Lignin metabolism has a central role in the resistance of cotton to the wilt fungus Verticillium dahliae as revealed by RNA-Seq-dependent transcriptional analysis and histochemistry

Selective lignin downregulation leads to constitutive defense response expression in alfalfa (Medicago sativa L.)

(2011) Lina Gallego-Giraldo et al.   NEW PHYTOLOGIST

Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana

(2010) Xiaoping Gou et al.   BMC GENOMICS

The Ve-mediated resistance response of the tomato to Verticillium dahliae involves H2O2, peroxidase and lignins and drives PAL gene expression

(2010) Carmen Gayoso et al.   BMC PLANT BIOLOGY

Dynamic regulation of alternative splicing and chromatin structure in Drosophila gonads revealed by RNA-seq

(2010) Qiang Gan et al.   CELL RESEARCH

New insights into the blood-stage transcriptome ofPlasmodium falciparumusing RNA-Seq

(2010) Thomas D. Otto et al.   MOLECULAR MICROBIOLOGY

Into the unknown: expression profiling without genome sequence information in CHO by next generation sequencing

(2010) Fabian Birzele et al.   NUCLEIC ACIDS RESEARCH

Characterization of Transcriptional Complexity during Berry Development in Vitis vinifera Using RNA-Seq

(2010) S. Zenoni et al.   PLANT PHYSIOLOGY

Plant Immunity: It's the Hormones Talking, But What Do They Say?

(2010) A. Verhage et al.   PLANT PHYSIOLOGY

Functional Analysis of the Arabidopsis PAL Gene Family in Plant Growth, Development, and Response to Environmental Stress

(2010) J. Huang et al.   PLANT PHYSIOLOGY

Comparative transcripts profiling reveals new insight into molecular processes regulating lycopene accumulation in a sweet orange (Citrus sinensis) red-flesh mutant

(2009) Qiang Xu et al.   BMC GENOMICS

The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments

(2009) S. A. Bustin et al.   CLINICAL CHEMISTRY

Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond

(2009) Ryan Lister et al.   CURRENT OPINION IN PLANT BIOLOGY

Next-generation tag sequencing for cancer gene expression profiling

(2009) A. S. Morrissy et al.   GENOME RESEARCH

The role of xylem class III peroxidases in lignification

(2009) K. Marjamaa et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptome Profiling in Hybrid Poplar Following Interactions withMelampsoraRust Fungi

(2009) Aïda Azaiez et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Real-Time Quantitative RT-PCR: Design, Calculations, and Statistics

(2009) I. Rieu et al.   PLANT CELL

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Global Gene Expression Profiling DuringMedicago truncatula–Phymatotrichopsis omnivoraInteraction Reveals a Role for Jasmonic Acid, Ethylene, and the Flavonoid Pathway in Disease Development

(2008) Srinivasa Rao Uppalapati et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Stem cell transcriptome profiling via massive-scale mRNA sequencing

(2008) Nicole Cloonan et al.   NATURE METHODS

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Role of plant hormones in plant defence responses

(2008) Rajendra Bari et al.   PLANT MOLECULAR BIOLOGY

Structure and function of enzymes involved in the biosynthesis of phenylpropanoids

(2008) J.-L. Ferrer et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

(2008) U. Nagalakshmi et al.   SCIENCE