Spectrum Resistance to Verticillium Wilt in Upland Cotton Cultivar Prema

(2013) Ning Zhiyuan et al.   CROP SCIENCE

Quantitative trait locus mapping for Verticillium wilt resistance in a backcross inbred line population of cotton (Gossypium hirsutum × Gossypium barbadense) based on RGA-AFLP analysis

(2013) Hui Fang et al.   EUPHYTICA

Proteomic and Virus-induced Gene Silencing (VIGS) Analyses Reveal That Gossypol, Brassinosteroids, and Jasmonic acid Contribute to the Resistance of Cotton toVerticillium dahliae

(2013) Wei Gao et al.   MOLECULAR & CELLULAR PROTEOMICS

Quantitative trait locus analysis of Verticillium wilt resistance in an introgressed recombinant inbred population of Upland cotton

(2013) Hui Fang et al.   MOLECULAR BREEDING

Single nucleotide polymorphism genotyping using Kompetitive Allele Specific PCR (KASP): overview of the technology and its application in crop improvement

(2013) Kassa Semagn et al.   MOLECULAR BREEDING

QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations

(2013) Hiroki Takagi et al.   PLANT JOURNAL

The Maize AAA-Type Protein SKD1 Confers Enhanced Salt and Drought Stress Tolerance in Transgenic Tobacco by Interacting with Lyst-Interacting Protein 5

(2013) Zongliang Xia et al.   PLoS One

Comparative expression analysis in susceptible and resistant Gossypium hirsutum responding to Verticillium dahliae infection by cDNA-AFLP

(2012) Wen-Wei Zhang et al.   PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY

Germplasm evaluation and transfer of Verticillium wilt resistance from Pima (Gossypium barbadense) to Upland cotton (G. hirsutum)

(2011) Jinfa Zhang et al.   EUPHYTICA

Lignin metabolism has a central role in the resistance of cotton to the wilt fungus Verticillium dahliae as revealed by RNA-Seq-dependent transcriptional analysis and histochemistry

(2011) Li Xu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Variance component model to account for sample structure in genome-wide association studies

(2010) Hyun Min Kang et al.   NATURE GENETICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Molecular mapping of Verticillium wilt resistance QTL clustered on chromosomes D7 and D9 in upland cotton

(2009) Feng Jiang et al.   Science in China. Series C, Life sciences / Chinese Academy of Sciences

Linkage disequilibrium based association mapping of fiber quality traits in G. hirsutum L. variety germplasm

(2008) Ibrokhim Y. Abdurakhmonov et al.   GENETICA

Molecular diversity and association mapping of fiber quality traits in exotic G. hirsutum L. germplasm

(2008) I.Y. Abdurakhmonov et al.   GENOMICS

Mapping and Quantitative Trait Loci Analysis of Verticillium Wilt Resistance Genes in Cotton

(2008) Hong-Mei Wang et al.   Journal of Integrative Plant Biology

QTLs mapping for Verticillium wilt resistance at seedling and maturity stages in Gossypium barbadense L.

(2007) Chang Yang et al.   PLANT SCIENCE