Cyrius: accurate CYP2D6 genotyping using whole-genome sequencing data
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Cyrius: accurate CYP2D6 genotyping using whole-genome sequencing data
Authors
Keywords
-
Journal
PHARMACOGENOMICS JOURNAL
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-01-19
DOI
10.1038/s41397-020-00205-5
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Spinal muscular atrophy diagnosis and carrier screening from genome sequencing data
- (2020) Xiao Chen et al. GENETICS IN MEDICINE
- Added Value of Clinical Sequencing: WGS-Based Profiling of Pharmacogenes
- (2020) Sylvan M. Caspar et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- A systematic comparison of pharmacogene star allele calling bioinformatics algorithms: a focus on CYP2D6 genotyping
- (2020) David Twesigomwe et al. npj Genomic Medicine
- Calling Star Alleles With Stargazer in 28 Pharmacogenes With Whole Genome Sequences
- (2019) Seung‐been Lee et al. CLINICAL PHARMACOLOGY & THERAPEUTICS
- PharmVar GeneReview: CYP2D6
- (2019) Charity Nofziger et al. CLINICAL PHARMACOLOGY & THERAPEUTICS
- Interrogation of CYP2D6 structural variant alleles improves the correlation between CYP2D6 genotype and CYP2D6‐mediated metabolic activity
- (2019) Rachel Dalton et al. CTS-Clinical and Translational Science
- Characterization of Reference Materials for Genetic Testing of CYP2D6 Alleles
- (2019) Andrea Gaedigk et al. JOURNAL OF MOLECULAR DIAGNOSTICS
- Results and challenges of Cytochrome P450 2D6 ( CYP2D6 ) testing in an ethnically diverse South Florida population
- (2019) Daria Salyakina et al. Molecular Genetics & Genomic Medicine
- Standardizing CYP 2D6 Genotype to Phenotype Translation: Consensus Recommendations from the Clinical Pharmacogenetics Implementation Consortium and Dutch Pharmacogenetics Working Group
- (2019) Kelly E. Caudle et al. CTS-Clinical and Translational Science
- Stargazer: a software tool for calling star alleles from next-generation sequencing data using CYP2D6 as a model
- (2018) Seung-been Lee et al. GENETICS IN MEDICINE
- Accurately genotyping CYP2D6: not for the faint of heart
- (2018) Charity Nofziger et al. PHARMACOGENOMICS
- Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes
- (2018) Ibrahim Numanagić et al. Nature Communications
- The 100 000 Genomes Project: bringing whole genome sequencing to the NHS
- (2018) Clare Turnbull et al. BMJ-British Medical Journal
- The 100 000 Genomes Project: bringing whole genome sequencing to the NHS
- (2018) Clare Turnbull et al. BMJ-British Medical Journal
- Frequency of CYP2D6 Alleles Including Structural Variants in the United States
- (2018) Andria L. Del Tredici et al. Frontiers in Pharmacology
- CYP2D6 allele frequencies, copy number variants, and tandems in the population of Hong Kong
- (2018) Wing Chan et al. JOURNAL OF CLINICAL LABORATORY ANALYSIS
- Integrated CYP2D6 interrogation for multiethnic copy number and tandem allele detection
- (2018) Wanqiong Qiao et al. PHARMACOGENOMICS
- Detection of long repeat expansions from PCR-free whole-genome sequence data
- (2017) Egor Dolzhenko et al. GENOME RESEARCH
- Systematic evaluation of commercial pharmacogenetic testing in psychiatry
- (2017) Chad A. Bousman et al. Pharmacogenetics and Genomics
- Sequencing the CYP2D6 gene: from variant allele discovery to clinical pharmacogenetic testing
- (2017) Yao Yang et al. PHARMACOGENOMICS
- Prediction of CYP2D6 phenotype from genotype across world populations
- (2016) Andrea Gaedigk et al. GENETICS IN MEDICINE
- Characterization of 137 Genomic DNA Reference Materials for 28 Pharmacogenetic Genes
- (2016) Victoria M. Pratt et al. JOURNAL OF MOLECULAR DIAGNOSTICS
- PGRNseq
- (2016) Adam S. Gordon et al. Pharmacogenetics and Genomics
- Constellation: a tool for rapid, automated phenotype assignment of a highly polymorphic pharmacogene, CYP2D6, from whole-genome sequences
- (2016) Greyson P Twist et al. npj Genomic Medicine
- svviz: a read viewer for validating structural variants
- (2015) Noah Spies et al. BIOINFORMATICS
- Cypiripi: exact genotyping ofCYP2D6using high-throughput sequencing data
- (2015) Ibrahim Numanagić et al. BIOINFORMATICS
- Long-Read Single Molecule Real-Time Full Gene Sequencing of Cytochrome P450-2D6
- (2015) Wanqiong Qiao et al. HUMAN MUTATION
- The Precision Medicine Initiative
- (2015) Euan A. Ashley JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- A global reference for human genetic variation
- (2015) Richard A. Gibbs et al. NATURE
- Whole-genome sequence variation, population structure and demographic history of the Dutch population
- (2014) Laurent C Francioli et al. NATURE GENETICS
- Isaac: ultra-fast whole-genome secondary analysis on Illumina sequencing platforms
- (2013) Come Raczy et al. BIOINFORMATICS
- Pharmacogenomics Knowledge for Personalized Medicine
- (2012) M Whirl-Carrillo et al. CLINICAL PHARMACOLOGY & THERAPEUTICS
- Copy number variation and gene rearrangements inCYP2D6genotyping using multiplex ligation-dependent probe amplification in Koreans
- (2012) Juwon Kim et al. PHARMACOGENOMICS
- CYP2D6,SULT1A1andUGT2B17copy number variation: quantitative detection by multiplex PCR
- (2011) Andrea Gaedigk et al. PHARMACOGENOMICS
- Limited effects of frequent CYP2D6*36-*10 tandem duplication allele on in vivo dextromethorphan metabolism in a Japanese population
- (2010) Kazuma Kiyotani et al. EUROPEAN JOURNAL OF CLINICAL PHARMACOLOGY
- CYP2D6 Genotyping for Functional-Gene Dosage Analysis by Allele Copy Number Detection
- (2009) N. Hosono et al. CLINICAL CHEMISTRY
- Polymorphism of Human Cytochrome P450 2D6 and Its Clinical Significance
- (2009) Shu-Feng Zhou CLINICAL PHARMACOKINETICS
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started