Durum wheat genome highlights past domestication signatures and future improvement targets

Targeted resequencing reveals genomic signatures of barley domestication

(2018) Artem Pankin et al.   NEW PHYTOLOGIST

Shifting the limits in wheat research and breeding using a fully annotated reference genome

(2018) et al.   SCIENCE

A chromosome conformation capture ordered sequence of the barley genome

(2017) Martin Mascher et al.   NATURE

Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits

(2017) Rajeev K Varshney et al.   NATURE GENETICS

The pangenome of hexaploid bread wheat

(2017) Juan D. Montenegro et al.   PLANT JOURNAL

Identification and characterization ofSr13, a tetraploid wheat gene that confers resistance to the Ug99 stem rust race group

(2017) Wenjun Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Wild emmer genome architecture and diversity elucidate wheat evolution and domestication

(2017) Raz Avni et al.   SCIENCE

Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.

(2017) Sebastian Beier et al.   Scientific Data

A loss-of-function allele ofOsHMA3associated with high cadmium accumulation in shoots and grain ofJaponicarice cultivars

(2016) Jiali Yan et al.   PLANT CELL AND ENVIRONMENT

Evolution Is an Experiment: Assessing Parallelism in Crop Domestication and Experimental Evolution

(2015) Brandon S. Gaut   MOLECULAR BIOLOGY AND EVOLUTION

Genomics of crop wild relatives: expanding the gene pool for crop improvement

(2015) Marta Brozynska et al.   PLANT BIOTECHNOLOGY JOURNAL

A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome

(2015) Jarrod A Chapman et al.   GENOME BIOLOGY

Map-based analysis of the tenacious glume gene Tg-B1 of wild emmer and its role in wheat domestication

(2014) Justin D. Faris et al.   GENE

Fast and Efficient Estimation of Individual Ancestry Coefficients

(2014) Eric Frichot et al.   GENETICS

Ultra-dense genetic map of durum wheat × wild emmer wheat developed using the 90K iSelect SNP genotyping assay

(2014) Raz Avni et al.   MOLECULAR BREEDING

A high-density, SNP-based consensus map of tetraploid wheat as a bridge to integrate durum and bread wheat genomics and breeding

(2014) Marco Maccaferri et al.   PLANT BIOTECHNOLOGY JOURNAL

Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array

(2014) Shichen Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

The past, present and future of breeding rust resistant wheat

(2014) Jeffrey G. Ellis et al.   Frontiers in Plant Science

Cadmium uptake and partitioning in durum wheat during grain filling

(2013) Neil S Harris et al.   BMC PLANT BIOLOGY

Detecting Signatures of Selection Through Haplotype Differentiation Among Hierarchically Structured Populations

(2013) M. I. Fariello et al.   GENETICS

Inference of Population Structure using Dense Haplotype Data

(2012) Daniel John Lawson et al.   PLoS Genetics

Genome architectures revealed by tethered chromosome conformation capture and population-based modeling

(2011) Reza Kalhor et al.   NATURE BIOTECHNOLOGY

Targeted analysis of nucleotide and copy number variation by exon capture in allotetraploid wheat genome

(2011) Cyrille Saintenac et al.   GENOME BIOLOGY

Discriminant analysis of principal components: a new method for the analysis of genetically structured populations

(2010) Thibaut Jombart et al.   BMC GENETICS

Population differentiation as a test for selective sweeps

(2010) H. Chen et al.   GENOME RESEARCH

OsHMA3, a P1B-type of ATPase affects root-to-shoot cadmium translocation in rice by mediating efflux into vacuoles

(2010) Hidenori Miyadate et al.   NEW PHYTOLOGIST

Gene limiting cadmium accumulation in rice

(2010) D. Ueno et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Targeted mapping of Cdu1, a major locus regulating grain cadmium concentration in durum wheat (Triticum turgidum L. var durum)

(2010) K. Wiebe et al.   THEORETICAL AND APPLIED GENETICS

Chromosomal location of the cadmium uptake gene (Cdu1) in durum wheat

(2009) R. E. Knox et al.   GENOME

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

Allelic variants of phytoene synthase 1 (Psy1) genes in Chinese and CIMMYT wheat cultivars and development of functional markers for flour colour

(2009) X. Y. He et al.   MOLECULAR BREEDING

Genetics in geographically structured populations: defining, estimating and interpreting FST

(2009) Kent E. Holsinger et al.   NATURE REVIEWS GENETICS

A major QTL for durable leaf rust resistance widely exploited in durum wheat breeding programs maps on the distal region of chromosome arm 7BL

(2008) M. Maccaferri et al.   THEORETICAL AND APPLIED GENETICS